SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00276
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical...   137   4e-33
AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical ...   137   4e-33
Z12116-1|CAA78102.1|  402|Caenorhabditis elegans protein ( C.ele...   114   3e-26
U13876-3|AAA21170.1|  402|Caenorhabditis elegans Initiation fact...   114   3e-26
AC006605-1|AAK85443.1|  430|Caenorhabditis elegans Conserved ger...    77   7e-15
AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical ...    69   2e-12
AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical ...    69   2e-12
Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical pr...    64   5e-11
Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical pr...    64   5e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    64   5e-11
AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical ...    62   3e-10
AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical ...    62   3e-10
Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical pr...    57   8e-09
EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.     55   3e-08
CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical ...    55   3e-08
U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical p...    55   3e-08
Z54327-7|CAD57690.1|  268|Caenorhabditis elegans Hypothetical pr...    54   4e-08
Z54327-6|CAA91120.1|  425|Caenorhabditis elegans Hypothetical pr...    54   4e-08
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    54   4e-08
U08102-1|AAB65852.1|  417|Caenorhabditis elegans putative RNA he...    54   4e-08
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    53   1e-07
AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical ...    50   9e-07
AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical...    50   9e-07
AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical ...    48   3e-06
Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical pr...    48   4e-06
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    44   8e-05
AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    43   1e-04
AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical ...    43   1e-04
U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical pr...    42   3e-04
U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical pr...    42   3e-04
U62772-1|AAB04136.1|  763|Caenorhabditis elegans RNA helicase pr...    41   4e-04
L19948-1|AAC27384.1|  763|Caenorhabditis elegans RNA helicase pr...    41   4e-04
AF000197-1|AAB52901.2|  763|Caenorhabditis elegans Germ-line hel...    41   4e-04
AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical ...    41   6e-04
AF025451-3|AAB71200.2|  634|Caenorhabditis elegans Hypothetical ...    40   8e-04
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    40   8e-04
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    40   8e-04
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    40   8e-04
AF079509-1|AAC28388.1|  720|Caenorhabditis elegans germline RNA ...    39   0.002
AF003145-4|AAB57719.1|  720|Caenorhabditis elegans Germ-line hel...    39   0.002
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    39   0.002
U60449-1|AAB03510.1|  974|Caenorhabditis elegans GLH-2 protein.        38   0.003
U60194-1|AAB03337.1|  974|Caenorhabditis elegans RNA helicase GL...    38   0.003
AC006625-11|AAK68269.1|  974|Caenorhabditis elegans Germ-line he...    38   0.003
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ...    38   0.005
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel...    38   0.005
L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical pr...    35   0.038
Z75546-3|CAA99891.1|  581|Caenorhabditis elegans Hypothetical pr...    34   0.067
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    33   0.088
AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical ...    32   0.20 
AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical ...    31   0.36 
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    31   0.47 
AC024830-10|AAF59610.3|  728|Caenorhabditis elegans Hypothetical...    30   1.1  
U80437-18|AAB37629.1|  518|Caenorhabditis elegans Cell division ...    29   2.5  
AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical ...    29   2.5  
U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48584-8|CAK55179.1|  435|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48584-7|CAH04712.1|  448|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48584-5|CAD57717.1|  501|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48584-4|CAD57716.1|  536|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48584-3|CAD57715.1|  524|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48584-2|CAA88477.2|  481|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z48544-1|CAA88435.1|  473|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like p...    27   5.8  
AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like ...    27   5.8  
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    27   5.8  
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    27   5.8  
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ...    27   5.8  
AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like ...    27   5.8  
AF025451-4|AAL16306.1|  567|Caenorhabditis elegans Hypothetical ...    27   7.6  

>AF039720-12|AAB96704.1|  399|Caenorhabditis elegans Hypothetical
           protein F33D11.10 protein.
          Length = 399

 Score =  137 bits (332), Expect = 4e-33
 Identities = 63/84 (75%), Positives = 76/84 (90%)
 Frame = +1

Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
           A ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59  AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118

