BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00277 (706 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 42 4e-04 Z71267-6|CAA95850.3| 374|Caenorhabditis elegans Hypothetical pr... 42 6e-04 AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 41 0.001 Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 40 0.001 Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical pr... 40 0.002 Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical pr... 40 0.002 U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 39 0.003 AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical ... 39 0.003 AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical ... 39 0.004 U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 38 0.007 U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 38 0.007 Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 38 0.009 Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 38 0.009 Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical pr... 37 0.012 Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical pr... 37 0.012 Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical pr... 36 0.021 Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 36 0.028 Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical pr... 36 0.028 AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 36 0.028 Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical pr... 36 0.037 AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical ... 35 0.065 AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 35 0.065 Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 34 0.086 Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 34 0.086 U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical pr... 34 0.11 AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical ... 34 0.11 AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical ... 34 0.11 Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical pr... 32 0.35 Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical pr... 32 0.46 AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 31 0.61 Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 31 0.80 Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 31 0.80 Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical pr... 31 0.80 Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical p... 30 1.9 AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical ... 29 2.4 Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 4.3 Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical pr... 29 4.3 U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 29 4.3 U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 29 4.3 AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical ... 29 4.3 AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 29 4.3 Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 5.7 Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 5.7 X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 5.7 AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 28 5.7 AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 28 5.7 AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 28 5.7 Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 27 9.9 Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 27 9.9 AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 27 9.9 AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical ... 