Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00280
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0411 + 17849061-17849436,17849514-17849776,17850491-17851081 32 0.41
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 31 0.94
03_05_0920 - 28812796-28813325,28814019-28816377 29 2.9
12_02_0927 + 24473634-24474236,24474464-24474518,24474579-24474952 29 5.0
12_02_0278 - 16693580-16693591,16693592-16694476 29 5.0
12_01_1003 - 10164751-10165647 29 5.0
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 29 5.0
12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810 29 5.0
11_06_0642 + 25755000-25755896 29 5.0
10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648 29 5.0
10_05_0111 + 9257161-9257931 29 5.0
10_02_0179 - 6268449-6268508,6268594-6269406 29 5.0
10_01_0016 + 190329-191210,206896-207033,208029-208103,208533-20... 29 5.0
09_03_0200 + 13452247-13453170 29 5.0
09_03_0025 - 11665969-11666417,11666490-11666594,11666667-116668... 29 5.0
08_02_1029 - 23768228-23768548,23768635-23769519 29 5.0
08_02_0542 + 18374810-18375694,18375781-18376098 29 5.0
08_02_0397 + 16664990-16665874,16665961-16666005 29 5.0
08_01_0831 + 8086470-8087354,8087441-8087730,8096373-8096412,809... 29 5.0
08_01_0761 - 7296069-7296169,7296516-7296703,7297016-7297026,729... 29 5.0
07_03_1434 + 26529043-26529927,26530385-26530742,26530820-265310... 29 5.0
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527... 29 5.0
07_02_0030 + 12002825-12003510,12003654-12003708,12003911-120039... 29 5.0
07_01_1077 - 9687394-9687515,9696615-9696733,9696815-9697104,969... 29 5.0
06_03_0573 + 22407489-22408373,22408460-22408795 29 5.0
06_03_0271 - 19041491-19042069 29 5.0
06_03_0121 + 16864735-16865619,16865706-16866026 29 5.0
05_04_0117 + 18136189-18137073,18137160-18137516 29 5.0
05_03_0295 - 11830767-11831309,11831820-11831951,11832322-118323... 29 5.0
05_03_0148 + 8922959-8923855 29 5.0
04_04_1671 + 35231546-35232430,35232517-35232837 29 5.0
04_04_0957 - 29670097-29670135,29670136-29671020 29 5.0
04_03_0266 + 13648287-13649099,13649186-13649524 29 5.0
04_03_0164 + 12136693-12137589 29 5.0
04_03_0155 - 11960973-11961896 29 5.0
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 29 5.0
04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339 29 5.0
03_04_0038 - 16718024-16718368,16718455-16719339 29 5.0
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 29 5.0
03_01_0166 + 1362254-1363138,1363225-1363545 29 5.0
01_06_1605 + 38575666-38576205 29 5.0
01_02_0102 - 11148219-11148563,11148650-11149534 29 5.0
01_01_1082 - 8516525-8517409 29 5.0
01_01_0649 - 4939939-4940835 29 5.0
>07_03_0411 + 17849061-17849436,17849514-17849776,17850491-17851081
Length = 409
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 358 TRTGGRAKAQLEGVGFASSCSNASKGDLTTQEQLLAKEST-TGSESRPAEKIRPETRRAD 182
TR G+ K VG ++ N G T +E+ A T TGS P ++ P TR+ +
Sbjct: 22 TRAAGKPKTTA-AVGARAARGNKQAGAATKREEATAPAITSTGSSQSPPPEVEPSTRKVE 80
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 31.1 bits (67), Expect = 0.94
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 412 FMPTEPTTGEWAVVLILEYTSSTLVAETILTNWRYKYSG*WYLILYRIPYLVML 573
F+P PT G W VV +T T+ ++ K+ W L L +P V+L
Sbjct: 178 FVPA-PTRGTWMVVFSAFWTVGTIFEASLAWTVMPKFGWRWLLALSAVPSFVLL 230
>03_05_0920 - 28812796-28813325,28814019-28816377
Length = 962
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = -1
Query: 319 VGFASSCSNASKGDLTTQEQLLAKESTTGSESRPAEKIRPETRRADAWVRLQVEQNNLYG 140
+GF+ S S A T Q+ +LA + TG+ + E A + + NNLYG
Sbjct: 392 MGFSGSISPAIGKITTLQKLILADNNITGT-------VPKEVAALPALTEVDLSNNNLYG 444
Query: 139 VLSASF*LLIRVKVNSN 89
L + VK N N
Sbjct: 445 KLPTFAAKNVLVKANGN 461
>12_02_0927 + 24473634-24474236,24474464-24474518,24474579-24474952
Length = 343
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>12_02_0278 - 16693580-16693591,16693592-16694476
Length = 298
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>12_01_1003 - 10164751-10165647
Length = 298
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810
Length = 401
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>11_06_0642 + 25755000-25755896
Length = 298
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHASWFY 167
>10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648
Length = 400
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>10_05_0111 + 9257161-9257931
Length = 256
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>10_02_0179 - 6268449-6268508,6268594-6269406
Length = 290
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 118 RGTLSQKYFSMPFKTSNKGWHANWFY 143
>10_01_0016 +
190329-191210,206896-207033,208029-208103,208533-208639,
