Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00288
(664 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 151 8e-37
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 151 8e-37
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 151 8e-37
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 151 8e-37
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 30 3.2
AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 30 3.2
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 30 3.2
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 7.5
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 7.5
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 7.5
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
VP+LVTHDGRTIRYPDPLI NDS+
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIHANDSV 160
Score = 136 bits (329), Expect = 3e-32
Identities = 64/75 (85%), Positives = 67/75 (89%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KIV QRL+KV GK
Sbjct: 61 VTKIVMQRLVKVYGK 75
Score = 65.7 bits (153), Expect = 5e-11
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 610
P P + Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
VP+LVTHDGRTIRYPDPLI NDS+
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIHANDSV 160
Score = 142 bits (343), Expect = 5e-34
Identities = 66/75 (88%), Positives = 69/75 (92%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KIV QRL+KVDGK
Sbjct: 61 VTKIVMQRLVKVDGK 75
Score = 65.7 bits (153), Expect = 5e-11
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 610
P P + Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
VP+LVTHDGRTIRYPDPLI NDS+
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIHANDSV 160
Score = 142 bits (343), Expect = 5e-34
Identities = 66/75 (88%), Positives = 69/75 (92%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KIV QRL+KVDGK
Sbjct: 61 VTKIVMQRLVKVDGK 75
Score = 65.7 bits (153), Expect = 5e-11
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 610
P P + Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 151 bits (366), Expect = 8e-37
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +3
Query: 252 EVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 431
+VRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 432 NVPYLVTHDGRTIRYPDPLIKVNDSI 509
VP+LVTHDGRTIRYPDPLI NDS+
Sbjct: 135 GVPFLVTHDGRTIRYPDPLIHANDSV 160
Score = 142 bits (343), Expect = 5e-34
Identities = 66/75 (88%), Positives = 69/75 (92%)
Frame = +1
Query: 31 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 210
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 211 VLKIVKQRLIKVDGK 255
V KIV QRL+KVDGK
Sbjct: 61 VTKIVMQRLVKVDGK 75
Score = 65.7 bits (153), Expect = 5e-11
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +2
Query: 476 PRPTYQSQRFHQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 610
P P + Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT
Sbjct: 150 PDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGT 194
Score = 45.6 bits (103), Expect = 6e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +1
Query: 592 LGACGHIVSRERHPGSFDIVHIKD 663
LG G +V+RERHPGSFDIVHIKD
Sbjct: 189 LGRVGTVVNRERHPGSFDIVHIKD 212
>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 66 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 242
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p
protein.
Length = 561
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 66 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 242
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 18 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74
>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 66 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 242
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 467 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 309
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 467 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 309
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 467 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 309
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,240,771
Number of Sequences: 53049
Number of extensions: 732202
Number of successful extensions: 1985
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1985
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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