Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00282
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...   126   2e-29
U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical pr...    61   6e-10
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    57   1e-08
U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical p...    50   1e-06
U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical p...    50   1e-06
U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical p...    36   0.033
U29614-6|AAA68809.2|  378|Caenorhabditis elegans Hypothetical pr...    33   0.18 
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    28   5.0  
U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81521-1|CAB04226.1|  319|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    27   8.8  
CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical ...    27   8.8  

>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score =  126 bits (303), Expect = 2e-29
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = +2

Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYVEQLAAKL 436
           D++GK+YLD FGGIVTVSVGHCHPK+NAAL +Q   LWHTT++Y    IYEY E+L +K 
Sbjct: 35  DSNGKKYLDFFGGIVTVSVGHCHPKINAALTEQAQKLWHTTSIYHTEPIYEYAEKLLSKF 94

Query: 437 PGDLNVVYLVNSGSEANELATLLAK 511
           P  LN V+ VNSGSEAN+LA  LA+
Sbjct: 95  PSKLNSVFFVNSGSEANDLALALAR 119



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +3

Query: 507 RRYTGNLDIISLQTSYHGYTSSLMGLTATQSYRMAIPVPPGFYHAVHPD 653
           R YTG  D+IS++  YHG T +++G T   +++   P     + +++ D
Sbjct: 119 RNYTGRFDVISMRNGYHGMTQTVLGATNLGNWKPVFPHGFNIFKSLNAD 167


>U80931-3|AAO91701.1|  160|Caenorhabditis elegans Hypothetical
           protein T01B11.2b protein.
          Length = 160

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = +2

Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRHPKIYEYVEQLAAK 433
           D    ++LD    +    VGHCHPKV  A+  QL     T N+ +   ++ +  EQ+ + 
Sbjct: 63  DEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVSTQLTDCAEQILST 118

Query: 434 LPGDLNVVYLVNSGSEANELATLLAKVHRKPRHHIAADQLPRL 562
           LPG L+ V   NSGSEAN+LA  LA+ + K +  I  +QL  L
Sbjct: 119 LPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAIVIEQLVHL 160


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = +2

Query: 257 DNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNL-YRHPKIYEYVEQLAAK 433
           D    ++LD    +    VGHCHPKV  A+  QL     T N+ +   ++ +  EQ+ + 
Sbjct: 63  DEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQLAT--STCNVRFVSTQLTDCAEQILST 118

Query: 434 LPGDLNVVYLVNSGSEANELATLLAKVHRKPRHHIAAD 547
           LPG L+ V   NSGSEAN+LA  LA+ + K +  I  +
Sbjct: 119 LPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAIVIE 155


>U41534-14|AAV34796.1|  226|Caenorhabditis elegans Hypothetical
           protein C16A3.10c protein.
          Length = 226

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 31/92 (33%), Positives = 47/92 (51%)
 Frame = +2

Query: 236 GAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYV 415
           G    V D +GK+Y D       V+ GHCHPK+   +++Q   L  T+  + +  + EY 
Sbjct: 46  GEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNNVLGEY- 104

Query: 416 EQLAAKLPGDLNVVYLVNSGSEANELATLLAK 511
           E+   KL    + V  +N+G EA E A  LA+
Sbjct: 105 EEYVTKL-FKYDKVLPMNTGVEACESAVKLAR 135


>U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical
           protein C16A3.10a protein.
          Length = 422

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 31/92 (33%), Positives = 47/92 (51%)
 Frame = +2

Query: 236 GAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLYRHPKIYEYV 415
           G    V D +GK+Y D       V+ GHCHPK+   +++Q   L  T+  + +  + EY 
Sbjct: 46  GEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNNVLGEY- 104

Query: 416 EQLAAKLPGDLNVVYLVNSGSEANELATLLAK 511
           E+   KL    + V  +N+G EA E A  LA+
Sbjct: 105 EEYVTKL-FKYDKVLPMNTGVEACESAVKLAR 135


