Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00279
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    29   4.5  

>Z71265-3|CAA95835.2|  403|Caenorhabditis elegans Hypothetical
           protein M05B5.3 protein.
          Length = 403

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 74  DHIYEKNTGDIIFMHINSIPNVFRNCTLLMR 166
           +H+ EKN+ ++I   +N +PN    C+ + R
Sbjct: 35  NHVIEKNSKEVIVRQVNEVPNDEVGCSPIPR 65


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = +3

Query: 192 VSSVLNCVIVHKCNRVGI*LHTEIKVQIVHYCLFSDYSVLKYGYFNMI 335
           ++S+++CVI+  C        T ++  + +  +FS YS+L   +  MI
Sbjct: 114 IASIISCVIISAC--------TSMRTSVTYLLIFSTYSLLPMSFMLMI 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,323
Number of Sequences: 27780
Number of extensions: 309607
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)