Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00283
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 64 1e-10
SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2) 58 9e-09
SB_7524| Best HMM Match : V-ATPase_G (HMM E-Value=3.2) 58 9e-09
SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9) 56 2e-08
SB_1285| Best HMM Match : SET (HMM E-Value=0.011) 52 4e-07
SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_11041| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_47909| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 44 9e-05
SB_15971| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1) 42 4e-04
SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23) 40 0.002
SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_58697| Best HMM Match : Chromo (HMM E-Value=5.5e-09) 36 0.033
SB_52495| Best HMM Match : AT_hook (HMM E-Value=4.6) 36 0.033
SB_31608| Best HMM Match : DUF298 (HMM E-Value=3.9) 36 0.033
SB_51752| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_26234| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_53293| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_56711| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_51842| Best HMM Match : YTH (HMM E-Value=1.8) 32 0.40
SB_22749| Best HMM Match : CITED (HMM E-Value=8.7) 32 0.53
SB_50568| Best HMM Match : EGF (HMM E-Value=0) 32 0.53
SB_14761| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_30652| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_435| Best HMM Match : zf-CCHC (HMM E-Value=2) 31 0.71
SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_36747| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_9525| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_2153| Best HMM Match : Laminin_G_2 (HMM E-Value=0.36) 29 5.0
SB_5599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_19691| Best HMM Match : NDUF_B7 (HMM E-Value=6.1) 28 6.6
SB_56078| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = -2
Query: 273 NATEQI*KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDE 97
N EQ+ KI LHFN+ E KP GH EHD+LF +R +I++ +E F N+ ++DE
Sbjct: 559 NVKEQVRKINQYLHFNDAEKAKPRGHEEHDKLFHVRPLIKRLSETFLEAYKPNRENAIDE 618
Query: 96 QMCSTKIGHFLNQYLLNKPHRWGFKLYVLCD 4
+ K QY+ KP + G K+++ D
Sbjct: 619 GLIKYKGRLGFKQYMPLKPAKRGIKVWLRAD 649
>SB_24312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -2
Query: 207 PIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKIGHFLNQYLLNKPHRW 31
PI +HD+L K+R + F ER A Q +++DE+M +K + QY+ NKP +W
Sbjct: 268 PIEEVDHDKLRKVRSFLDHFKERCKALYQPFQNVAIDEKMVKSKHRSGMRQYIKNKPTKW 327
Query: 30 GFKLYVLCD 4
G KL+VL D
Sbjct: 328 GLKLWVLAD 336
>SB_19874| Best HMM Match : CBM_X (HMM E-Value=2.2)
Length = 725
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
KI LH+NN+ KP GHPEHD+L IR +I + E F N+ ++DE + K
Sbjct: 184 KITQYLHYNNSATAKPRGHPEHDKLHLIRPLITKLGESFLVQYKPNRENAIDEGLVKFKG 243
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP + G K+++ D
Sbjct: 244 RLAYKQYMPMKPVKRGIKVWIRAD 267