209193-209250,210183-210242,210320-210394,210504-210641,
211766-211820,212134-212256,212645-212883
Length = 649
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>09_03_0200 + 13452247-13453170
Length = 307
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>09_03_0025 -
11665969-11666417,11666490-11666594,11666667-11666856,
11666933-11667120,11667240-11667571,11667654-11667940,
11668027-11668911
Length = 811
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>08_02_1029 - 23768228-23768548,23768635-23769519
Length = 401
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>08_02_0542 + 18374810-18375694,18375781-18376098
Length = 400
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>08_02_0397 + 16664990-16665874,16665961-16666005
Length = 309
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>08_01_0831 +
8086470-8087354,8087441-8087730,8096373-8096412,
8096878-8096957,8099643-8099733,8099989-8100052,
8100553-8100818
Length = 571
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHASWFY 167
>08_01_0761 -
7296069-7296169,7296516-7296703,7297016-7297026,
7297521-7297811,7298623-7298665,7309343-7309632,
7309719-7310603
Length = 602
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>07_03_1434 +
26529043-26529927,26530385-26530742,26530820-26531007,
26531082-26531271,26531343-26531447,26531521-26531597,
26531628-26531972
Length = 715
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>07_03_0423 +
18035688-18036572,18036659-18036978,18052618-18052724,
18053001-18053104,18054129-18054328,18054422-18054522,
18054695-18054841,18055007-18055166,18055287-18055368,
18056070-18056336,18056846-18056973,18057513-18057672
Length = 886
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>07_02_0030 +
12002825-12003510,12003654-12003708,12003911-12003996,
12004093-12004433,12004512-12004699,12004776-12004962,
12005035-12005139,12005202-12005239,12005369-12005653
Length = 656
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>07_01_1077 -
9687394-9687515,9696615-9696733,9696815-9697104,
9697191-9698075
Length = 471
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>06_03_0573 + 22407489-22408373,22408460-22408795
Length = 406
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>06_03_0271 - 19041491-19042069
Length = 192
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 118 RGTLSQKYFSMPFKTSNKGWHANWFY 143
>06_03_0121 + 16864735-16865619,16865706-16866026
Length = 401
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>05_04_0117 + 18136189-18137073,18137160-18137516
Length = 413
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>05_03_0295 -
11830767-11831309,11831820-11831951,11832322-11832375,
11842285-11843169
Length = 537
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>05_03_0148 + 8922959-8923855
Length = 298
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>04_04_1671 + 35231546-35232430,35232517-35232837
Length = 401
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>04_04_0957 - 29670097-29670135,29670136-29671020
Length = 307
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 118 RGTLSQKYFSMPFKTSNKGWHANWFY 143
>04_03_0164 + 12136693-12137589
Length = 298
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>04_03_0155 - 11960973-11961896
Length = 307
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>04_01_0451 +
5845249-5846133,5846220-5846509,5855590-5856060,
5856898-5857063,5857100-5857498,5858031-5858075
Length = 751
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339
Length = 503
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>03_04_0038 - 16718024-16718368,16718455-16719339
Length = 409
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 120 RGTLSQKYFSMPFKTSNKGWHANWFY 145
>03_01_0166 + 1362254-1363138,1363225-1363545
Length = 401
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>01_06_1605 + 38575666-38576205
Length = 179
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>01_02_0102 - 11148219-11148563,11148650-11149534
Length = 409
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
>01_01_1082 - 8516525-8517409
Length = 294
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 141 RGTLSQKYFSMPFKTSNKGWHANWFY 166
>01_01_0649 - 4939939-4940835
Length = 298
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 474 RGVFQDEYYC-PFSSSRLGWHKGLFY 400
RG +Y+ PF +S GWH FY
Sbjct: 142 RGTLSQKYFSMPFKTSNKGWHANWFY 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,799,791
Number of Sequences: 37544
Number of extensions: 354551
Number of successful extensions: 794
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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