Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00276
(502 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 40 2e-05
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 26 0.22
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 26 0.22
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.50
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.50
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.50
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.50
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 24 0.67
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 0.67
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 0.88
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 1.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.5
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 2.0
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 2.0
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 2.0
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 4.7
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 4.7
AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase l... 21 4.7
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 6.2
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 6.2
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 8.2
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 39.5 bits (88), Expect = 2e-05
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Frame = +1
Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQ 408
+ GRD+++ AQ+G+GKTA F + I+ + + + + +I++PTRELA QI
Sbjct: 193 LSGRDLMSCAQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIA 252
Query: 409 KVVIALGDHLNAKCHACIGGTN 474
+ K GGT+
Sbjct: 253 DQGKKFAYNSTVKVAVIYGGTS 274
Score = 29.1 bits (62), Expect = 0.023
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 149 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPSSKDAM 271
+ +F+ L+ LL + G+ KP+AIQ+ AI + S +D M
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLM 199
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 25.8 bits (54), Expect = 0.22
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 125 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKD 265
L +DWD +DD +++G GF+ P +IQ + +SK+
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKN 350
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 25.8 bits (54), Expect = 0.22
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 125 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKD 265
L +DWD +DD +++G GF+ P +IQ + +SK+
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSKN 350
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.50
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 321 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 425
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.50
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 321 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 425
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.50
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 321 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 425
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.50
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 321 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 425
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 24.2 bits (50), Expect = 0.67
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 125 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKD 265
L +DWD +DD +++G GF+ P +IQ + + K+
Sbjct: 306 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQVKVEFANEKN 349
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.67
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 498 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 355
Q+AN TD + S+A S +++ H L + + G+Q +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.8 bits (49), Expect = 0.88
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
Frame = +2
Query: 2 CG*NMSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 157
C + ++ ER+ DWP E+ K G S+ P P P + W T
Sbjct: 1131 CAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 372 PGSHKRAGPTNSEGGDSSW 428
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 1.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 372 PGSHKRAGPTNSEGGDSSW 428
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 2.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 462 WWHQCP*RYSPTG 500
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 406 QKVVIALGDHLNAKCHAC 459
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 2.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 462 WWHQCP*RYSPTG 500
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 110 FPEVHRNYLDPSMAHFW 60
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 271 HRVLG*RHYCALLDCRRFFKTIGVYASQ 188
H + G +H C++ R K GVY+ +
Sbjct: 77 HPLSGSKHLCSICGDRASGKHYGVYSCE 104
>AF260820-1|AAG02018.1| 139|Tribolium castaneum alpha-esterase like
protein E1 protein.
Length = 139
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = -1
Query: 181 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 71
FF+ ++I G +N + + V + + + +T +L W
Sbjct: 43 FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 84 KVVTMDLREWTLGHLT 131
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 84 KVVTMDLREWTLGHLT 131
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 8.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 78 RIKVVTMDLREWTLGHLTPTGIKLSKP 158
R V DLR T G L T +SKP
Sbjct: 361 RSPVTPADLRLLTRGRLVLTVSSVSKP 387
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,720
Number of Sequences: 336
Number of extensions: 2862
Number of successful extensions: 24
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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