Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00287
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical ... 110 5e-25
Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical... 72 3e-13
U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical ... 41 6e-04
L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical pr... 32 0.21
AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical ... 31 0.47
Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm rec... 29 2.5
AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical ... 28 3.3
Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 28 4.4
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 28 4.4
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical... 28 4.4
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ... 28 4.4
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 27 7.7
AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical ... 27 7.7
>AC024201-6|AAF36016.1| 183|Caenorhabditis elegans Hypothetical
protein Y71F9B.3 protein.
Length = 183
Score = 110 bits (265), Expect = 5e-25
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = +2
Query: 17 TKYFELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ 196
T EQK GV R+++ LG+V LYL+FG A+L+CN +GFVYPAYMS+KA+ES
Sbjct: 25 TNVLATVEQKTGVKRLHLVLGVVGLQALYLIFGHSAQLVCNFMGFVYPAYMSIKAIESSN 84
Query: 197 KDDDTKWLTYWVVYACFSIGSTFPISSSAGF 289
K+DDT+WLTYWV++A S+ F + A F
Sbjct: 85 KEDDTQWLTYWVIFAILSVVEFFSVQIVAVF 115
Score = 56.8 bits (131), Expect = 8e-09
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 417
E+FS IV FP+YWL K IF+++ YLP+ + G+ +Y+R ++P +H G ID
Sbjct: 105 EFFSVQIVAVFPVYWLFKSIFLLYLYLPS-FLGAAKLYHRFVKPVAARHSGSID 157
>Z81113-6|CAD21647.2| 295|Caenorhabditis elegans Hypothetical
protein T03F6.6 protein.
Length = 295
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +2
Query: 38 EQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKW 217
E G+ R + GL+ +Y++ G GAE +CN IG YPAY+S+KA+ + DDDT W
Sbjct: 49 EDATGLKREMLAYGLIGLNCVYMIIGSGAEFVCNLIGVAYPAYVSVKAIRTEGTDDDTMW 108
Query: 218 LTYWVVYACFSIGSTFPISSSAGF 289
L YW V+ FSI F S + F
Sbjct: 109 LIYWTVFGAFSIIDFFAASIMSYF 132
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/45 (42%), Positives = 34/45 (75%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 390
++F+ I+ +FP+YW+ K F+++ YLP E +GS VIY+++I P+
Sbjct: 122 DFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHVIYHQLIDPF 165
>AF045646-11|AAK29829.1| 205|Caenorhabditis elegans Hypothetical
protein F56B3.6 protein.
Length = 205
Score = 71.7 bits (168), Expect = 3e-13
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = +2
Query: 65 YIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYA 241
Y GL+AF +LVFG A L+CN IGF YP Y S+KA+ SP DDDT WL YW +A
Sbjct: 84 YAAFGLIAF---FLVFGSVARLLCNLIGFGYPTYASVKAIRSPGGDDDTVWLIYWTCFA 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +1
Query: 256 EYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 387
++FS+ I+ WFP Y++ K F+++ YLP + GS++ Y I+ P
Sbjct: 145 DFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDP 187
>U28412-5|AAC46595.1| 229|Caenorhabditis elegans Hypothetical
protein T19C3.4 protein.
Length = 229
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 122 AELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFS 250
+ L+ + G +YPAY S KA+ + + KW+ YW+V+A +S
Sbjct: 6 SRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYS 48
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 241 LFFYREYFSDFIVG-WFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 417
++ + E D ++ WFP Y+ LK +F+ W P G+ ++Y + + P +H ID
Sbjct: 46 IYSFLENLLDLVLAFWFPFYFQLKIVFIFWLLSPWT-KGASILYRKWVHPTLNRHEKDID 104
>AL110490-5|CAB54441.1| 424|Caenorhabditis elegans Hypothetical
protein Y48B6A.5 protein.
Length = 424
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 68 IFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQ--KDDDTKWLTYWVVYA 241
IF+ + LYL+ G A+++C ++ V PA S K L +P+ K+ L YW +Y
Sbjct: 74 IFVMTMISVALYLIEGEHAQVVCTALTSVPPAIFSYKVLMNPKSSKEGYHSILFYWTLYG 133
Query: 242 CFSIGSTFPISSSAGFH 292
++ F I S G++
Sbjct: 134 ILAVIDQF-IGSPQGYN 149
>L16559-7|AAA27930.1| 161|Caenorhabditis elegans Hypothetical
protein C06E1.1 protein.
