Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00281
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13203-1|AAB50574.1|  351|Homo sapiens forkhead box L1 protein.        30   5.6  
BC029778-1|AAH29778.2|  283|Homo sapiens forkhead box I1 protein.      30   5.6  
AY707089-1|AAU12169.1|  256|Homo sapiens FOXI1 protein protein.        30   5.6  

>L13203-1|AAB50574.1|  351|Homo sapiens forkhead box L1 protein.
          Length = 351

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 121 NLSRHTGGFDIVN-FPISMQFR*GSVIVQFFYFFY 20
           NLS H+GG D  N  P +M    GSV+ QF   FY
Sbjct: 300 NLSNHSGGGDWANPMPTNMLSYGGSVLSQFSPHFY 334


>BC029778-1|AAH29778.2|  283|Homo sapiens forkhead box I1 protein.
          Length = 283

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 121 NLSRHTGGFDIVN-FPISMQFR*GSVIVQFFYFFY 20
           NLS H+GG D  N  P +M    GSV+ QF   FY
Sbjct: 232 NLSNHSGGGDWANPMPTNMLSYGGSVLSQFSPHFY 266


>AY707089-1|AAU12169.1|  256|Homo sapiens FOXI1 protein protein.
          Length = 256

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 121 NLSRHTGGFDIVN-FPISMQFR*GSVIVQFFYFFY 20
           NLS H+GG D  N  P +M    GSV+ QF   FY
Sbjct: 205 NLSNHSGGGDWANPMPTNMLSYGGSVLSQFSPHFY 239


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,748,544
Number of Sequences: 237096
Number of extensions: 1192081
Number of successful extensions: 2161
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)