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 422 IPSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPR--FGYDPISSTMPQNKFRK 249
I S+P T T+ +L + GI + PS+R YWS I MP++++ K
Sbjct: 126 IASDPKWYAT-TKDELCAYFGIRFLQGIISVPSERHYWSKNEFLSVKKIKDVMPRDRYLK 184
Query: 248 *SYY 237
+ Y
Sbjct: 185 ITQY 188
>SB_7524| Best HMM Match : V-ATPase_G (HMM E-Value=3.2)
Length = 492
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
KI LH+NN+ KP GHPEHD+L IR +I + E F N+ ++DE + K
Sbjct: 372 KITQYLHYNNSATAKPRGHPEHDKLHLIRPLITKLGESFLVQYKPNRENAIDEGLVKFKG 431
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP + G K+++ D
Sbjct: 432 RLAYKQYMPMKPVKRGIKVWIRAD 455
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 422 IPSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPR--FGYDPISSTMPQNKFRK 249
I S+P T T+ +L + GI ++ PS+R YWS I MP++++ K
Sbjct: 314 IVSDPKWYAT-TKDELCAYFGIRFLQGIKSVPSERHYWSKNEFLSVKKIKDVMPRDRYLK 372
Query: 248 *SYY 237
+ Y
Sbjct: 373 ITQY 376
>SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9)
Length = 485
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
KI LHFN+ E KP GH EHD+LF +R +I++ +E F N+ ++DE + K
Sbjct: 366 KINQYLHFNDAEKAKPRGHEEHDKLFHVRPLIKRLSETFLEAYKPNRENAIDEGLIKYKG 425
Query: 75 GHFLNQYLLNKPHRWGFKLYV 13
QY+ KP + G K+++
Sbjct: 426 RLGFKQYMPLKPAKRGIKVWL 446
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = -3
Query: 458 INSLVEQTNLYIIPSNPGSSTTYTE----YDLYQFLGILLYMSVQKYPSKRSYW--SPRF 297
I+ +VE+TN + + TY E D+ +L I L ++ PS+R YW SP
Sbjct: 293 IDLIVEETNRNARQKD--ADPTYWEPVNASDIKIYLAIRLLQGIKSVPSERDYWATSPFL 350
Query: 296 GYDPISSTMPQNKFRK*SYY 237
G I M +NK+ K + Y
Sbjct: 351 GVKSIKDAMSKNKYVKINQY 370
>SB_1285| Best HMM Match : SET (HMM E-Value=0.011)
Length = 829
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 IGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKIGHFLNQYLLNKPHRWG 28
I + D+L K+R + F ER A Q +++DE+M +K + QY+ NKP +WG
Sbjct: 269 IEEDDQDKLRKVRSFLDHFKERCKALYQPFQNVAIDERMVKSKHRSGMRQYIKNKPTKWG 328
Query: 27 FKLYVLCD 4
KL+VL D
Sbjct: 329 LKLWVLAD 336
>SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = -2
Query: 252 KIKLLLHFN--NNELHKPIGHPEHDRLFKIRIVIQQF--NERFATVPMNQRLSVDEQMCS 85
+I LHF+ NNEL G ++DRLFK+R V+ N + A P + SVDE+M +
Sbjct: 63 EIAQFLHFSDPNNELQH--GDADYDRLFKVRTVLSDVLKNIQQAYEPSKDK-SVDERMIA 119
Query: 84 TKIGHFLNQYLLNKPHRWGFKLYVLCD 4
K QY+ KP ++G K+++ D
Sbjct: 120 FKGRLCFRQYMPAKPMKYGIKVWMAAD 146
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWSPR--FGYDPISSTMPQNKFRK 249
T +L+ FLG+ L M + P + YWS FG I +P+ +F +
Sbjct: 15 TPDELHMFLGVALVMGINSLPQQALYWSQNALFGNLGIQDVIPKTRFEE 63
>SB_11041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERFATVPM-NQRLSVDEQMCSTKI 76
K+ LH N+ P +P+HD+L K+R V+ + E+ + + + +++DE M K
Sbjct: 94 KLSQYLHLNDKSTALPRENPQHDKLHKVRPVVDRVLEQCRSEYLPTKNVALDEAMIKYKG 153
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
+ QY+ NKP + G K++ D
Sbjct: 154 RLGMKQYMPNKPIKRGIKVWECTD 177
