Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00287
(504 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 51 6e-07
11_04_0392 + 17131839-17131943,17134182-17134258,17134385-171344... 48 6e-06
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 46 1e-05
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 46 2e-05
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 46 2e-05
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657... 44 5e-05
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 44 5e-05
10_02_0078 - 4992019-4992594,4993156-4993248,4995984-4996202,499... 43 1e-04
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 40 0.001
08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316 40 0.002
09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416 36 0.014
09_06_0070 - 20670387-20670473,20672418-20672645,20673388-206735... 33 0.099
12_01_0375 + 2930807-2930838,2930936-2930999,2931127-2931333,293... 33 0.13
11_01_0354 + 2665570-2665601,2665796-2665894,2667158-2667202,266... 33 0.13
05_06_0138 + 25946545-25946632,25946715-25947489,25947627-259479... 29 2.8
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 28 3.7
01_05_0148 + 18609853-18610058,18610347-18612669 28 3.7
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 28 4.9
07_01_0414 + 3157096-3157674 28 4.9
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 27 6.5
09_04_0080 + 14393797-14393894,14395100-14395202,14395307-143954... 27 8.6
08_01_0789 + 7640021-7640382,7643435-7643480,7644514-7644638,764... 27 8.6
05_05_0391 - 24617389-24617508,24617854-24617919,24618156-246182... 27 8.6
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 27 8.6
03_02_0735 + 10811326-10812342,10813199-10813555,10813962-108142... 27 8.6
>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 50.8 bits (116), Expect = 6e-07
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +2
Query: 128 LICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 253
L+ I +YP Y SM+A+ESP DD +WLTYWV+Y+ ++
Sbjct: 897 LVGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITL 938
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 274 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQ 396
++ WFPL+ +K +F W LP +NG+ IY +R Y++
Sbjct: 946 VLQWFPLWPYMKLLFCCWLVLPI-FNGAAYIYETHVRRYFK 985
>11_04_0392 +
17131839-17131943,17134182-17134258,17134385-17134411,
17134512-17134634,17134738-17134981,17135081-17135098
Length = 197
Score = 47.6 bits (108), Expect = 6e-06
Identities = 16/38 (42%), Positives = 28/38 (73%)
Frame = +2
Query: 140 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 253
++ +YP Y S++A+ESP K DD +WL YW++Y+ ++
Sbjct: 63 TVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITL 100
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKH 402
E + ++ W P+++ LK +F+ W LP + G+ IY R +R +KH
Sbjct: 102 EMLLESLIYWIPIWYELKLLFIAWLALP-NFRGAAFIYNRFVREQLRKH 149
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/65 (30%), Positives = 37/65 (56%)
Frame = +1
Query: 244 FFYREYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDM 423
F E F+D I+ P Y+ +K ++W P+ +G+ +Y R +RP++ KH +ID +
Sbjct: 68 FSIAEIFADQILSSVPFYYHVKFAILVWLQFPSN-SGAKHVYRRYMRPFFLKHQAKIDRI 126
Query: 424 ANTVA 438
N ++
Sbjct: 127 LNILS 131
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 140 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIGSTF--PISSSAGFH 292
+IG P Y + +A+E + + +WL YW Y FSI F I SS F+
Sbjct: 33 AIGVGLPVYSTFRAIEKKDQKEKERWLLYWAAYGSFSIAEIFADQILSSVPFY 85
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 46.0 bits (104), Expect = 2e-05
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 143 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 253
+ YP Y S+KA+E+ DD +WLTYWV+Y+ ++
Sbjct: 22 VALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITL 58
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 274 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKH 402
I+ W P + +K IF+ W LP +NG+ +Y +RP + KH
