Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00282
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 114 7e-26
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 107 6e-24
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 99 4e-21
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 51 7e-07
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 48 7e-06
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 46 3e-05
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 44 1e-04
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 42 3e-04
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 36 0.028
12_01_1023 + 10458092-10458397,10459126-10459254,10459335-104595... 31 0.80
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 31 1.1
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 29 2.4
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 29 2.4
08_02_0459 + 17420156-17420976,17422291-17424199 29 4.3
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 28 5.6
04_04_1638 + 34974369-34974764 28 5.6
10_08_0585 - 18998013-18998306,18998448-18998630,18999048-189990... 28 7.5
06_03_0885 + 25677243-25678157,25681064-25681705 28 7.5
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 28 7.5
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 28 7.5
01_05_0133 + 18452032-18452061,18452703-18452849,18452925-184532... 28 7.5
11_04_0153 + 14159820-14162417 27 9.9
09_04_0189 + 15438538-15438591,15438671-15438891,15438982-154392... 27 9.9
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 114 bits (274), Expect = 7e-26
Identities = 51/87 (58%), Positives = 67/87 (77%)
Frame = +2
Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKL 436
D +GKRYLD FGGIVTVS GHCHP + A+ +Q +L HTT +Y + I E+ E LA+K+
Sbjct: 101 DENGKRYLDCFGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTIYLNQPIVEFAEALASKM 160
Query: 437 PGDLNVVYLVNSGSEANELATLLAKVH 517
PG+L VVY VNSG+EANELA L+A+++
Sbjct: 161 PGNLKVVYFVNSGTEANELAMLMARLY 187
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/50 (40%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +3
Query: 507 RRYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPG-FYHAVHPD 653
R Y+GNL++I+L+ +YHG ++ +GLT Q+++ P+P G +H ++PD
Sbjct: 185 RLYSGNLNMIALRNAYHGGSAGTIGLTGLQTWK--YPIPQGEIHHVMNPD 232
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 108 MPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWL 254
MPP + PRPY G S ++ + ++ S+ Y+KP+ + +G MQ+L
Sbjct: 51 MPPFEHRPRPYAGWSGDEILAKRKQFLGSSVFYYYQKPLNIVEGKMQYL 99
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 107 bits (258), Expect = 6e-24
Identities = 52/109 (47%), Positives = 71/109 (65%)
Frame = +2
Query: 191 AFNHERL*EAGASHPGAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLW 370
A+ H R S+ H + D DG+RYLD FGGI TV GHCHP V A+ +Q +
Sbjct: 84 AYRHPRF----GSYRDYHKYLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRIQ 139
Query: 371 HTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKVH 517
H+T LY + I ++ E LAAK+PGDL VV+ NSG+EANELA ++A+++
Sbjct: 140 HSTVLYLNHAIADFAEALAAKMPGDLKVVFFTNSGTEANELALMIARLY 188
Score = 42.3 bits (95), Expect = 3e-04
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 105 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 221
KMPP D+ P PY GP +++ + + ++ PS+ + Y +P
Sbjct: 44 KMPPFDYTPPPYDGPRAEEISRKRAEFLSPSLFHFYDRP 82
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 507 RRYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYHAVHPD 653
R YTG DIISL+ YHG + MG TA +++ G +HA++PD
Sbjct: 186 RLYTGCHDIISLRNGYHGNAAGTMGATAQCNWKF----NTGVHHALNPD 230
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 98.7 bits (235), Expect = 4e-21
Identities = 45/87 (51%), Positives = 60/87 (68%)
Frame = +2
Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKL 436
D G+RYLD F GI TV GHCHP V A+ Q L H+T LY + I ++ E LA+K+
Sbjct: 77 DERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRLQHSTVLYLNHAIADFAEALASKM 136
Query: 437 PGDLNVVYLVNSGSEANELATLLAKVH 517
