Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00281
         (518 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1FLC9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q8II98 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  

>UniRef50_Q1FLC9 Cluster: Putative uncharacterized protein; n=1;
           Clostridium phytofermentans ISDg|Rep: Putative
           uncharacterized protein - Clostridium phytofermentans
           ISDg
          Length = 854

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +2

Query: 23  KKIKKLNYDASLTKLHANWKIYYIKTA 103
           +K+KK+N+D  LT  ++N + YY KT+
Sbjct: 608 EKVKKINFDEYLTSYYSNTEYYYSKTS 634


>UniRef50_Q8II98 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 682

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 396 NKDFISKHILFVI*NLYFSFIF*GGSQFTHSREYNVGIFINDTIVLIYPSTVCQRFKSNV 217
           N +   K +L++  + Y+SF+F G S F H   Y++  FI   +  I    V + +  N+
Sbjct: 513 NLEIPMKFLLYI--SKYYSFVFKGKSFFQHMIPYHISTFIISNLAHIIAHHVFKYYNENI 570


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,354,089
Number of Sequences: 1657284
Number of extensions: 7922099
Number of successful extensions: 12950
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12945
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)