Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00281
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    25   2.0  
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    25   2.0  
Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precurso...    23   4.7  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   4.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   4.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.1  

>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 227 LNR*QTVLGYIRTIVSLIKIPTL 295
           LNR    LG IR   S +K+PTL
Sbjct: 75  LNRSNIALGRIRPYPSAVKMPTL 97


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 227 LNR*QTVLGYIRTIVSLIKIPTL 295
           LNR    LG IR   S +K+PTL
Sbjct: 75  LNRSNIALGRIRPYPSAVKMPTL 97


>Z22930-4|CAA80516.1|  267|Anopheles gambiae Trypsinogen precursor
           of ANTRYP7 protein.
          Length = 267

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 190 NNAYVFSSCYF-EAMRSFAITLFLNLSRHTGGFDIVN 83
           N+ +V ++ +  + +++F +T+ L  SRH     +VN
Sbjct: 73  NSKWVLTAAHCTDGLQAFTLTVRLGSSRHASSGTVVN 109


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 125 EQCNRKTSHGFKITGTEHVSIVLFLFNYFS*TLLL 229
           E C   T HG K  GT  VS+ L    YF  T L+
Sbjct: 38  EYCLNTTIHGLKYIGT--VSLTLCERAYFFLTFLV 70


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 125 EQCNRKTSHGFKITGTEHVSIVLFLFNYFS*TLLL 229
           E C   T HG K  GT  VS+ L    YF  T L+
Sbjct: 38  EYCLNTTIHGLKYIGT--VSLTLCERAYFFLTFLV 70


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = -3

Query: 516 KIIILSFGCHLYILTENSSKSSL 448
           KI++ +F CH +++ E + +++L
Sbjct: 89  KIVLKNFMCHRHMVVEFNKRANL 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,695
Number of Sequences: 2352
Number of extensions: 8566
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)