Sbjct: 66 IIQWLPFWPSMKLIFICWLVLP-YFNGAAFVYQNYVRPMFVKH 107
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +1
Query: 235 VRLFFYREYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRI 414
V L E F DF + W P Y K +F I+ + P + G+ IY RPY +H I
Sbjct: 100 VALMTVMERFGDFTISWLPFYSEAKLMFFIYLWYP-KTKGTTYIYGTFFRPYISQHENEI 158
Query: 415 D 417
D
Sbjct: 159 D 159
>06_01_0865 -
6571056-6571190,6571737-6571977,6572279-6572401,
6572501-6572527,6573954-6574009
Length = 193
Score = 44.4 bits (100), Expect = 5e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 143 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 253
+ YP Y S++A+E+ DD +WLTYWV+Y+ ++
Sbjct: 22 VSLAYPLYASVRAIETKSPVDDQQWLTYWVLYSFITL 58
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 44.4 bits (100), Expect = 5e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 143 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSI 253
+ YP Y S++A+E+ DD +WLTYWV+Y+ ++
Sbjct: 24 VSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITL 60
>10_02_0078 -
4992019-4992594,4993156-4993248,4995984-4996202,
4996282-4996345,4996429-4996485,4996573-4996671,
4997296-4997327
Length = 379
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 235 VRLFFYREYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRI 414
V L E F DF + W PLY K +F I+ + P G+ +Y RPY ++ I
Sbjct: 47 VALLTVLERFGDFAISWLPLYSEAKLMFFIYLWCP-RTKGTSYVYETFFRPYISQYENDI 105
Query: 415 D 417
D
Sbjct: 106 D 106
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPT--EYNGSLVIYYRIIRPYYQKHHGRID 417
E D V W P+Y K F+++ + P + G+ +Y +PY KH ID
Sbjct: 54 ERVGDNFVSWLPMYSEAKLAFIVYLWYPKTQHFQGTSYVYESFFKPYIGKHEAEID 109
>08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316
Length = 127
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGR 411
E ++ ++ W P+++ +K +FV W LP ++ G+ IY +++R +K+ R
Sbjct: 26 EMVAEPVLYWIPVWYPVKVLFVAWLVLP-QFKGASFIYKKLVREQLRKYRAR 76
Score = 35.1 bits (77), Expect = 0.032
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 182 LESPQKDDDTKWLTYWVVYACFSI 253
+ESP K DD +WL YW++Y+ ++
Sbjct: 1 MESPTKVDDEQWLAYWILYSFITL 24
>09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416
Length = 98
Score = 36.3 bits (80), Expect = 0.014
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 274 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDD 420
++ W PL++ K +FV W LP ++ G+ IY + +R +K+ ++ +
Sbjct: 32 VLYWIPLWYEAKVLFVAWLVLP-QFRGASFIYDKFVREQLKKNRVKLHE 79
Score = 32.7 bits (71), Expect = 0.17
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 182 LESPQKDDDTKWLTYWVVYACFSI 253
+ES K DD +WL YW++Y+ ++
Sbjct: 1 MESTSKVDDEQWLVYWILYSLITL 24
>09_06_0070 -
20670387-20670473,20672418-20672645,20673388-20673508,
20673604-20673702,20673802-20673833
Length = 188
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 143 IGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYA 241
+G+ YPAY K LE PQ D W YW++ A
Sbjct: 14 LGYAYPAYDCYKTLELNKPQIDQLRFWCQYWILLA 48
Score = 32.3 bits (70), Expect = 0.23
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 417
E + F V W P+Y K V++ + P + G+ +Y ++P +H ID
Sbjct: 54 ETITYFTVSWLPMYGEAKLALVLYLWYP-KTRGAKHVYESYLQPVLARHEADID 106
>12_01_0375 +
2930807-2930838,2930936-2930999,2931127-2931333,
2932385-2932458,2932831-2932858,2933268-2933456
Length = 197
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 274 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 417
++ W P+Y +K F ++ + P + GS V+Y +RP ++ I+
Sbjct: 8 LISWMPMYGEIKLAFFVYLWYP-KTKGSDVVYDTFLRPIVMQYEPNIE 54
>11_01_0354 +
2665570-2665601,2665796-2665894,2667158-2667202,
2667293-2667356,2667497-2667709,2669960-2670160
Length = 217
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 277 VGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 417
V W P+Y +K F ++ + P + GS V+Y IRP ++ I+
Sbjct: 57 VSWMPMYGEIKLAFFVYLWYP-KTKGSDVVYDSFIRPTVMQYEPNIE 102
>05_06_0138 +
25946545-25946632,25946715-25947489,25947627-25947910,
25948100-25948238,25948323-25948394,25948477-25948548,
25948726-25948806,25948894-25949054,25949162-25949424,