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 425 IIPSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNKFR 252
I+ N S T ++ FLG+ + ++K PS + YWS P G + M + +F
Sbjct: 34 ILSDNIQSGEVTTAEEMKAFLGLHIVFGIKKLPSVQLYWSKNPLLGVPEVQKRMQKGRFE 93
Query: 251 K*SYY 237
K S Y
Sbjct: 94 KLSQY 98
>SB_47909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQF--NERFATVPMNQRLSVDEQMCSTK 79
+I LLHF++ G ++DRLFK+R V+ N + A P + SVDE M + K
Sbjct: 87 EIAQLLHFSDPNNEPQHGDADYDRLFKVRPVLSDVLKNIQQAYGPSKDK-SVDEGMIAFK 145
Query: 78 IGHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 146 GRLCFRQYMPAKPMKYGIKVWMAAD 170
>SB_29524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
+I LHF++ G ++DRLFK+R+V+ + ++ +SVDE M + K
Sbjct: 35 EIAQFLHFSDPNNEPQRGDADYDRLFKVRLVLSDVLKSIQQAYEPSKDISVDEGMIAFKG 94
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 95 RLGFRQYMPAKPTKYGIKVWMAAD 118
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
+I LHF+++ G ++DRLFK+R V+ + T ++ +SVDE + + K
Sbjct: 87 EIAQFLHFSDSNNEPQRGDADYDRLFKVRPVLSDVLKSIQQTYEPSKDISVDEGLIAFKG 146
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 147 RLGFRQYMPAKPTKYGIKVWMAAD 170
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNKFRK 249
T +L FLG+ L M + P + YWS P FG I +P+ +F +
Sbjct: 39 TPDELRMFLGVALVMGINSLPQQALYWSQNPLFGNLGIQDVIPKTRFEE 87
>SB_15971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF--ATVPMNQRLSVDEQMCSTK 79
+I LHF+N G ++DRLFK+R V+ + A P + SVDE M + K
Sbjct: 35 EIAQFLHFSNPNNKPQRGDADYDRLFKVRPVLSDVLKSIQQAYEPSKDK-SVDEGMIAFK 93
Query: 78 IGHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 94 GRLGFRQYMPAKPTKYGIKVWMAAD 118
>SB_53723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERFATV-PMNQRLSVDEQMCSTKI 76
+I LHF++ G ++DRLFK+R V+ + ++ +SVDE M + K
Sbjct: 184 EIAQFLHFSDPNNEPQRGDADYDRLFKVRPVLSDVLKSIQQAYKPSKDISVDEGMIAFKG 243
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 244 RLCFRQYMPAKPTKYGIKVWMAAD 267
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNKFRK 249
T +L FLG+ L M + P + YWS P FG I +P+ +F +
Sbjct: 136 TPDELRMFLGVALVMGINSLPQQALYWSQNPLFGNLGIQDVIPKTRFEE 184
>SB_25778| Best HMM Match : COX17 (HMM E-Value=1.1)
Length = 567
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERFATV-PMNQRLSVDEQMCSTKI 76
+I LHF++ G ++DRLFK+R V+ + ++ +SVDE M + K
Sbjct: 184 EIAQFLHFSDPNNEPQRGDADYDRLFKVRPVLSDVLKSIQQAYEPSKDISVDEGMIAFKG 243
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 244 RLGFRQYMPAKPTKYGIKVWMAAD 267
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNKFRK 249
T +L FLG+ L M + P + YWS P FG I +P+ +F +
Sbjct: 136 TPDELRMFLGVALVMGINSLPQQALYWSQNPLFGNLGIQDVIPKTRFEE 184
>SB_20906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNE--RFATVPMNQRLSVDEQMCSTK 79
K+ LH N+ +P+HD+L K+R V+ + E R +PM + +++DE M K
Sbjct: 8 KLSQYLHLNDKSTVLLRENPQHDKLHKVRPVVDRVLEQCRSEYLPM-KNVAIDEAMIKYK 66
Query: 78 IGHFLNQYLLNKPHRWGFK 22
+ QY+ NKP + G K
Sbjct: 67 GRLGIKQYMPNKPIKRGIK 85
>SB_50051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -2