PGDL VV+ NSG+EANELA ++A+++
Sbjct: 137 PGDLKVVFFTNSGTEANELAIMMARLY 163
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 507 RRYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYHAVHPD 653
R YTG+ DIISL+ SYHG + MG TA ++++ ++ V G +HAV+PD
Sbjct: 161 RLYTGSHDIISLRNSYHGNAAGTMGATAQKNWKFSV-VQSGVHHAVNPD 208
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 48 MANRGTKLCFDIVRTYSTAKMPPTDF--VPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 221
+A RG V T + A DF VP PY GPS ++ + + ++ PS+ + Y KP
Sbjct: 5 IARRGLSRLAAAVETAAVAPPRMADFNHVPLPYDGPSAAEIARKRAEFLSPSLFHFYSKP 64
Query: 222 VLLTQGHMQWL 254
+ + +G MQ+L
Sbjct: 65 LNIVEGKMQYL 75
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/113 (29%), Positives = 56/113 (49%)
Frame = +2
Query: 173 ERSLHAAFNHERL*EAGASHPGAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKD 352
ERS H N+ + + G+H + D +G +Y+D V+ GHCHPKV ALK+
Sbjct: 48 ERSAH---NYHPIPVVFSKGEGSHIL--DPEGNKYIDFLSAYSAVNQGHCHPKVLRALKE 102
Query: 353 QLDVLWHTTNLYRHPKIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAK 511
Q + L ++ + + K + E L + ++ +N+G+E E A L +
Sbjct: 103 QAERLTLSSRAFYNDKFPIFAEYLTSMF--GYEMMLPMNTGAEGVETAIKLVR 153
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRHPKIYEYVEQLAAK 433
D DG+ YLD+ GI ++GH P AA+ Q L H +N+ Y P++ ++L
Sbjct: 95 DADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNVQYTVPQV-ALAKRLVEA 153
Query: 434 LPGDLNVVYLVNSGSEANELATLLAK 511
D V+ N+G+EANE A A+
Sbjct: 154 SFADR--VFFANTGTEANEAAIKFAR 177
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +2
Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRHPKI-YEYVEQLAA 430
D DG+ YLD+ GI ++GH P AA+ Q L H +N+ Y P+ E V A
Sbjct: 99 DADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNVQYTVPQASLERVTPTAH 158
Query: 431 KLPGDLNV---VYLVNSGSEANELATLLAKVHRK 523
+ + V+ N+G+EANE A A+ +++
Sbjct: 159 HRLVEASFADRVFFANTGTEANEAAIKFARKYQR 192
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 251 VNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLYRHPKIYEYVEQ 421
V D DGK+YLD G+ ++G P++ A +QL L +H+ N P + E
Sbjct: 522 VYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRTTKPSLDLAKEL 581
Query: 422 LAAKLPGDLNVVYLVNSGSEANE 490
L+ ++ V+ NSGSEAN+
Sbjct: 582 LSMFTAREMGKVFFTNSGSEAND 604
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 230 HPGAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLYRHPK 400
H + V D+ G +YLD G+ ++G P++ A DQL+ L +H+ N P
Sbjct: 53 HITGGSYVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPP 112
Query: 401 IYEYVEQLAAKLPGDLNVVYLVNSGSEANE 490
+ E ++ ++ V+ NSGSEAN+
Sbjct: 113 LDLAEELISMFTAKEMGKVFFTNSGSEAND 142
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +2
Query: 251 VNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVL--WHT-TNLYRHPKIYEYVEQ 421
V D +GK+Y+D G+ + ++G P++ A DQL+ L +H+ N P + E
Sbjct: 133 VYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKLPFYHSFWNRTTKPSLDLANEI 192
Query: 422 LAAKLPGDLNVVYLVNSGSEANE 490
L+ ++ ++ NSGSEAN+
Sbjct: 193 LSMFTAREMGKIFFTNSGSEAND 215
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 35.9 bits (79), Expect = 0.028
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYV--EQLAA 430
D DG Y+D G +GH VNAAL ++ L T+ + P + E V E + +
Sbjct: 99 DVDGNEYIDYVGSWGPAIIGHADDTVNAAL---IETLKKGTS-FGAPCVLENVLAEMVIS 154
Query: 431 KLPGDLNVVYLVNSGSEA 484
+P + +V VNSG+EA
Sbjct: 155 AVP-SIEMVRFVNSGTEA 171
>12_01_1023 +
10458092-10458397,10459126-10459254,10459335-10459553,
10459649-10459987,10460095-10460199,10460697-10460807,
10461438-10461688,10462023-10462146,10462440-10462716,
10463212-10463357,10463449-10463598,10463678-10463910,
10464246-10464375,10464406-10464510,10464636-10464914
Length = 967
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 416 EQLAAKLPGDLNVVYLVNSGSEANELATLLAKVHRKPRHHIAADQLPRLHQQ---PHGLD 586
E+ P + V+L + A E A +AKVH++P H + D P Q P G D
Sbjct: 187 EESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPSGGD 246
Query: 587 G 589
G
Sbjct: 247 G 247