27 9.9 >U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein ZK783.1 protein. Length = 2585 Score = 41.9 bits (94), Expect = 4e-04 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Frame = +3 Query: 276 NVSMLTTAGTIA--NTGPPPTCSMRIISRSGDQVSSAEIGENLVLQVDVQPSSIYGGFAR 449 NVS L T T+ N+ P C + + + +SSA +G+ L L ++V PS +G R Sbjct: 2465 NVSELATTSTLTEKNSTLAPICRLSVSNDQHSSISSAMVGDTLKLALEVTPSENFGILPR 2524 Query: 450 SCVA 461 +C A Sbjct: 2525 NCFA 2528 Score = 35.9 bits (79), Expect = 0.028 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Frame = +1 Query: 19 DFNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVHV-NGLASFVLVMQTHL 195 DF G ++VK +++ C K + F V F C + + N + +V+Q H Sbjct: 2378 DFEGKIFVKGQAENPYCSKSFSSLLNSRKPYVFKVVFQHCDVQLLDNHTMASTVVVQKHA 2437 Query: 196 KLVTSTTKAFHIKCIYKTGDK 258 +T+ ++ ++C Y G + Sbjct: 2438 MFLTNKADSYDLRCQYPIGSR 2458 >Z71267-6|CAA95850.3| 374|Caenorhabditis elegans Hypothetical protein W01A8.3 protein. Length = 374 Score = 41.5 bits (93), Expect = 6e-04 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 8/65 (12%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALR--AAFNAFKFPSSDNIRFQCNIRVC---FGKC--- 664 D DGCA DP + E S D S +R A+ FK+ S+ + F C IR+C G C Sbjct: 215 DFDGCATDPFLLS--ELSYDASLMRAHASSQVFKYADSNQLYFTCQIRLCQKQMGMCQEV 272 Query: 665 VPVNC 679 P NC Sbjct: 273 TPPNC 277 Score = 34.7 bits (76), Expect = 0.065 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 7/88 (7%) Frame = +1 Query: 16 KDFNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVHVNGL----ASFVL-- 177 K F G ++VK +KD+ CR+ +++ G CG+ + +F++ Sbjct: 52 KPFRGNIFVKGRAKDKSCRQSYANNGTNS----YSLPLGKCGMQRLRSANPRGVNFMVTV 107 Query: 178 VMQTH-LKLVTSTTKAFHIKCIYKTGDK 258 ++ H +T +AFH+KC Y D+ Sbjct: 108 IVSFHPAGFITKNDRAFHVKCFYMEPDE 135 >AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical protein Y53H1B.1 protein. Length = 403 Score = 40.7 bits (91), Expect = 0.001 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 DE GCA DP I + ++D + A N FKF + FQC + C Sbjct: 215 DEHGCAIDPLILPDLTYNKDNNVAYAQVNTFKFADKVSTYFQCAVSTC 262 >Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical protein F52B11.3 protein. Length = 741 Score = 40.3 bits (90), Expect = 0.001 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +2 Query: 512 EDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGK--CVPVNCRG 685 E+GC + PA+ G E+ D + L++ AF+ S +++ C+I C G C NC Sbjct: 577 ENGCPRYPALVGPVEQDFDKNRLKSDLRAFRLDGSYDVQIVCSIMFCAGPNGCPVSNCLD 636 Query: 686 S 688 S Sbjct: 637 S 637 Score = 29.1 bits (62), Expect = 3.2 Identities = 15/67 (22%), Positives = 30/67 (44%) Frame = +3 Query: 261 VTLAFNVSMLTTAGTIANTGPPPTCSMRIISRSGDQVSSAEIGENLVLQVDVQPSSIYGG 440 VT + S T T PP + ++I+++ + + A IG+ L+L + + + + Sbjct: 495 VTTIYEASSQNTTVLDVATPPPVSAELQILNQLEEPLHKASIGDPLLLVITSEQAGPHNM 554 Query: 441 FARSCVA 461 C A Sbjct: 555 MVTECTA 561 >Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical protein Y53C12B.6 protein. Length = 382 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCF----GKCVPVN 676 DE+GC D + + E A+ +AFKF + + F+CNIR+ G+C N Sbjct: 223 DENGCTTDGELLSPIKYKEGSMRAAASSHAFKFVDNHIVYFKCNIRITVKNPSGECPVNN 282 Query: 677 CRGSDAYG 700 C + + G Sbjct: 283 CSPNGSTG 290 Score = 28.7 bits (61), Expect = 4.3 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCR-KVVEMPKDEESFVFFTVHFGDCG------LVHVNGLA-SFVL 177 F G L+++ + + C+ P SF F F DC +V G+ S VL Sbjct: 44 FKGALFLRGSADKKSCKANFSAQPSQNISFEF---GFDDCPSRRKRQIVAPRGMTMSSVL 100 Query: 178 VMQTHLKLVTSTTKAFHIKCIYK 246 V+ H ++T A+ I C Y+ Sbjct: 101 VVSYHGSIITHRDVAYQIDCFYR 123 >Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical protein T04F8.4 protein. Length = 384 Score = 39.5 bits (88), Expect = 0.002 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 9/91 (9%) Frame = +1 Query: 16 KDFNGLLYVK-SYSKDERCRKVVEMPKDE--ESFVFFTVHFGDCGLVHVNGLA------S 168 K FNG +YVK SY++ E CR V KD+ ++ G C + +A S Sbjct: 51 KQFNGKVYVKGSYNRPE-CR-VDYSTKDQFGRPVGGIKLNHGACNMDRQRMIAPEGMMFS 108 Query: 169 FVLVMQTHLKLVTSTTKAFHIKCIYKTGDKT 261 VL++ H +T KA+HI+C+YK +T Sbjct: 109 TVLIISFHPLFLTRMDKAYHIRCMYKEAART 139 Score = 35.1 bits (77), Expect = 0.049 Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSED-GSALRAAFNAFKFPSSDNIRFQCNIRVCF---GKC---V 667 DE GC D + G+ E A R +F FKF +RFQC IR+C G C Sbjct: 218 DERGCHTDRLLLGDPTYVEALNMAYRESF-VFKFADRIAVRFQCEIRLCLKDDGGCDGIT 276 Query: 668 PVNCRGSDA 694 P C DA Sbjct: 277 PPMCSFKDA 285 >U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical protein K06A1.3 protein. Length = 488 Score = 39.1 bits (87), Expect = 0.003 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = +2 Query: 512 EDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC---FGKCVPVNCR 682 E+GC++D I +E+ + NAF FP +N+R C I VC G C C Sbjct: 207 ENGCSEDIYIMPNLIYNENRTKAFVNSNAFNFPDQNNVRISCKISVCPTLSGTCHQPKCD 266 Query: 683 GS 688 S Sbjct: 267 AS 268 >AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical protein T21H3.4 protein. Length = 518 Score = 39.1 bits (87), Expect = 0.003 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVNCRGS 688 D++GC+ D I E + + AF+F +S+++ F+C I VC V +CR S Sbjct: 328 DDNGCSLDEEIIPTPEYDIENGVIYTPSKAFRFANSNHVHFKCMISVC--SAVDPSCRNS 385 >AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical protein Y55D5A.6 protein. Length = 284 Score = 38.7 bits (86), Expect = 0.004 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +2 Query: 512 EDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGK 661 E+GC+ D + + S+D S + A AFKFP + +C +R C K Sbjct: 127 ENGCSLDEELISDTTYSQDFSKIYATSLAFKFPEEYEVFIRCAVRTCVKK 176 >U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (drosophila nompa:no mechanoreceptor potential a) protein 1, isoform b protein. Length = 1069 Score = 37.9 bits (84), Expect = 0.007 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 596 AFKFPSSDNIRFQCNIRVCFGKCVPVNC 679 AF+F SS +IR C + +C G C PV C Sbjct: 923 AFRFDSSASIRVTCEVEICKGDCEPVEC 950 >U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (drosophila nompa:no mechanoreceptor potential a) protein 1, isoform a protein. Length = 1065 Score = 37.9 bits (84), Expect = 0.007 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 596 AFKFPSSDNIRFQCNIRVCFGKCVPVNC 679 AF+F SS +IR C + +C G C PV C Sbjct: 919 AFRFDSSASIRVTCEVEICKGDCEPVEC 946 >Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical protein ZK265.8 protein. Length = 440 Score = 37.5 bits (83), Expect = 0.009 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Frame = +1 Query: 16 KDFNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGL-----VHVNGLA-SFVL 177 K F G +Y K ++ E C K + + F + FG CG+ V G+ + Sbjct: 47 KIFAGRIYAKGRAELEDCYKD-DFGNQKTRKPHFDLQFGACGMKSLRSVDPRGMYYGITV 105 Query: 178 VMQTHLKLVTSTTKAFHIKCIYKTGDK---T*LLHSMCPC*QQQAQSPIP 318 V+ H +T +A+H+KC ++ +K L SM P + +A+ IP Sbjct: 106 VVSFHPLFITKVDQAYHVKCFFEEANKGLTAELGVSMIPTTELEARHGIP 155 Score = 32.7 bits (71), Expect = 0.26 Identities = 15/51 (29%), Positives = 22/51 (43%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGK 661 D+ GC DP + S D A + FKF + F C +++C K Sbjct: 220 DDKGCPIDPILITGIRYSSDLQRAYAESSVFKFADKPGVWFFCQVQMCMKK 270 >Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical protein ZK265.8 protein. Length = 440 Score = 37.5 bits (83), Expect = 0.009 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Frame = +1 Query: 16 KDFNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGL-----VHVNGLA-SFVL 177 K F G +Y K ++ E C K + + F + FG CG+ V G+ + Sbjct: 47 KIFAGRIYAKGRAELEDCYKD-DFGNQKTRKPHFDLQFGACGMKSLRSVDPRGMYYGITV 105 Query: 178 VMQTHLKLVTSTTKAFHIKCIYKTGDK---T*LLHSMCPC*QQQAQSPIP 318 V+ H +T +A+H+KC ++ +K L SM P + +A+ IP Sbjct: 106 VVSFHPLFITKVDQAYHVKCFFEEANKGLTAELGVSMIPTTELEARHGIP 155 Score = 32.7 bits (71), Expect = 0.26 Identities = 15/51 (29%), Positives = 22/51 (43%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGK 661 D+ GC DP + S D A + FKF + F C +++C K Sbjct: 220 DDKGCPIDPILITGIRYSSDLQRAYAESSVFKFADKPGVWFFCQVQMCMKK 270 >Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical protein F53B6.6 protein. Length = 610 Score = 37.1 bits (82), Expect = 0.012 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Frame = +1 Query: 1 VRLKIKD---FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGL-----VHVN 156 +R+K+ FNG +YV S + C V S FT+ G C + +H Sbjct: 91 IRVKVNTEHPFNGRIYVDGESDKQHC--VQHSADAHSSPQEFTIPIGACNMRRQRTLHPR 148 Query: 157 GLA-SFVLVMQTHLKLVTSTTKAFHIKCIY 243 G++ SF ++ H VT +AF I+C + Sbjct: 149 GISFSFTMITSFHPFFVTGMDRAFSIRCFF 178 Score = 31.9 bits (69), Expect = 0.46 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCF---GKC---VP 670 D+ GC+ DP + + E + + FK+ + F C +++C+ G C P Sbjct: 265 DDRGCSTDPFLLPQIEYEHGAISAYTNAHVFKYADKVQLYFTCTVQLCYKHDGGCEGITP 324 Query: 671 VNCRG 685 C G Sbjct: 325 PQCSG 329 >Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical protein E04D5.3 protein. Length = 507 Score = 37.1 bits (82), Expect = 0.012 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGL---VHVNGLA-SFVLVMQT 189 FNG ++VK Y + C V D ++ F V CG+ +NG+ S +++ Sbjct: 58 FNGKVFVKGYVSEPSCMTV----GDGKTGHRFEVRHDSCGVRRQREINGVVISATVIISF 113 Query: 190 HLKLVTSTTKAFHIKCIYKTGDK 258 H +T +A+ + C Y G K Sbjct: 114 HSIFITKIDRAYRVSCFYVEGTK 136 >Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical protein M28.1 protein. Length = 647 Score = 36.3 bits (80), Expect = 0.021 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 D+ GC D + SEDG + + FKFP + F+C I C Sbjct: 395 DQHGCTLDQLMLQTPTYSEDGMSAQVDAYIFKFPDRSTVDFRCTITFC 442 Score = 32.3 bits (70), Expect = 0.35 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 160 LASFVLVMQTHLKLVTSTTKAFHIKCIYKTGDKT 261 + S + V+ H +T KA+HI+C Y +KT Sbjct: 282 VVSLIAVVSFHDSFITKLDKAYHIQCAYAEAEKT 315 >Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical protein T24C2.1 protein. Length = 711 Score = 35.9 bits (79), Expect = 0.028 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 DE+GC D + G+ S+ L A FKF + D R +C + C Sbjct: 200 DENGCVIDSELMGDIVYSDHVPKLYARARIFKFLTDDKYRIECTLEFC 247 >Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical protein T22C8.7 protein. Length = 609 Score = 35.9 bits (79), Expect = 0.028 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 DE GC D ++F E S+D + A AF++ + F C I C Sbjct: 216 DERGCVTDFSLFPEVSYSDDLKSAFTAVRAFRYADQVMVHFSCQITTC 263 Score = 28.7 bits (61), Expect = 4.3 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 175 LVMQTHLKLVTSTTKAFHIKCIYKTGDKT 261 +++Q H VTS KA+ + CIY+ + T Sbjct: 110 VIIQHHPLFVTSFDKAYRLNCIYRQQEST 138 >AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane protein RAM-5 protein. Length = 711 Score = 35.9 bits (79), Expect = 0.028 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 DE+GC D + G+ S+ L A FKF + D R +C + C Sbjct: 200 DENGCVIDSELMGDIVYSDHVPKLYARARIFKFLTDDKYRIECTLEFC 247 >Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical protein M142.2 protein. Length = 572 Score = 35.5 bits (78), Expect = 0.037 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVH----VNGLASFV---LV 180 F G ++V + DE CR E D S + TV F C VH +N FV +V Sbjct: 249 FEGNVFVMDHYHDEECRAGPEKFPDSRS-IGLTVPFSACN-VHRYRSLNPKGIFVEVSIV 306 Query: 181 MQTHLKLVTSTTKAFHIKCIYKTGDK 258 H +T T + ++C Y DK Sbjct: 307 FMFHSLFMTKTDQTVKVQCFYMEADK 332 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCF---GKC----V 667 D +GC D + + ++ FK+ ++FQC I +C G C Sbjct: 418 DSNGCGLDAVLLSTPDYDTSLRLATKPYHVFKYADRPVLQFQCQITLCLKYDGGCEGITP 477 Query: 668 PVNCR 682 P NC+ Sbjct: 478 PQNCK 482 >AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical protein Y55F3C.7b protein. Length = 502 Score = 34.7 bits (76), Expect = 0.065 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = +2 Query: 497 VSCNDEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVN 676 V D GCA +I G + R E + F+FP++ ++ C + C G C Sbjct: 192 VQLTDPVGCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKISCIVTECDGSCEART 250 Query: 677 C 679 C Sbjct: 251 C 251 >AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical protein Y55F3C.7a protein. Length = 500 Score = 34.7 