Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00284
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        31   0.025
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.2  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    23   8.8  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    23   8.8  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 31.1 bits (67), Expect = 0.025
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 86  LLIG--AGCGFYFHNASITQNLRRAAEKLYEDPIEEVERRLLIASGLPNRTGDQIRALKM 259
           +LIG  +  GFY  N  + Q +R  + +L+E   +E+E  +L   GLP+R   Q     +
Sbjct: 16  VLIGLVSSTGFYIDNG-VDQTVREKSVELHER--QEIEHEILELLGLPDRPNKQHVHPSL 72

Query: 260 DMSAP 274
             SAP
Sbjct: 73  RKSAP 77


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 31  KNIRNSCRKIW*CNCYR*LINR 96
           ++++  CRK W   C+R L+NR
Sbjct: 780 ESLKFECRKQWLRRCHRPLVNR 801


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -3

Query: 294 SLFIRPIGALISIFRARI*SPVLF-GRPLA 208
           ++F+  +GAL+++FR  I +  L+ G PLA
Sbjct: 585 TIFLMMVGALVAVFRIDIWTSFLWNGVPLA 614


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 369 CKYSYHLIETCF 334
           CK +YHL+  CF
Sbjct: 250 CKRAYHLLYKCF 261


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 38  SGTPAGKFGSAIAIGSLLIGAGCGFYFHNASITQNLRRAAEKLYEDPIEEVERRL 202
           +GT A  + S +   S+       FYFH          A  K+YE P E+V+  L
Sbjct: 253 TGTHAYDYYSCLLNSSVKEDFRNAFYFHELRSANYGYLAMGKVYEGP-EKVKEEL 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,559
Number of Sequences: 2352
Number of extensions: 9742
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)