Query: 430 DHLNAKCHACIGGTNVREDIRQLE 501
           D++N +CHACIGGTN+ EDIR+L+
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLD 142



 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +2

Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
           V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+
Sbjct: 24  VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAV 57


>AC024844-2|AAK29954.2|  399|Caenorhabditis elegans Hypothetical
           protein Y65B4A.6 protein.
          Length = 399

 Score =  137 bits (332), Expect = 4e-33
 Identities = 63/84 (75%), Positives = 76/84 (90%)
 Frame = +1

Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 429
           A ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV+ALG
Sbjct: 59  AILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALG 118

Query: 430 DHLNAKCHACIGGTNVREDIRQLE 501
           D++N +CHACIGGTN+ EDIR+L+
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLD 142



 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +2

Query: 146 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
           ++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 24  IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAI 57


>Z12116-1|CAA78102.1|  402|Caenorhabditis elegans protein (
           C.elegans mRNA for eIF-4A homologue. ).
          Length = 402

 Score =  114 bits (275), Expect = 3e-26
 Identities = 56/80 (70%), Positives = 67/80 (83%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
           G+DVIAQAQSGTGKTATFS+SILQ+ID      QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66  GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125

Query: 442 AKCHACIGGTNVREDIRQLE 501
                CIGGT+VR+D R+LE
Sbjct: 126 VNILPCIGGTSVRDDQRKLE 145



 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +2

Query: 119 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
           G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+P
Sbjct: 18  GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62


>U13876-3|AAA21170.1|  402|Caenorhabditis elegans Initiation factor
           protein 1, isoforma protein.
          Length = 402

 Score =  114 bits (275), Expect = 3e-26
 Identities = 56/80 (70%), Positives = 67/80 (83%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
           G+DVIAQAQSGTGKTATFS+SILQ+ID      QAL++APTRELAQQIQKV+ ALG++LN
Sbjct: 66  GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125

Query: 442 AKCHACIGGTNVREDIRQLE 501
                CIGGT+VR+D R+LE
Sbjct: 126 VNILPCIGGTSVRDDQRKLE 145



 Score = 75.8 bits (178), Expect = 2e-14
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +2

Query: 119 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 253
           G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+P
Sbjct: 18  GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVP 62


>AC006605-1|AAK85443.1|  430|Caenorhabditis elegans Conserved
           germline helicase protein1 protein.
          Length = 430

 Score = 77.0 bits (181), Expect = 7e-15
 Identities = 30/81 (37%), Positives = 56/81 (69%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           + G+D++A+A++GTGKT  + I ++++I  +++  QA+++ PTRELA Q  ++ + L  H
Sbjct: 78  LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137

Query: 436 LNAKCHACIGGTNVREDIRQL 498
           +  K     GGT++R+DI +L
Sbjct: 138 IQLKVMVTTGGTDLRDDIMRL 158



 Score = 33.9 bits (74), Expect = 0.067
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +2

Query: 158 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
           F+D  L  +LL GI+  G+EKPS IQ+ +I
Sbjct: 45  FEDFCLGRDLLMGIFEKGWEKPSPIQEASI 74


>AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical
           protein H20J04.4a protein.
          Length = 488

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 34/81 (41%), Positives = 49/81 (60%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           ++G D++  A++GTGKT  F+I ILQ++        ALIL PTRELA QI +   ALG  
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183

Query: 436 LNAKCHACIGGTNVREDIRQL 498
           +  KC   +GG ++    R+L
Sbjct: 184 ITLKCSVIVGGRSLIHQAREL 204


>AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical
           protein H20J04.4b protein.
          Length = 561

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 34/81 (41%), Positives = 49/81 (60%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           ++G D++  A++GTGKT  F+I ILQ++        ALIL PTRELA QI +   ALG  
Sbjct: 124 LEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKP 183

Query: 436 LNAKCHACIGGTNVREDIRQL 498
           +  KC   +GG ++    R+L
Sbjct: 184 ITLKCSVIVGGRSLIHQAREL 204


>Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical
           protein T07D4.4c protein.
          Length = 613