bits (76), Expect = 0.065 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = +2 Query: 497 VSCNDEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVN 676 V D GCA +I G + R E + F+FP++ ++ C + C G C Sbjct: 192 VQLTDPVGCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKISCIVTECDGSCEART 250 Query: 677 C 679 C Sbjct: 251 C 251 >Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical protein F20D1.8 protein. Length = 405 Score = 34.3 bits (75), Expect = 0.086 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +2 Query: 491 K*VSCNDEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRV 649 K V DE+GCA D + E S D + + + FKF ++ FQC IR+ Sbjct: 244 KEVQIFDENGCAVDKYLINNLEYSSDLTGGQLS-QVFKFADQPSVFFQCKIRL 295 >Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical protein F38E11.4 protein. Length = 751 Score = 34.3 bits (75), Expect = 0.086 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 563 EDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVN 676 ++G F+F S +R +C+I VC KC PV+ Sbjct: 712 KNGEVYSTKMKVFRFDGSRRVRIKCSIDVCVEKCPPVS 749 >U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical protein F13B9.6 protein. Length = 390 Score = 33.9 bits (74), Expect = 0.11 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Frame = +3 Query: 258 NVTLAFNVSMLTTAGTIAN-TGPPPTCSMRIISR---SGDQVSSAEIGENLVLQVDVQPS 425 N T A ++ + ++ +G P +M+I+ SG V A +G+ + L + +Q + Sbjct: 130 NGTNALQITAMNDDNSVVTGSGGSPALTMQILEGHGISGSPVVKAAVGQRITLDIALQNT 189 Query: 426 SIYGGFARSCVA 461 +IY + SC A Sbjct: 190 AIYDFYVHSCYA 201 >AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical protein F54A5.2 protein. Length = 360 Score = 33.9 bits (74), Expect = 0.11 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = +2 Query: 506 NDEDGCAKDPA--IFGEWE--RSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPV 673 +D GC+ + ++G++E R + A+ FP+S+ + CN+ VC C Sbjct: 208 SDSHGCSLQTSGEVWGDFEVTRRNGKTIFYNHIKAWAFPTSNEVNIFCNLHVCV-TCTQA 266 Query: 674 NCRGSD 691 CRG + Sbjct: 267 ACRGRE 272 >AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical protein W04C9.3 protein. Length = 445 Score = 33.9 bits (74), Expect = 0.11 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 9/83 (10%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVHVNGLAS---------FV 174 F G +Y++ + + CR+ P FTV GDCG+ ++ Sbjct: 46 FIGNVYIRGFYRTPGCRRQFLAPNQAGGS--FTVRLGDCGMRRSRQISGHSPRGVNQHIT 103 Query: 175 LVMQTHLKLVTSTTKAFHIKCIY 243 V H L T ++F+I+C Y Sbjct: 104 FVANFHPNLATKEERSFNIRCFY 126 >Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical protein W06D12.1 protein. Length = 327 Score = 32.3 bits (70), Expect = 0.35 Identities = 18/57 (31%), Positives = 23/57 (40%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVNC 679 DE GC D I E E +E + FKF + F C IRV + + C Sbjct: 80 DEHGCTLDAFILKELEYNEKELEAGQMSSVFKFADKPTVFFSCMIRVEMKESAEMPC 136 >Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical protein F22B5.3 protein. Length = 389 Score = 31.9 bits (69), Expect = 0.46 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVHVNGL------ASFVLVM 183 F G +YVK + CR + + F C + L + +V+ Sbjct: 49 FEGHVYVKGLFDQQECRN----DEGGRQVAGIELPFDTCNVARTRSLNPKGVFVTTTVVV 104 Query: 184 QTHLKLVTSTTKAFHIKCIYKTGDKT 261 H + VT +A+ ++C Y DKT Sbjct: 105 SFHPQFVTKVDRAYRVQCFYMEADKT 130 >AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical protein M01E10.2 protein. Length = 1286 Score = 31.5 bits (68), Expect = 0.61 Identities = 12/48 (25%), Positives = 25/48 (52%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 D GC+ D A+ + ++D AA + F +++++F C + +C Sbjct: 1095 DPRGCSSDLALLTDLTYADDSLTAWAASHVFNVHDAESLKFVCKLSLC 1142 Score = 27.9 bits (59), Expect = 7.5 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVHV-----NGL-ASFVLVM 183 F G+ VK Y D RC+ F + +CG+ V NGL +S VL + Sbjct: 925 FRGVAVVKGYQDDARCKATASSSLPLNLF----ISNNECGVTQVKSSDPNGLNSSLVLHL 980 Query: 184 