Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00280
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   3.9  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    23   3.9  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    23   3.9  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    23   3.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.8  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 489 GYKGRRGVFQDEYY 448
           G +G++  F DEYY
Sbjct: 94  GMRGKKASFDDEYY 107


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 489 GYKGRRGVFQDEYY 448
           G +G++  F DEYY
Sbjct: 95  GMRGKKASFDDEYY 108


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 489 GYKGRRGVFQDEYY 448
           G +G++  F DEYY
Sbjct: 94  GMRGKKASFDDEYY 107


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 489 GYKGRRGVFQDEYY 448
           G +G++  F DEYY
Sbjct: 94  GMRGKKASFDDEYY 107


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 151 CSAQLAA*PMHQLAEFLAGSSQQVAIPI 234
           C AQ    P+H+  +F+ GSS++  + +
Sbjct: 234 CPAQGFPVPVHRWYKFIEGSSRRQPVQL 261


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,235
Number of Sequences: 438
Number of extensions: 3580
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)