>U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical
           protein C16A3.10b protein.
          Length = 357

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +2

Query: 236 GAHAVVNDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 382
           G    V D +GK+Y D       V+ GHCHPK+   LKD   V+    N
Sbjct: 46  GEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91


>U29614-6|AAA68809.2|  378|Caenorhabditis elegans Hypothetical
           protein F18E9.3 protein.
          Length = 378

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = +3

Query: 129 PRPYTGPSYQQVEQMK-GVYMPPSITNAYKKPVLLTQG---HMQWLTTTTARDTWICSVE 296
           PRP T P    +  ++  V  PP+ T     P   TQ      QW  TTT+   W+    
Sbjct: 199 PRPLTTPRQWTIRGIRIRVTRPPASTTTTPTPTTTTQSPNTRAQWWKTTTSASRWVAGPR 258

Query: 297 SSP 305
             P
Sbjct: 259 HPP 261


>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
           protein K07E3.1 protein.
          Length = 1061

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 105 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 221
           K+ P  + P+   G  YQQ++Q      PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 254 NDNDGKRYLDLFGGIVTV 307
           ND++ K +LD FGGI+T+
Sbjct: 278 NDSETKGFLDRFGGIITI 295


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 254 NDNDGKRYLDLFGGIVTV 307
           ND++ K +LD FGGI+T+
Sbjct: 278 NDSETKGFLDRFGGIITI 295


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +2

Query: 254 NDNDGKRYLDLFGGIVTV 307
           ND++ K +LD FGGI+T+
Sbjct: 278 NDSETKGFLDRFGGIITI 295


>U39644-1|AAA80359.2|  393|Caenorhabditis elegans Hypothetical
           protein T10E10.3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 179 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 51
           SFH   L   R+R R     R R    + RSDDV A   S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239


>Z93384-1|CAB07633.3|  342|Caenorhabditis elegans Hypothetical
           protein H08M01.1 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -1

Query: 524 VSCVPSPAKSPVH*LLIHCSLNIP---RSNPP 438
           V  +P PA+SP H +  H +  +P   R NPP
Sbjct: 52  VQALPIPAQSPEHLVAEHSNAQVPVDARPNPP 83


>Z81521-1|CAB04226.1|  319|Caenorhabditis elegans Hypothetical
           protein F32A11.1 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +3

Query: 147 PSYQQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLTTTTARDTWICSVESSPSPWAIVI 326
           P+  QV+ +K +   P+ +    + ++  +   +       RDTW+ SV+S PS    +I
Sbjct: 192 PAPDQVKHLKSLQTIPAYSRLISRLLMSEKVADRRGVGVWERDTWVESVQSYPSQVTGII 251

Query: 327 R 329
           R
Sbjct: 252 R 252


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 28  QQRNTSKWLIEEQNYASTSSERTARPKCRRRISCPDRTRDLRTNK 162
           ++R  S+     ++ + ++S R  R K RRR    DR+RD R  K
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEK 504


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = +1

Query: 109 CRRRISCPDRTRDLRTNK*NK*KEFTCRLQSRTPIRSRCFSPRGTCSG*RQRRQEIPGSV 288
           C   ++CPDR + + T      K   C  Q      S C +     SG    +Q +P  +
Sbjct: 59  CSGFVTCPDRCQPMCTQACVMAKTSVCVDQCMPKCDSACINL--VRSGPSCDQQCMPLCL 116

Query: 289 RWNRHRLRGPLSSESKCSPQRSTRCI 366
               + ++GP     +C P  S+ CI
Sbjct: 117 PACINAIQGPTECAPQCMPSCSSNCI 142


>CU457741-1|CAM36342.1|  347|Caenorhabditis elegans Hypothetical
           protein C42C1.1 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = -2

Query: 157 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 44
           W+ G + G+G  + GG+LA  L ++  S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,409,307
Number of Sequences: 27780
Number of extensions: 378228
Number of successful extensions: 1018
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)