 Score = 64.1 bits (149), Expect = 5e-11
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
           ++IAQAQSGTGKTA F +++L +ID ++   Q + LAPT ELA+QI +VV  +G  + N 
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309

Query: 445 KCHACIGGTNV 477
           K H  I G N+
Sbjct: 310 KIHYAIKGGNM 320


>Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical
           protein T07D4.4b protein.
          Length = 638

 Score = 64.1 bits (149), Expect = 5e-11
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
           ++IAQAQSGTGKTA F +++L +ID ++   Q + LAPT ELA+QI +VV  +G  + N 
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334

Query: 445 KCHACIGGTNV 477
           K H  I G N+
Sbjct: 335 KIHYAIKGGNM 345


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 64.1 bits (149), Expect = 5e-11
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = +1

Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 444
           ++IAQAQSGTGKTA F +++L +ID ++   Q + LAPT ELA+QI +VV  +G  + N 
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718

Query: 445 KCHACIGGTNV 477
           K H  I G N+
Sbjct: 719 KIHYAIKGGNM 729


>AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5a protein.
          Length = 825

 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
           + G+DV+A +++G+GKTA F I +LQ++        +AL+++PTRELA Q  KVV  LG 
Sbjct: 59  MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118

Query: 433 HLNAKCHACIGGTNVRE 483
               +C   +GG  + E
Sbjct: 119 FTGLRCACLVGGDQIEE 135


>AC024876-3|AAU05556.1|  871|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5b protein.
          Length = 871

 Score = 61.7 bits (143), Expect = 3e-10
 Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGD 432
           + G+DV+A +++G+GKTA F I +LQ++        +AL+++PTRELA Q  KVV  LG 
Sbjct: 59  MDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGR 118

Query: 433 HLNAKCHACIGGTNVRE 483
               +C   +GG  + E
Sbjct: 119 FTGLRCACLVGGDQIEE 135


>Z29115-1|CAA82362.1|  489|Caenorhabditis elegans Hypothetical
           protein T26G10.1 protein.
          Length = 489

 Score = 56.8 bits (131), Expect = 8e-09
 Identities = 29/74 (39%), Positives = 44/74 (59%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           +QG+DVI  A++G+GKT  F+I +LQ +    +    L+L PTRELA QI +   ALG  
Sbjct: 79  LQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSG 138

Query: 436 LNAKCHACIGGTNV 477
           +       +GG ++
Sbjct: 139 IGLIAAVIVGGVDM 152


>EU051652-1|ABS85191.1|  973|Caenorhabditis elegans MEL-46 protein.
          Length = 973

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 26/70 (37%), Positives = 44/70 (62%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
           GRD++ QA+SGTGKT  FS+  ++ +D+     Q +I+ PTRE++ QI++ V  +     
Sbjct: 59  GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117

Query: 442 AKCHACIGGT 471
           A+    +GG+
Sbjct: 118 ARTSVYVGGS 127


>CU457744-1|CAM36366.2|  973|Caenorhabditis elegans Hypothetical
           protein T06A10.1 protein.
          Length = 973

 Score = 55.2 bits (127), Expect = 3e-08
 Identities = 26/70 (37%), Positives = 44/70 (62%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
           GRD++ QA+SGTGKT  FS+  ++ +D+     Q +I+ PTRE++ QI++ V  +     
Sbjct: 59  GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TG 117

Query: 442 AKCHACIGGT 471
           A+    +GG+
Sbjct: 118 ARTSVYVGGS 127


>U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical
           protein F57B9.3 protein.
          Length = 363

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 441
           G+DV  Q+Q+G+GKT    I ILQ ID      Q ++LAP R +AQ+  + + +LG +LN
Sbjct: 33  GKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLN 92

Query: 442 AKCHACIGGTNVRED 486
                C+G     E+
Sbjct: 93  VNA-TCLGFDTTAEN 106



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 25/51 (49%), Positives = 35/51 (68%)
 Frame = +2

