Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00288
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 151 2e-36
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 151 2e-36
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 151 2e-36
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 151 2e-36
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 151 2e-36
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 151 2e-36
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 151 2e-36
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 151 2e-36
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 151 2e-36
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 151 2e-36
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 145 1e-34
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 145 1e-34
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 145 1e-34
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 145 1e-34
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 145 1e-34
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 145 1e-34
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 140 5e-33
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 7e-25
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.6
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.7
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 8.5
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 56 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 115
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 116 GIPHLVTHDARTIRYPDPLIKVNDTI 141
Score = 99.5 bits (237), Expect = 9e-21
Identities = 47/57 (82%), Positives = 51/57 (89%)
Frame = +1
Query: 85 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGK 255
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGK
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 56
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 131 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 174
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 170 LGRIGVITNRERHPGSFDVVHVKD 193
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 55 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 114
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 115 GIPHLVTHDARTIRYPDPLIKVNDTI 140
Score = 102 bits (244), Expect = 1e-21
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +1
Query: 91 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGK 255
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGK
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGK 55
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 130 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 173
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 169 LGRIGVITNRERHPGSFDVVHVKD 192
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 137 bits (331), Expect = 4e-32
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 151 bits (366), Expect = 2e-36
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND+I
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTI 160
Score = 139 bits (336), Expect = 9e-33
Identities = 63/75 (84%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 150 PDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRIGVITNRERHPGSFDVVHVKD 212
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDP+IKVND++
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTV 160
Score = 138 bits (335), Expect = 1e-32
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 150 PDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKD 212
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 145 bits (352), Expect = 1e-34
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 74 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 133
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDP+IKVND++
Sbjct: 134 GIPHLVTHDARTIRYPDPVIKVNDTV 159
Score = 136 bits (330), Expect = 5e-32
Identities = 61/74 (82%), Positives = 67/74 (90%)
Frame = +1
Query: 34 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 213
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 214 LKIVKQRLIKVDGK 255
KI QR IK+DGK
Sbjct: 61 KKICMQRFIKIDGK 74
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 149 PDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 192
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 188 LGRVGVITNRERHPGSFDVVHVKD 211
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDP+IKVND++
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTV 160
Score = 138 bits (335), Expect = 1e-32
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 150 PDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKD 212
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDP+IKVND++
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTV 160
Score = 138 bits (335), Expect = 1e-32
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 150 PDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKD 212
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDP+IKVND++
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTV 160
Score = 138 bits (335), Expect = 1e-32
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 150 PDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 40.3 bits (90), Expect = 0.006
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSF +VH+KD
Sbjct: 189 LGRVGVITNRERHPGSFGVVHVKD 212
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 145 bits (352), Expect = 1e-34
Identities = 62/86 (72%), Positives = 74/86 (86%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDP+IKVND++
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTV 160
Score = 138 bits (335), Expect = 1e-32
Identities = 62/75 (82%), Positives = 68/75 (90%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI QR IK+DGK
Sbjct: 61 VKKICMQRFIKIDGK 75
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 150 PDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVG 193
Score = 43.2 bits (97), Expect = 9e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGSFD+VH+KD
Sbjct: 189 LGRVGVITNRERHPGSFDVVHVKD 212
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 140 bits (338), Expect = 5e-33
Identities = 60/86 (69%), Positives = 73/86 (84%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
+P+LVTHD RTIRYPDPLIKVND++
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTV 160
Score = 136 bits (328), Expect = 9e-32
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KI Q +K+DGK
Sbjct: 61 VKKICMQHFLKIDGK 75
Score = 51.2 bits (117), Expect = 3e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVG 607
P P + Q+D+ T KI FIKF++GN+CM+ G NLGRVG
Sbjct: 150 PDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVG 193
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G I +RERHPGS D+VH+KD
Sbjct: 189 LGRVGVITNRERHPGSCDVVHVKD 212
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 7e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 198
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 270 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 416
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 270 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 416
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 8.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 261 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 425
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,371,398
Number of Sequences: 237096
Number of extensions: 2338141
Number of successful extensions: 14855
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14854
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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