Query: 249 IKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERFATV-PMNQRLSVDEQMCSTKIG 73
I LHF++ G ++DRLFK+R V+ + ++ +SVDE M + K
Sbjct: 185 IAQFLHFSDLNNEPQRGDADYDRLFKVRPVLSDVLKSIQQAYEPSKDISVDEGMIAFKGR 244
Query: 72 HFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 245 LGFRQYMPAKPTKYGIKVWMAAD 267
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNKFRK*SYYYILTTMN 216
T +L FLG+ L + + P + YWS P FG I +P+ +F + + + +N
Sbjct: 136 TPDELRMFLGVALVIGINSLPQQALYWSQNPLFGNLGIQDVIPKTRFEAIAQFLHFSDLN 195
>SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23)
Length = 299
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQF--NERFATVPMNQRLSVDEQMCSTK 79
+I LHF+N ++D LFK+R V+ N + A P + SVDE M + K
Sbjct: 176 EIAQFLHFSNPNNELQHRDADYDSLFKVRTVLSDVLKNIQQAYEPSKDK-SVDEGMIAFK 234
Query: 78 IGHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 235 GRLCFRQYMPAKPMKYGIKVWMAAD 259
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWSPR--FGYDPISSTMPQNKFRK 249
T +L+ FLG+ L M + P + YWS FG I +P+ +F +
Sbjct: 128 TPDELHMFLGVALVMGINSLPQQALYWSQNALFGNLGIQDVIPKTRFEE 176
>SB_21408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
+I LHF++ G ++DRLFK+R V+ + ++ +SVDE + K
Sbjct: 147 EIAQFLHFSDPNNEPQRGDADYDRLFKVRPVLSDVLKSIQQAYEPSKDISVDEGTIAFKG 206
Query: 75 GHFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 207 RLGFRQYMPAKPTKYGIKVWMAAD 230
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNKFRK 249
T +L FLG+ L M + P + YWS P FG I +P+ +F +
Sbjct: 99 TPDELRMFLGVALVMGINSLPQQALYWSQNPLFGNLGIQDVIPKTRFEE 147
>SB_58697| Best HMM Match : Chromo (HMM E-Value=5.5e-09)
Length = 590
Score = 35.9 bits (79), Expect = 0.033
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTKI 76
+I LHF++ G ++DRLFK+R V+ + T ++ +SVDE M + K
Sbjct: 60 EIAQFLHFSDPNNEPQRGDADYDRLFKVRPVLSNVLKSIQQTYEPSKDISVDEGMIAFKG 119
Query: 75 GHFLNQYLLNKPHRW 31
QY+ KP ++
Sbjct: 120 RLGFRQYMPVKPTKY 134
>SB_52495| Best HMM Match : AT_hook (HMM E-Value=4.6)
Length = 183
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 407 GSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYW--SPRFGYDPISSTMPQNKF 255
G++ + +L FLGI++ M + K PS R YW P I+ +P+++F
Sbjct: 33 GTAKELSAEELRAFLGIVIMMGIVKLPSVRDYWCEDPYLHQGEIAKRIPRDRF 85
>SB_31608| Best HMM Match : DUF298 (HMM E-Value=3.9)
Length = 203
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 407 GSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYW--SPRFGYDPISSTMPQNKF 255
G++ + +L FLGI++ M + K PS R YW P I+ +P+++F
Sbjct: 53 GTAKELSAEELRAFLGIVIMMGIVKLPSVRDYWCEDPYLHQGEIAKRIPRDRF 105
>SB_51752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 407 GSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYW--SPRFGYDPISSTMPQNKF 255
G++ + +L FLGI++ M + K PS R YW P I+ +P+++F
Sbjct: 33 GTAKELSAEELRAFLGIVIMMGIVKLPSVRDYWCEDPYLHQGEIAKRIPRDRF 85
>SB_26234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -3
Query: 407 GSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPR--FGYDP-ISSTMPQNKF 255
G+ T +L FLGI + M + K PSK+ YWS F Y P I+ + +++F