Query: 167 MNLKEELLRGIYAYGFEKPSAIQQRAIMPSSKDAMLSLKPSQELEKLLLSL 319
           M LKEELLRGIY +GFEKPSAIQ+ A+ P +    ++++      K ++SL
Sbjct: 1   MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISL 51


>Z54327-7|CAD57690.1|  268|Caenorhabditis elegans Hypothetical
           protein C26D10.2b protein.
          Length = 268

 Score = 54.4 bits (125), Expect = 4e-08
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           I G DV+ QA+SG GKTA F I+ LQQ++    E   + +  TRELA QI K       +
Sbjct: 76  ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 135

Query: 436 L-NAKCHACIGGTNVREDIRQL 498
           L   K     GG  +++D  +L
Sbjct: 136 LPGVKVAVFFGGMAIKKDEERL 157


>Z54327-6|CAA91120.1|  425|Caenorhabditis elegans Hypothetical
           protein C26D10.2a protein.
          Length = 425

 Score = 54.4 bits (125), Expect = 4e-08
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           I G DV+ QA+SG GKTA F I+ LQQ++    E   + +  TRELA QI K       +
Sbjct: 76  ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 135

Query: 436 L-NAKCHACIGGTNVREDIRQL 498
           L   K     GG  +++D  +L
Sbjct: 136 LPGVKVAVFFGGMAIKKDEERL 157


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 54.4 bits (125), Expect = 4e-08
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 405
           +Q RDVI  A++G+GKTA F + +L  I TS+ + +          A+I+APTRELAQQI
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTRELAQQI 394

Query: 406 QKVVIALGDHLNAKCHACIGGTNVRED 486
           ++     G  L  K  + IGG + RED
Sbjct: 395 EEETNKFGKLLGIKTVSVIGGAS-RED 420


>U08102-1|AAB65852.1|  417|Caenorhabditis elegans putative RNA
           helicase protein.
          Length = 417

 Score = 54.4 bits (125), Expect = 4e-08
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 435
           I G DV+ QA+SG GKTA F I+ LQQ++    E   + +  TRELA QI K       +
Sbjct: 75  ILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKY 134

Query: 436 L-NAKCHACIGGTNVREDIRQL 498
           L   K     GG  +++D  +L
Sbjct: 135 LPGVKVAVFFGGMAIKKDEERL 156


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 420
           + GRD+I+ A++G+GKT  F +  L  I       +      L+L PTRELAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223

Query: 421 ALGDHLNAKCHACIGGTNVREDIRQLE 501
                L  K     GG +     R LE
Sbjct: 224 DFCHSLGLKMTCLFGGASKGPQARDLE 250


>AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical
           protein F53H1.1 protein.
          Length = 970

 Score = 50.0 bits (114), Expect = 9e-07
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
 Frame = +1

Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQKV 414
           + + GRDVI  A++G+GKT  F + + + I     + E     A+ILAPTRELA Q  K 
Sbjct: 337 SIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE 396

Query: 415 VIALGDHLNAKCHACIGGTNVREDIRQLE 501
                  L  K     GG  + E I  L+
Sbjct: 397 ANKFAKPLGLKVACTYGGVGISEQIADLK 425


>AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical
           protein Y71G12B.8 protein.
          Length = 763

 Score = 50.0 bits (114), Expect = 9e-07
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQIQKVVIAL 426
           + G+D+ A A +GTGKTA F + IL+++    +   C + L+L PTRELA Q+ +V   L
Sbjct: 183 LTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKL 242

Query: 427 GDHLNAKCHACIGGTNVR 480
              +  +   C GG +++
Sbjct: 243 STFIQLEVCLCAGGLDLK 260



 Score = 30.7 bits (66), Expect = 0.62
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 53  EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 226
           E  K+G SK  Q + D    +  G +LDT    V  +F+ MNL  ++L+     G+  P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172

Query: 227 AIQQRAI 247
            IQQ  I
Sbjct: 173 PIQQACI 179


>AC024753-1|AAF60456.1|  732|Caenorhabditis elegans Hypothetical
           protein Y23H5B.6 protein.
          Length = 732

