Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00277
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   5.4  
AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450 pr...    23   7.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   9.4  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 239 YTKLVTKRNSCIQCVHVNNSRHNRQYR 319
           +  L+TK+ S + C HV  +  +++YR
Sbjct: 705 FAYLLTKKLSLLVCGHVTKTHVSQKYR 731


>AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450
           protein.
          Length = 102

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 329 YLLHENNFTFWRPSQFRRNR 388
           Y+LH N   F  P QFR  R
Sbjct: 14  YMLHHNPEYFPEPDQFRPER 33


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 338 GASRRRAGIGDCACCC*HGHIECKSYVLSPVLYM 237
           G+  R  G+GDC   C   + E     L  VLY+
Sbjct: 175 GSENRVEGVGDCLIKCAVENGEIIEITLRGVLYV 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,725
Number of Sequences: 2352
Number of extensions: 14016
Number of successful extensions: 73
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)