Sbjct: 120 GNIKPLTVEELKTFLGITIMMGIVKLPSKKDYWSESEPFLYQPNIARPIVRDRF 173
>SB_37213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = -2
Query: 252 KIKLLLHFNNNELHKPIGHPEHDRLFKIRIVIQQFNERFATVPMNQRLSVDEQMCSTKIG 73
+I LHF++ G ++DRLFK+R A + + +SV+E M + K
Sbjct: 48 EIAQFLHFSDPNNEPQRGDADYDRLFKVR-------PYPANLRALKDMSVNEGMIAFKGR 100
Query: 72 HFLNQYLLNKPHRWGFKLYVLCD 4
QY+ KP ++G K+++ D
Sbjct: 101 LGFRQYMPAKPTKYGIKVWMAAD 123
>SB_53293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 216 LHKPIGHPEHDRLFKIRIVIQQFNERFATVPM-NQRLSVDEQMCSTKIGHFLNQYLLNKP 40
+ K I P HD+L K+R + + F+ + +Q +S+DE M K QY+ P
Sbjct: 297 IQKSILSPGHDKLHKVRPFLDALEKSFSEHYLPSQNVSIDEAMVKYKGRLGFKQYM---P 353
Query: 39 HRWGFKLYVLCD 4
+ G K++V D
Sbjct: 354 IKRGIKIWVHAD 365
>SB_11956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 832
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 407 GSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYW--SPRFGYDPISSTMPQNKF 255
G++ + + FLGI++ M + K PS R YW P ++ +P+++F
Sbjct: 398 GTAKELSAKEFRAFLGIVIMMGIVKLPSVRDYWCGDPYLHQGEMAKRIPRDRF 450
>SB_52794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1408
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 419 PSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGYDPISST 273
P+ P ++ T+YD+ Q + Y S+ +PS + + YD + ST
Sbjct: 1263 PARPPNNGNVTQYDVTQVSSVTQYESMNSHPSLHQHVAANRQYDGVDST 1311
>SB_56711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 207 PIGHPEHDRLFKIRIVIQQFNERF-ATVPMNQRLSVDEQMCSTK 79
PI +HD+L K+R + F ER A Q +++DE+M +K
Sbjct: 18 PIEEDDHDKLRKVRSFLDHFKERCKALYQPFQNVAIDERMVKSK 61
>SB_51842| Best HMM Match : YTH (HMM E-Value=1.8)
Length = 244
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 407 GSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWS 306
G+ T +L FLGI + M + K PS + YWS
Sbjct: 126 GNIKPLTVEELKAFLGITIMMGIVKLPSMKDYWS 159
>SB_22749| Best HMM Match : CITED (HMM E-Value=8.7)
Length = 227
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 419 PSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGYDPISST 273
P+ P ++ T+YD+ Q + Y S+ +PS + + YD + ST
Sbjct: 74 PARPPNNGNVTQYDVTQGSNVTQYESMNSHPSLHQHVAANRQYDGVDST 122
>SB_50568| Best HMM Match : EGF (HMM E-Value=0)
Length = 792
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 419 PSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGYDPISST 273
P+ P ++ T+YD+ Q + Y S+ +PS + + YD + ST
Sbjct: 554 PARPPNNGNVTQYDVTQGSNVTQYESMNSHPSLHQHVAANRQYDGVDST 602
>SB_14761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 31.9 bits (69), Expect = 0.53
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 374 YQFLGILLYMSVQKYPSKRSYWSPRFG 294
Y+ +G YM+VQ+Y + YW P +G
Sbjct: 57 YRSMGFQEYMAVQEYMGVQEYWCPEYG 83
>SB_30652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -3
Query: 419 PSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGYDPISST 273
P+ P ++ T+YD+ Q + Y ++ +PS + + YD + ST
Sbjct: 54 PARPPNNGNVTQYDVTQVSSVTQYEAMNSHPSLHQHVAANRQYDGVDST 102
>SB_435| Best HMM Match : zf-CCHC (HMM E-Value=2)