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIA 423
           + G DV+  A++G+GKT    I +L+ +  +         ALI++PTRELA Q    + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170

Query: 424 LGDHLNAKCHACIGGTNV 477
           +G H    C   IGG++V
Sbjct: 171 VGAHHGFSCGLVIGGSDV 188


>Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical
           protein ZK512.2 protein.
          Length = 578

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +1

Query: 268 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 438
           DV+ ++ +G+GKT  F + +++ I  +     +  ALIL+P+REL  QI  V+    + L
Sbjct: 48  DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107

Query: 439 NAKCHACIGGTNVREDIRQLE 501
           N       GG  V ++I+  +
Sbjct: 108 NLTVETVTGGQKVDKNIKMFK 128


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 43.6 bits (98), Expect = 8e-05
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 10/64 (15%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTRELAQQI 405
           + G DV+ QA++  GKTA F + I+ +I     +T  +  Q     ALILAPTRELA QI
Sbjct: 416 LDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475

Query: 406 QKVV 417
            + +
Sbjct: 476 HEAL 479


>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIA 423
           ++G+DV+A A++G+GKT  F   +I +L +++         +I++PTREL+ Q   V+  
Sbjct: 103 LEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162

Query: 424 LGDHLNAKCHACIGGTN 474
           L +  N      +GG+N
Sbjct: 163 LLEGSNLTYGLVMGGSN 179


>AC006665-5|AAF39907.1|  630|Caenorhabditis elegans Hypothetical
           protein H27M09.1 protein.
          Length = 630

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 411
           + GRD+I  A +G+GKT TF + ++     Q++       +    LI+ P+RELA+QI  
Sbjct: 225 LSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFD 284

Query: 412 VVIALGDHL------NAKCHACIGGTNVREDIRQL 498
           ++I + D L        +   CIGG  + E  + +
Sbjct: 285 LIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDV 319


>U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical
           protein F55F8.2b protein.
          Length = 579

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
 Frame = +1

Query: 265 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 411
           +DV+  A++G+GKT  F I ++ ++            T +R  +ALI+APTREL  QI K
Sbjct: 27  QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86

Query: 412 VVIALGDHLNAKCHACIGG 468
            + AL         + +GG
Sbjct: 87  HINALISTTQLIATSIVGG 105


>U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical
           protein F55F8.2a protein.
          Length = 746

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
 Frame = +1

Query: 265 RDVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAPTRELAQQIQK 411
           +DV+  A++G+GKT  F I ++ ++            T +R  +ALI+APTREL  QI K
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253

Query: 412 VVIALGDHLNAKCHACIGG 468
            + AL         + +GG
Sbjct: 254 HINALISTTQLIATSIVGG 272


>U62772-1|AAB04136.1|  763|Caenorhabditis elegans RNA helicase
           protein.
          Length = 763

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
 Frame = +1

Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 405
           QG D++A AQ+G+GKTA F + I+ ++  D ++          + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434


>L19948-1|AAC27384.1|  763|Caenorhabditis elegans RNA helicase
           protein.
          Length = 763

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
 Frame = +1

Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 405
           QG D++A AQ+G+GKTA F + I+ ++  D ++          + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434


>AF000197-1|AAB52901.2|  763|Caenorhabditis elegans Germ-line
           helicase protein 1 protein.
          Length = 763

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
 Frame = +1

Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 405
           QG D++A AQ+G+GKTA F + I+ ++  D ++          + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434


>AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical
           protein Y54G11A.3 protein.
          Length = 504

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 402
           + G+D I  +Q+G+GKT  F +  L  ID  + + +            L+L+PTRELAQQ
Sbjct: 119 LSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ 178

Query: 403 IQ 408
           I+
Sbjct: 179 IE 180


>AF025451-3|AAB71200.2|  634|Caenorhabditis elegans Hypothetical
           protein C24H12.4a protein.
          Length = 634

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 414
           ++ ++++ +A++G+GKT  F I ++Q++       D S+    A+I+APT+EL  QI K+
Sbjct: 124 LENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKL 182