>05_01_0168 +
1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 519 LCTFASKVASSLASDPLFTKYTTFKSPGSLAANCSTYS*IF 397
LC K+ SL DP F+ T K PG L + +Y+ +F
Sbjct: 779 LCRVHEKLEMSLLKDPFFSTILTGKLPGDLDESDPSYNFLF 819
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 224 ASHPGAHAVVNDNDGKRY-LDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPK 400
A H H D+ +R+ +D G + +G +N+A KDQ +L +TN+ R +
Sbjct: 276 AEHGSNHTEEGDDLTRRFGVDALEG--NLDIGSAEQSINSATKDQQAILHTSTNVSRPSE 333
Query: 401 I 403
I
Sbjct: 334 I 334
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 437 PGDLNVVYLVNSGSEANELATLLAKVHRKPRHHIAADQLPRLHQQPHGL 583
P D+ + + SGS + A VHR RH AA Q P LH PH L
Sbjct: 533 PSDVILATMPKSGSTWLK-ALAFCVVHRG-RHAPAAGQHPLLHSSPHDL 579
>08_02_0459 + 17420156-17420976,17422291-17424199
Length = 909
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 479 LIHCSLNIPRSNPPGA*RLIVRRTHRFS 396
L+H LNIPR P RL++ H FS
Sbjct: 795 LLHLHLNIPRGEPGYEDRLLISGCHGFS 822
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 342 PSKINSMYCGIRPTCTDIRKSM 407
PSK++S++CG + CT +K++
Sbjct: 90 PSKLSSVFCGTQDKCTACKKTV 111
>04_04_1638 + 34974369-34974764
Length = 131
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 83 RQNVQHGQNAADGFRAQTVHGTFVPTSRTNERSLHAAFNHERL*EAGASH 232
R HG A G R F P + R HAA +R A SH
Sbjct: 61 RHQTSHGAVAGRGLRRNRNTSMFAPPAHGEIRGAHAASKRKRKSNAADSH 110
>10_08_0585 - 18998013-18998306,18998448-18998630,18999048-18999089,
18999226-18999495,18999903-19000454,19000546-19000770,
19001435-19001640,19001738-19001936,19002166-19002381,
19002887-19002991,19003127-19003243,19003366-19003548,
19004292-19004468,19004714-19004816,19005066-19005523
Length = 1109
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/103 (25%), Positives = 47/103 (45%)
Frame = +2
Query: 218 AGASHPGAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHP 397
AG S G + +D +G F ++T +GH +PK+ A DQ+ ++ +
Sbjct: 979 AGLSILGYISSQSDGNGST---AFSQLLTF-LGHRYPKIRKAAADQVYLVLLQNDSLIAA 1034
Query: 398 KIYEYVEQLAAKLPGDLNVVYLVNSGSEANELATLLAKVHRKP 526
+ E +++ A+ + +V SE NE+A A +KP
Sbjct: 1035 ENMEKAQEVIAETCWEGDVEEARRKRSELNEMAGFGAATSQKP 1077
>06_03_0885 + 25677243-25678157,25681064-25681705
Length = 518
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 186 CKLLSFVLLVGTKVPCTVWARNPSAAFWP 100
CK+L + + GT+V VWA +WP
Sbjct: 387 CKVLGYDVPRGTQVLVNVWAIGRDPRYWP 415
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 187 M*TPFICSTCWYEGPVYGLG 128
M T ICSTC+YE V G+G
Sbjct: 1274 MSTGLICSTCYYEVEVPGVG 1293
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 311 VGHCHPKVNAALKDQLDVLWHTTNLYRH---PKIYEYVEQLAAKLPGDLNVVYLVNSGSE 481
VG P++ A +QL+ L + + H P + E ++ ++ V+ NSGSE
Sbjct: 22 VGGSEPRLVKAATEQLNKLPFYHSFWNHTTRPSLDLAKELISMFTAREMGKVFFTNSGSE 81
Query: 482 ANE 490
AN+
Sbjct: 82 AND 84
>01_05_0133 +
18452032-18452061,18452703-18452849,18452925-18453257,
18453331-18453516,18453600-18453635,18453816-18453940,
18454016-18454091,18454165-18454266
Length = 344
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 479 EANELATLLAKVHRKPRH-HIAADQLPRLHQQPHGLDGDPVV 601
+ ++A L V R PR I+ D + ++ HGLDG P++
Sbjct: 54 QMQQIADLTHGVSRYPRKKEISIDPANSIAKRVHGLDGRPII 95
>11_04_0153 + 14159820-14162417
Length = 865
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 295 NRHRLRGPLSSESKCSPQRSTRCIV 369
N HR RG L+ S S QRSTR +V
Sbjct: 482 NGHRSRGGLADNSGGSSQRSTRPLV 506
>09_04_0189 +
15438538-15438591,15438671-15438891,15438982-15439214,
15439322-15439541,15440091-15440212,15441086-15441339,
15441425-15441532,15441622-15441828,15441929-15442213,
15442312-15442467
Length = 619
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 290 GGIVTVSVGHCHPKVNAALKDQLDVLW 370
GG+V G+ H +V A D++DV+W
Sbjct: 582 GGVVHFLEGYTHHEVGAIDVDRIDVVW 608
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,123,565
Number of Sequences: 37544
Number of extensions: 469064
Number of successful extensions: 1391
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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