Length = 913
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2
Query: 159 IQQFNERFATVPMNQRLSVDEQMCSTKIGHFLNQYLLNKPHRWGFKLYVLCD 4
+ F FAT LS+DE M K QY+ KP + G K++ LCD
Sbjct: 548 LDNFEAYFAT---KGELSIDEAMIKYKGRLSFVQYMPMKPTKRGIKVFCLCD 596
>SB_42189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFGYDPISSTMPQNK 258
T +L FLG+ L M + P + YWS P FG I Q K
Sbjct: 174 TPDELRMFLGVALVMGINSLPQQALYWSQNPLFGNLGIQDVTRQGK 219
>SB_36747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 189 HDRLFKIRIVIQQFNERFAT-VPMNQRLSVDEQMCSTKIGHFLNQYLLNKPHRWGFKLYV 13
HD+L IR +I + E F N+ ++DE + K QY+ KP + G K+++
Sbjct: 67 HDKLHLIRPLITKLGESFLVQYKPNRENAIDEGLVKFKGRLAYKQYMPMKPVKRGIKVWI 126
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = -3
Query: 422 IPSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGY---DPISSTMPQNKFR 252
I S+P T T+ L + GI ++ PSKR YW PR + I MP++++
Sbjct: 3 IVSDPKWYAT-TKDKLCVYFGIRFLQGIKSVPSKRHYW-PRNEFILVKKIKDVMPRDRYL 60
Query: 251 K*SYY 237
K Y
Sbjct: 61 KIRQY 65
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 389 TEYDLYQFLGILLYMSVQKYPSKRSYWS--PRFG 294
T +L FLG+ L M + P + YWS P FG
Sbjct: 1918 TPDELRMFLGVALVMGINSLPQQALYWSQNPLFG 1951
>SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1924
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 129 VPMNQRLSVDEQMCSTKIGHFLNQYLLNKPHRWGFKLYVLCD 4
V M RLS+DE M K Y+ KP + G K++ LC+
Sbjct: 1569 VMMGIRLSIDEAMIKYKGRLSFVYYMPMKPVKRGIKVFCLCE 1610
>SB_9525| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 425 IIPSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGY 291
+I S+P + + +Y + QFL L+ S Q K SYW R Y
Sbjct: 32 LIQSDPVTCARHFDYQVNQFLTNFLFSSAQPL-GKISYWFYRVEY 75
>SB_2153| Best HMM Match : Laminin_G_2 (HMM E-Value=0.36)
Length = 369
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = -3
Query: 419 PSNPGSSTTYTEYDLYQFLGILLYMSVQKYPSKRSYWSPRFGYDPISST 273
P+ P ++ T+YD+ + Y ++ +PS + + YD + ST
Sbjct: 43 PARPPNNGNVTQYDVTHGSSVTQYEAMNSHPSLHQHVAANRQYDGVDST 91
>SB_5599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 207 PIGHPEHDRLFKIRIVIQQFNER-FATVPMNQRLSVDEQM 91
PI +HD+L K+R + F ER A Q +++D++M
Sbjct: 115 PIEEDDHDKLRKVRSFLDHFKERGKALYQPFQNVAIDKRM 154
>SB_19691| Best HMM Match : NDUF_B7 (HMM E-Value=6.1)
Length = 154
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -3
Query: 446 VEQTNLYIIPSNPGSSTTYTEYDLYQFLGILL-YMSVQKY-PSKRSYWSPRFGYD 288
V Q +LY + + ++ Q L ++L ++ KY P RS++SP GYD
Sbjct: 24 VSQVSLYALEKALEGTCNQIPFETIQALDVVLRHLPSMKYTPVGRSFFSPPDGYD 78
>SB_56078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 162 VIQQFNERFATVPMNQRLSVDEQMCSTKIGHFLNQYLLNKPHRWGFKLYVLCD 4
V++Q + T + ++VDE M K + QY+ NKP + G K++ D
Sbjct: 54 VLEQCRSEYLTT---KNVAVDEAMIKYKGRLGIRQYMPNKPIKRGIKVWECAD 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,160,443
Number of Sequences: 59808
Number of extensions: 324300
Number of successful extensions: 758
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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