Query: 415 VIALGDHL 438
            + L   L
Sbjct: 183 FVKLSQAL 190



 Score = 30.3 bits (65), Expect = 0.82
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 116 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 247
           P   + D++   +TF D  L E +L+ I   G+EK + +Q+  I
Sbjct: 77  PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVI 120


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
           +  RD+++ AQ+G+GKTA F + I+Q I             T+ R      AL+L+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233

Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQL 498
           LA QI K         N +     GG  N R+ + +L
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRL 270


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
           +  RD+++ AQ+G+GKTA F + I+Q I             T+ R      AL+L+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217

Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQL 498
           LA QI K         N +     GG  N R+ + +L
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRL 254


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 16/97 (16%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALILAPTRE 390
           +  RD+++ AQ+G+GKTA F + I+Q I             T+ R      AL+L+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214

Query: 391 LAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQL 498
           LA QI K         N +     GG  N R+ + +L
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRL 251


>AF079509-1|AAC28388.1|  720|Caenorhabditis elegans germline RNA
           helicase-3 protein.
          Length = 720

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQI 405
           G+D++A AQ+G+GKTA F + I+ ++    D +      C  + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391


>AF003145-4|AAB57719.1|  720|Caenorhabditis elegans Germ-line
           helicase protein 3 protein.
          Length = 720

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQI 405
           G+D++A AQ+G+GKTA F + I+ ++    D +      C  + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 405
           + GRDV+  A++G+GKTA +     + I+ Q D    E   A+I+ PTRELA Q+
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQV 354


>U60449-1|AAB03510.1|  974|Caenorhabditis elegans GLH-2 protein.
          Length = 974

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
 Frame = +1

Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 405
           QG D++A AQ+G+GKTA F + I+ ++  +  +          + +IL PTREL  QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645


>U60194-1|AAB03337.1|  974|Caenorhabditis elegans RNA helicase GLH-2
           protein.
          Length = 974

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
 Frame = +1

Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 405
           QG D++A AQ+G+GKTA F + I+ ++  +  +          + +IL PTREL  QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645


>AC006625-11|AAK68269.1|  974|Caenorhabditis elegans Germ-line
           helicase protein 2 protein.
          Length = 974

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 9/58 (15%)
 Frame = +1

Query: 259 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQI 405
           QG D++A AQ+G+GKTA F + I+ ++  +  +          + +IL PTREL  QI
Sbjct: 588 QGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645


>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
            helicase-4 protein.
          Length = 1156

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
 Frame = +1

Query: 256  IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQI 405
            + G DV+A A +G+GKT  F I  + ++      D  + +     + LI+APTREL  Q 
Sbjct: 771  MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQT 830

Query: 406  QKVVIALGDHLNAKCHACIGGTNVREDIRQL 498
                  L      KC    GG +   +++ L
Sbjct: 831  FTTARQLTYETGLKCGLAFGGYSRNANVQHL 861


>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
            protein 4 protein.
          Length = 1156

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
 Frame = +1

Query: 256  IQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRELAQQI 405
            + G DV+A A +G+GKT  F I  + ++      D  + +     + LI+APTREL  Q 
Sbjct: 771  MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQT 830

Query: 406  QKVVIALGDHLNAKCHACIGGTNVREDIRQL 498
                  L      KC    GG +   +++ L
Sbjct: 831  FTTARQLTYETGLKCGLAFGGYSRNANVQHL 861


>L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical
           protein ZK686.2 protein.
          Length = 593

 Score = 34.7 bits (76), Expect = 0.038
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = +1

Query: 256 IQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQIQKVVIALGD 432
           ++ RDV   A +G+GKT  + + +L  + +   +  QA+IL P + L  QI        D
Sbjct: 154 LRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQIVDEFKRWND 213

Query: 433 HLN-AKCHACIGGTNVREDIRQL 498
               AK  +  G  +  ++ RQL
Sbjct: 214 ESGVAKVVSLSGANDFEKEARQL 236


>Z75546-3|CAA99891.1|  581|Caenorhabditis elegans Hypothetical
           protein R05D11.4 protein.
          Length = 581

