Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00285
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0RUA8 Cluster: Putative NAD-specific glutamate dehydro...    34   1.9  
UniRef50_Q0AQ50 Cluster: Peptidase M48, Ste24p precursor; n=2; H...    33   3.4  
UniRef50_Q2RPU2 Cluster: Putative suppressor for copper-sensitiv...    33   4.5  
UniRef50_Q2J7A9 Cluster: Regulator of polyketide synthase expres...    33   4.5  
UniRef50_A2QYV7 Cluster: Contig An12c0070, complete genome; n=1;...    33   4.5  
UniRef50_Q6C240 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    33   5.9  
UniRef50_Q2UA29 Cluster: Predicted protein; n=7; Trichocomaceae|...    33   5.9  
UniRef50_Q0UMH4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.8  

>UniRef50_Q0RUA8 Cluster: Putative NAD-specific glutamate
            dehydrogenase; n=1; Frankia alni ACN14a|Rep: Putative
            NAD-specific glutamate dehydrogenase - Frankia alni
            (strain ACN14a)
          Length = 1109

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = +2

Query: 128  SITQNLRRAAEKLYEDPIEEVERRLLIASGLPNRTGDQIRALKMDMSA 271
            ++ + LRR   +   D IE V RRLL  +GLP R  +Q+  LK+ ++A
Sbjct: 937  ALPETLRRLGAREELDAIETVRRRLL-GAGLPLRAAEQVARLKVMVNA 983


>UniRef50_Q0AQ50 Cluster: Peptidase M48, Ste24p precursor; n=2;
           Hyphomonadaceae|Rep: Peptidase M48, Ste24p precursor -
           Maricaulis maris (strain MCS10)
          Length = 453

 Score = 33.5 bits (73), Expect = 3.4
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = +2

Query: 113 YFHNASITQNLRRAAEKLYEDP----IEEVERRLLIASGLPNRT-GDQIRALKMDMSAPI 277
           Y+H+A + + L   A  L E+P      E+  ++L  SG P +      R+++++ +AP+
Sbjct: 278 YYHDARLERALEEIASLLAEEPENPYFHELHAQMLFESGRPGQAIAPNRRSVELEPTAPL 337

Query: 278 GRIN 289
            RIN
Sbjct: 338 LRIN 341


>UniRef50_Q2RPU2 Cluster: Putative suppressor for copper-sensitivity
           B precursor; n=1; Rhodospirillum rubrum ATCC 11170|Rep:
           Putative suppressor for copper-sensitivity B precursor -
           Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
          Length = 715

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 26/97 (26%), Positives = 42/97 (43%)
 Frame = -1

Query: 291 LFIRPIGALISIFRARI*SPVLFGRPLAINNLLSTSSMGSSYNFSAARRRFCVMLAL*K* 112
           LF+  +  L+++F A +      G P A++ L      GSS + + A   F  +LA    
Sbjct: 395 LFLSGMVVLLALFAANLWGLFEIGLPGAVSGLGGQGRAGSSLSGAFATGAFATVLA---- 450

Query: 111 KPHPAPINKLPIAIALPNFPAGVPDIFLGFHFDVSIP 1
            P  AP     +  AL   P  +  IFL     +++P
Sbjct: 451 TPCSAPFLGTAVGFALARGPFEILAIFLALGLGMALP 487


>UniRef50_Q2J7A9 Cluster: Regulator of polyketide synthase
           expression-like; n=5; Bacteria|Rep: Regulator of
           polyketide synthase expression-like - Frankia sp.
           (strain CcI3)
          Length = 539

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +2

Query: 20  WKPRKISGTPAGKF-GSAIAIGSLLIGAGCGFYFHNASITQNLRRAAEKLYEDPIEEVER 196
           + P + +GTP  +  G+ +  GS L       Y H  ++   LR+AAE    DP +  ER
Sbjct: 459 YAPLRDAGTPLLETTGAYLDFGSSLEATARALYLHTNTVRYRLRKAAEVCGLDPADHRER 518

Query: 197 RLL 205
            +L
Sbjct: 519 FIL 521


>UniRef50_A2QYV7 Cluster: Contig An12c0070, complete genome; n=1;
           Aspergillus niger|Rep: Contig An12c0070, complete genome
           - Aspergillus niger
          Length = 2831

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = -1

Query: 351 LIETCFFISTLPIITTITHSLFIRPIGALISIFRARI*SPVLFGRPLAINNLLSTSSMGS 172
           L E CF  S  P+++T+T+     P     S +R  + SPVLF    A++ +LS      
Sbjct: 706 LSEICFNESMTPLVSTVTNETISDPCVLNPSYWRRNVESPVLFN--TAVDKILSEGDQAL 763

Query: 171 SY 166
           ++
Sbjct: 764 AF 765


>UniRef50_Q6C240 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 305

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 17  KWKPRKISGTPAGKFGS--AIAIGSLLIGAGCGFYFHNASITQ 139
           K+KP+K  GTP  K  +   + +G +LI AG   YF +  + Q
Sbjct: 61  KYKPQKYLGTPGKKIATYGTLILGGMLISAGSHVYFASNLVKQ 103


>UniRef50_Q2UA29 Cluster: Predicted protein; n=7;
           Trichocomaceae|Rep: Predicted protein - Aspergillus
           oryzae
          Length = 296

 Score = 32.7 bits (71), Expect = 5.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 167 YEDPIEEVERRLLIASGLPNRTGDQIRALKMD 262
           Y D ++E+ER+L+I    P R GD ++ L  D
Sbjct: 149 YADRVDELERKLMIGDTTPARQGDAVKDLDTD 180


>UniRef50_Q0UMH4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 604

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 122 NASITQNLRRAAEKLYEDPIEEVERRLLIASGLPN 226
           N S+ Q ++  + +L+ D +EEV R+ L+ SG PN
Sbjct: 467 NISLVQLIKALSLRLWPDEMEEVMRKELVKSGTPN 501


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,986,831
Number of Sequences: 1657284
Number of extensions: 8672132
Number of successful extensions: 19915
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19911
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)