25949661-25949787,25949974-25950042,25950154-25950346,
25950446-25950860
Length = 912
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1
Query: 501 WTWQHADRQWS*IEQAGHDQPSYCVGHIIDTTMVLLVVRTNDTVVDHQGPVVFSRQVAPD 322
W W + +WS I A D+ + + D V V++T T + P+ FS P+
Sbjct: 226 WPWSNPPAEWSDISTA--DKVQNTIAPVFDVPSV--VMQTAITTRNSSIPIQFSWDTKPN 281
Query: 321 H 319
H
Sbjct: 282 H 282
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 262 FSDFIVGWFPLYWLLKCIFVI 324
+S+ IV WFP++ CIFVI
Sbjct: 84 YSNGIVQWFPVFEYWSCIFVI 104
>01_05_0148 + 18609853-18610058,18610347-18612669
Length = 842
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 365 ITRDPLYSVGR*HQITKMHFNSQYNGNQ 282
+ DPL S+ R +T++HF YNG +
Sbjct: 714 LKEDPLPSLSRLLNLTELHFTRAYNGEK 741
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 300 PVQWKPADDEIGKVLPIEKQAYTTQYVSH 214
P+ WK AD+ IG +P + ++ +T+ SH
Sbjct: 160 PIVWKAADEMIGVPVPRKARSASTKRSSH 188
>07_01_0414 + 3157096-3157674
Length = 192
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 465 IEQAGHDQPSYCVGHIIDTTMVLLVVRTNDTVVDHQGPVVFSRQVAPDHEDA 310
+E AG ++ S V + T L R D D+ PV+ + Q DH DA
Sbjct: 80 VEAAGKEEGSDMVERCFEVTANLK--RCMDAHADYYAPVLRAEQAVNDHADA 129
>03_05_0530 -
25306788-25306919,25307446-25308037,25308152-25308975,
25309533-25309592,25310115-25310180,25310318-25310461,
25310616-25310756,25310898-25311056,25311818-25311884,
25311986-25312158,25312237-25312333,25312410-25312528,
25312867-25312951,25313120-25313321,25314456-25314633
Length = 1012
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -3
Query: 340 SAGSTRSRRCTLTASTMETSRR*NRKSTPDRKTGVHHPICKPFCIVILLRRLQSLHRHVR 161
SAGST+ L+A+ +R DR+ GVH + I L + H++VR
Sbjct: 461 SAGSTKMMAGILSANLEWRGMDESRHMAADRRLGVHFLVDHCNVIKKELLSVDPFHQYVR 520
Query: 160 G 158
G
Sbjct: 521 G 521
>09_04_0080 +
14393797-14393894,14395100-14395202,14395307-14395427,
14396208-14396287,14396702-14396878,14396992-14397215,
14397881-14397887,14398807-14398888,14399188-14399384
Length = 362
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 379 IRPYYQKHHGRIDDMANTVAWLVVTRLFNLRPLAVRMLPR 498
I+ YQ AN WL+VTR N PL +R+ R
Sbjct: 116 IKVRYQHLQDPETPRANLEEWLLVTRTANPDPLCIRLSGR 155
>08_01_0789 +
7640021-7640382,7643435-7643480,7644514-7644638,
7645028-7645092,7647642-7648186
Length = 380
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 283 WFPLYWLLKCIFVIWCYL--PTEYNGSLVIYYRIIRPYYQKHHGRIDDMANTVAWLVVTR 456
W P+ +L + V+W YL P +Y + +Y +R ++ R T A +V +
Sbjct: 250 WIPVILILVAVTVLWIYLYPPQDYTYPVRDWYP-VRDWFPAEPARELTDEETAARVVFRQ 308
Query: 457 LFNLRPLAVR 486
+ + P R
Sbjct: 309 ILSTPPFPSR 318
>05_05_0391 -
24617389-24617508,24617854-24617919,24618156-24618204,
24618855-24618922,24619041-24619086,24619187-24619280,
24619373-24619435,24619722-24619844,24620370-24620403,
24621106-24621168,24621447-24621545,24622398-24622454
Length = 293
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 217 AYILGGVRLFFYREYFSDFIVGWFPLYWLLKCIFVIW 327
AY+L L+ S GWF L++L+ IF +W
Sbjct: 165 AYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVW 201
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 357 PGDLLPYHSSLLPEAPWSYR*YGQHSSLVGRDPPVQSTTTGGPH 488
PG + P + L P P+ YG H + + PP+ GPH
Sbjct: 1184 PGSMNPSVAQLQPP-PFCNSGYGGHPNQMPPPPPIAPLNPPGPH 1226
>03_02_0735 +
10811326-10812342,10813199-10813555,10813962-10814225,
10814894-10815010,10815796-10815944,10816315-10816606,
10816681-10816845,10817106-10817357
Length = 870
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 186 SRRRRMTIQNGLHIGWCTPVFLSGVLFRFHRRLVSIVLAVKVHLRDLVLPA-D*IQRVPG 362
+R R I L + WC + +LFR + VS+VL ++ DL++P +QR
Sbjct: 516 ARSRNDQIVTDLRL-WCRDA-IDKILFRIKQFQVSLVLLASKYV-DLIVPGYTHLQRAQP 572
Query: 363 DLLPY 377
LLP+
Sbjct: 573 VLLPH 577
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,679,938
Number of Sequences: 37544
Number of extensions: 352592
Number of successful extensions: 963
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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