Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00279
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K0N9 Cluster: Putative uncharacterized protein; n=1; ...    37   0.59 
UniRef50_Q8ILA3 Cluster: Putative uncharacterized protein; n=2; ...    34   3.1  
UniRef50_A6LL51 Cluster: Putative uncharacterized protein precur...    33   9.5  

>UniRef50_A5K0N9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1704

 Score = 36.7 bits (81), Expect = 0.59
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
 Frame = +1

Query: 526 LNGHCNNNILLEQLNFNVI--NLFKVKTFPNTA-KC---VLMTVTSFAFLSQTERYKNTY 687
           LN  CNN+ILL++ N N+I  N  K+K F  T   C    L+T+  F    Q  + K+TY
Sbjct: 775 LNNMCNNSILLKRSNRNIICLNELKMKLFAKTLDDCPGMFLLTLLFFINTPQKLKSKHTY 834

Query: 688 FCVKF 702
              K+
Sbjct: 835 ILSKY 839


>UniRef50_Q8ILA3 Cluster: Putative uncharacterized protein; n=2;
            cellular organisms|Rep: Putative uncharacterized protein
            - Plasmodium falciparum (isolate 3D7)
          Length = 1898

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = +1

Query: 520  IRLNGHCNNNILLEQLNFNVI--NLFKVKTFPNTA-KC---VLMTVTSFAFLSQTERYKN 681
            I LN  CN NILL++ N +VI  N  K+K F  T   C    L+ +  F    Q  + K+
Sbjct: 809  IFLNNMCNRNILLQRYNRHVICLNDLKMKLFAKTVDDCHGMFLLILLFFMNTPQKIKCKH 868

Query: 682  TYFCVKF 702
            TY   K+
Sbjct: 869  TYILTKY 875


>UniRef50_A6LL51 Cluster: Putative uncharacterized protein
           precursor; n=1; Thermosipho melanesiensis BI429|Rep:
           Putative uncharacterized protein precursor - Thermosipho
           melanesiensis BI429
          Length = 238

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 363 NRTMIVCNYLSY*NNRILILNSLRIDNNEQFVL*FPYAVKYPPYCIYV-L*HNLA 202
           N    V N + Y +NR+  L + ++ ++E  +L  P   +Y PY ++V L  NLA
Sbjct: 155 NNIKYVINRVIYEDNRLRYLTNNKVKSDEVEILLIPKGYRYSPYFVFVILIENLA 209


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,944,024
Number of Sequences: 1657284
Number of extensions: 11724720
Number of successful extensions: 23148
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23138
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)