Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00279
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.4  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.8  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.8  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 610 NTAKCVLMTVTSFAFLSQTERYKNTYFCVKFNII 711
           N+ KC+   +T    LS +   K   +C+ F  I
Sbjct: 13  NSLKCITKVLTILGLLSCSFPKKKLVYCIIFGAI 46


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 156 SVQFLKTFGIELICINIISPVFF 88
           S+ F K F I ++   +I+P+FF
Sbjct: 77  SLSFYKAFKIGILLNQLITPLFF 99


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 610 NTAKCVLMTVTSFAFLSQTERYKNTYFCVKFNII 711
           N+ KC+   +T    LS +   K   +C+ F  I
Sbjct: 9   NSLKCITKVLTILGLLSCSFPKKKLVYCIIFGAI 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 493 IKKNVLSLMSRIWRN*SVYQILHLTIFISLVAEIKFTSYDVTNQSYY 353
           I  N+  L    ++  SV Q ++    + L+  I  + +DV  Q+YY
Sbjct: 226 ISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYY 272


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -2

Query: 493 IKKNVLSLMSRIWRN*SVYQILHLTIFISLVAEIKFTSYDVTNQSYY 353
           I  N+  L    ++  SV Q ++    + L+  I  + +DV  Q+YY
Sbjct: 226 ISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYY 272


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 433 ILHLTIFISLVAE 395
           +L LT+F++LVAE
Sbjct: 250 LLSLTVFLNLVAE 262


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 433 ILHLTIFISLVAE 395
           +L LT+F++LVAE
Sbjct: 250 LLSLTVFLNLVAE 262


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 433 ILHLTIFISLVAE 395
           +L LT+F++LVAE
Sbjct: 250 LLSLTVFLNLVAE 262


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 433 ILHLTIFISLVAE 395
           +L LT+F++LVAE
Sbjct: 250 LLSLTVFLNLVAE 262


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -2

Query: 433 ILHLTIFISLVAE 395
           +L LT+F++LVAE
Sbjct: 250 LLSLTVFLNLVAE 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,033
Number of Sequences: 336
Number of extensions: 3423
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)