Length = 161
Score = 32.3 bits (70), Expect = 0.21
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +2
Query: 20 KYFELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQK 199
K F AE+ G+ R I +Y++ G L + I +P S L QK
Sbjct: 27 KTFTQAEKFSGIPRERIVSMAFLMLSIYVLLGNFLPLFSHIICIFWPVKESFMILRQ-QK 85
Query: 200 DDDTKWLTYWVVYACFSI 253
+ L YW++YA S+
Sbjct: 86 NPSDNILLYWILYAMVSL 103
>AF077541-5|AAC64629.1| 380|Caenorhabditis elegans Hypothetical
protein Y23H5A.4 protein.
Length = 380
Score = 31.1 bits (67), Expect = 0.47
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +2
Query: 38 EQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDD--T 211
E VG + I L LYL+ G A+ IC ++ V PA S + L + D
Sbjct: 52 EGLVGTKELVILSALTMC--LYLINGEYAQTICTALTSVPPALFSYRVLTNQMTDKQGYH 109
Query: 212 KWLTYWVVYACFSIGSTF 265
L YW +Y ++ F
Sbjct: 110 SILFYWTLYGLTALIDQF 127
>Z83128-7|CAB05634.2| 243|Caenorhabditis elegans Hypothetical
protein W01D2.3 protein.
Length = 243
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Frame = +2
Query: 26 FELAEQKVGVNRVYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDD 205
F E+ G R + F G + ++ I + + P +M++ A+ S +
Sbjct: 88 FREIERVFGRRREHCFYGALGVLLTLVLLNDAVGAITAFMTLIIPTFMTVTAISSTSSYE 147
Query: 206 DTKWLT--------YWVVYACFSIGSTF 265
+ +L YW VYA F G +F
Sbjct: 148 NPSFLKNHQDFFVRYWTVYAVFVTGESF 175
>Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical
protein T23D5.9 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 110 FGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFS-IGSTFPISSSAG 286
FGF + LICNS+ F+Y +K + K + + +V++ + I F S +AG
Sbjct: 14 FGFVSSLICNSV-FLYLTAFRIKKITGTYKLMVLVFASVGIVFSAWDLIARPFAHSFNAG 72
Query: 287 F 289
F
Sbjct: 73 F 73
>AF078157-18|AAG24080.1| 338|Caenorhabditis elegans Seven tm
receptor protein 28 protein.
Length = 338
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 253 REYFSDFIVGWFPLYWLLKCIFV--IWCY 333
R +S GW +YWLL C+ + +W Y
Sbjct: 119 RPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147
>AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical
protein T10B5.3 protein.
Length = 295
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 459 QAGHDQPSYCVGHIIDTTMVLLVVRTNDTVVDHQGPVVFSRQVAPDHED 313
+ GH + + I T L+ RTN+ V+ Q VVF+ + D ED
Sbjct: 180 RVGHHRDLLALHGKISTIADLIKRRTNNVVIVQQPLVVFNNDLDSDSED 228
>Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical
protein W02D9.2 protein.
Length = 232
Score = 27.9 bits (59), Expect = 4.4
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 116 FGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIGSTFPISSS 280
F L+ SIGFV+ Y SM L Q D + L + V+ + + S IS S
Sbjct: 179 FPLRLLITSIGFVWSTYASMGFLAGCQ-PDKKRLLVIYPVFLFYFVVSWMIISHS 232
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 189 DSRAFIDMYAGYTKPIELHINSAPKPNTKYKPVNATKPK 73
DS DMYA LH + P P+ KY P N++ P+
Sbjct: 581 DSNPVYDMYADSVVAAILHAQANPVPD-KYLPSNSSFPQ 618
>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 280 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 408
GWFP+++ L CI + C L SL + + I+ KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256
>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 280 GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 408
GWFP+++ L CI + C L SL + + I+ KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 147 PIELHINSAPK-PNTKYKPVNATKPKKMYTLF-TPTFCSASS 28
P + +N+ P PNTK P N T ++ LF P+ CS S
Sbjct: 516 PAMMAVNTPPATPNTKEAPTNCTSLLQVPRLFDCPSPCSVPS 557
>AC024748-4|AAF60410.1| 251|Caenorhabditis elegans Hypothetical
protein Y110A2AR.1 protein.
Length = 251
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 259 YFSDFIVGWF-PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMA 426
+ S F V F P Y F + +P + V+Y + + P+ +K+ RID+++
Sbjct: 52 FLSTFYVSCFIPFYDFFILTFTVLMAIP-HIGFASVLYTKFLAPFLRKYERRIDNIS 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,938,647
Number of Sequences: 27780
Number of extensions: 294873
Number of successful extensions: 964
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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