QTHLKLVTSTTKAFHIKC 237 +L T+ +A+ ++C Sbjct: 981 LHDDELNTAEDRAYLLQC 998 >Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical protein F47G9.3 protein. Length = 801 Score = 31.1 bits (67), Expect = 0.80 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = +2 Query: 554 ERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVNC 679 E E + F AF+F + ++ +C ++ C KC NC Sbjct: 676 EIKETATGFVLPFRAFRFKQGEAVKIECEVKYC-EKCKKANC 716 >Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical protein F47G9.3 protein. Length = 801 Score = 31.1 bits (67), Expect = 0.80 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = +2 Query: 554 ERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFGKCVPVNC 679 E E + F AF+F + ++ +C ++ C KC NC Sbjct: 676 EIKETATGFVLPFRAFRFKQGEAVKIECEVKYC-EKCKKANC 716 >Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical protein C47G2.1 protein. Length = 424 Score = 31.1 bits (67), Expect = 0.80 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 6/86 (6%) Frame = +1 Query: 22 FNGLLYVKSYSKDERCRKVVEMPKDEESFVFFTVHFGDCGLVHVNGL------ASFVLVM 183 F G +YVK CR + + F C L S +V+ Sbjct: 48 FEGHVYVKGLYDQAGCRS----DEGGRQVAGIELPFDSCNTARTRSLNPKGVFVSTTVVI 103 Query: 184 QTHLKLVTSTTKAFHIKCIYKTGDKT 261 H + VT +A+ I+C Y DKT Sbjct: 104 SFHPQFVTKVDRAYRIQCFYMESDKT 129 >Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical protein C55A1.8 protein. Length = 337 Score = 29.9 bits (64), Expect = 1.9 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 4/45 (8%) Frame = -2 Query: 135 ISEMYSEENKTFFV--FRHLYN--FPASLILTVTFYVQKAVEIFN 13 ++ Y+ EN F + F +YN F +S +LTV FYV +A +++ Sbjct: 99 VTSFYASENPQFMLKLFMLIYNWAFYSSQLLTVLFYVLRAAVLYS 143 >AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical protein B0511.5 protein. Length = 225 Score = 29.5 bits (63), Expect = 2.4 Identities = 12/47 (25%), Positives = 21/47 (44%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRV 649 D +GC+ D + + R AF+F + F+CN+R+ Sbjct: 166 DSEGCSLDTTRLPNLRYENNKLSARVMSKAFRFGDDVAVEFECNVRL 212 >Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical protein T23F1.5 protein. Length = 1262 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 652 DE GC+ D I + AFK P +++ +C+I +C Sbjct: 1103 DEQGCSADLQIIDHPHYDTYHDTASSHMWAFKVPDMSSLQIKCDILIC 1150 >Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical protein R07E3.3 protein. Length = 379 Score = 28.7 bits (61), Expect = 4.3 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRV 649 ++ GCA D + E D A R A + +K+ DN+ F C I + Sbjct: 213 NDKGCALDKYLLTNLEYPTDLMAGREA-HVYKYADRDNMYFDCQISI 258 >U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect protein 3, isoforma protein. Length = 1175 Score = 28.7 bits (61), Expect = 4.3 Identities = 12/45 (26%), Positives = 19/45 (42%) Frame = +2 Query: 506 NDEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCN 640 + E C DP++ W R S+L F P + + QC+ Sbjct: 1006 SQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCD 1050 >U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect protein 3, isoformb protein. Length = 1178 Score = 28.7 bits (61), Expect = 4.3 Identities = 12/45 (26%), Positives = 19/45 (42%) Frame = +2 Query: 506 NDEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCN 640 + E C DP++ W R S+L F P + + QC+ Sbjct: 1009 SQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCD 1053 >AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical protein Y7A5A.1 protein. Length = 538 Score = 28.7 bits (61), Expect = 4.3 Identities = 9/27 (33%), Positives = 20/27 (74%) Frame = +1 Query: 7 LKIKDFNGLLYVKSYSKDERCRKVVEM 87 +K+K + + Y+ +S+DE C+K++E+ Sbjct: 220 VKVKPYVHMEYIPCHSQDEYCKKIMEL 246 >AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-terminal hydrolase protein. Length = 1175 Score = 28.7 bits (61), Expect = 4.3 Identities = 12/45 (26%), Positives = 19/45 (42%) Frame = +2 Query: 506 NDEDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCN 640 + E C DP++ W R S+L F P + + QC+ Sbjct: 1006 SQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCD 1050 >Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical protein C29E6.1a protein. Length = 812 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +2 Query: 515 DGCAKDPA-IFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC-FGKCVPVNC 679 DGC D + SE G+ + + AF++ ++ +++ C +R+C F C C Sbjct: 664 DGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRICPFAPCPKNTC 718 >Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical protein C29E6.1b protein. Length = 653 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +2 Query: 515 DGCAKDPA-IFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC-FGKCVPVNC 679 DGC D + SE G+ + + AF++ ++ +++ C +R+C F C C Sbjct: 505 DGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRICPFAPCPKNTC 559 >X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. Length = 693 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +2 Query: 515 DGCAKDPA-IFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC-FGKCVPVNC 679 DGC D + SE G+ + + AF++ ++ +++ C +R+C F C C Sbjct: 545 DGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRICPFAPCPKNTC 599 >AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical protein T01A4.3 protein. Length = 710 Score = 28.3 bits (60), Expect = 5.7 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +2 Query: 215 QKHSTSNAYTKLVTKRNSCIQCVHVNNSRHNRQYR 319 +K ++ Y + N+C Q VH N+RH + R Sbjct: 467 KKMKSAKGYDGRKVECNTCFQAVHAENNRHLNELR 501 >AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical protein Y38C1AA.5a protein. Length = 599 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAF---NAFKFPSSDNIRFQCNI 643 DE+GC R++D + AFKFP D++ F C I Sbjct: 458 DENGCVIRLEFASPLHRAKDSENTMFYYLLIKAFKFPGPDDVYFSCTI 505 >AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical protein Y38C1AA.5b protein. Length = 601 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = +2 Query: 509 DEDGCAKDPAIFGEWERSEDGSALRAAF---NAFKFPSSDNIRFQCNI 643 DE+GC R++D + AFKFP D++ F C I Sbjct: 460 DENGCVIRLEFASPLHRAKDSENTMFYYLLIKAFKFPGPDDVYFSCTI 507 >Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical protein ZK632.1a protein. Length = 810 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -2 Query: 144 KAAISEMYSEENKTFFV-FRHLYNFPASLILTV 49 K+A+ E+ E T F+ +HLY F +L T+ Sbjct: 41 KSAMKELVQPEKNTIFINMQHLYKFSNNLATTI 73 >Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical protein ZK632.1a protein. Length = 810 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -2 Query: 144 KAAISEMYSEENKTFFV-FRHLYNFPASLILTV 49 K+A+ E+ E T F+ +HLY F +L T+ Sbjct: 41 KSAMKELVQPEKNTIFINMQHLYKFSNNLATTI 73 >AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication licensing factor MCM2/3/5-type protein protein. Length = 810 Score = 27.5 bits (58), Expect = 9.9 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = -2 Query: 144 KAAISEMYSEENKTFFV-FRHLYNFPASLILTV 49 K+A+ E+ E T F+ +HLY F +L T+ Sbjct: 41 KSAMKELVQPEKNTIFINMQHLYKFSNNLATTI 73 >AC006610-1|AAK85447.4| 360|Caenorhabditis elegans Hypothetical protein C30F12.1 protein. Length = 360 Score = 27.5 bits (58), Expect = 9.9 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Frame = +3 Query: 171 RSSNANSSETG-NINHKSIPHQMHIQNW*QNVTLAF----NVSMLTTAGTIANTGPPP 329 R+SN T N ++S PHQ +Q+ N ++ N ++ ++G + +TGPPP Sbjct: 13 RTSNQRGLGTRLNPYYQSTPHQPMVQSM-SNPIGSYGEQGNAQIIGSSGQVLSTGPPP 69 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,856,886 Number of Sequences: 27780 Number of extensions: 330763 Number of successful extensions: 915 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 911 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1634564590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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