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
 Frame = +1

Query: 265 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 402
           R+V+A A +G+GKT  F++ ++ +I           ++  +  A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 33.5 bits (73), Expect = 0.088
 Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 16/64 (25%)
 Frame = +1

Query: 262 GRDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALILAPTREL 393
           GRD+++ AQ+G+GKTA F +    +ILQ     +  S+     R+ Q   AL+L+PTREL
Sbjct: 203 GRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTREL 262

Query: 394 AQQI 405
           + QI
Sbjct: 263 SLQI 266


>AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical
           protein C41D11.7 protein.
          Length = 625

 Score = 32.3 bits (70), Expect = 0.20
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +1

Query: 271 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 450
           V  Q   GTGKT T ++ + + I    ++ Q ++LAPTRE    I+ +       +  K 
Sbjct: 85  VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141

Query: 451 HA-CIGGTNVREDI 489
           H   +  TN   D+
Sbjct: 142 HEHALMDTNEYRDV 155


>AC006748-6|AAF60516.1|  582|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5a protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 113 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 15
           P P +  +  D     FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
            protein Y46G5A.4 protein.
          Length = 2145

 Score = 31.1 bits (67), Expect = 0.47
 Identities = 14/51 (27%), Positives = 30/51 (58%)
 Frame = +1

Query: 253  FIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 405
            F    +VI  A +G+GKTA   +++L+  + +  E +A+ + P  ++A ++
Sbjct: 1334 FESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383


>AC024830-10|AAF59610.3|  728|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.1 protein.
          Length = 728

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 250 AFIQGRDVIAQAQSGTGKTATFSISILQ 333
           A + G D +  A++G+GKT  FS+ I Q
Sbjct: 35  AILGGADALIAAETGSGKTGAFSLPIAQ 62


>U80437-18|AAB37629.1|  518|Caenorhabditis elegans Cell division
           cycle related protein6 protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 271 VIAQAQSGTGKTATFSISILQQIDTSIREC 360
           +    Q GTGKTAT ++ +L+ +  S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226


>AC006748-5|AAX55685.1|  471|Caenorhabditis elegans Hypothetical
           protein Y39A3B.5c protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 83  DPSMAHFWNPLANLLTFFQTNKT 15
           D     FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259


>U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical
           protein F37C12.7 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +2

Query: 26  SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 166
           SER   +W +D ++GP ++ QG + +  PG D  T+D  W + VE +D+
Sbjct: 63  SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108


>Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical
           protein R09D1.2 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +3

Query: 234 SNAQ*CLHPRTRCYRSSPVRNWKNCYFLYIDSTTNRYKHS*MSSFD 371
           +N Q  + PRT  +R++ +RN +     Y+D ++  YK   M+S+D
Sbjct: 322 NNVQEAVDPRTEVFRNAEIRNNRADGVPYMDRSSADYK---MASWD 364


>Z48584-8|CAK55179.1|  435|Caenorhabditis elegans Hypothetical
           protein ZK1321.2f protein.
          Length = 435

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
           + + ++   WIAEG+ KP   M  NN + R
Sbjct: 129 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 158


>Z48584-7|CAH04712.1|  448|Caenorhabditis elegans Hypothetical
           protein ZK1321.2e protein.
          Length = 448

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
           + + ++   WIAEG+ KP   M  NN + R
Sbjct: 142 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 171


>Z48584-5|CAD57717.1|  501|Caenorhabditis elegans Hypothetical
           protein ZK1321.2d protein.
          Length = 501

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
           + + ++   WIAEG+ KP   M  NN + R
Sbjct: 195 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 224


>Z48584-4|CAD57716.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK1321.2c protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
           + + ++   WIAEG+ KP   M  NN + R
Sbjct: 230 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 259


>Z48584-3|CAD57715.1|  524|Caenorhabditis elegans Hypothetical
           protein ZK1321.2b protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
           + + ++   WIAEG+ KP   M  NN + R
Sbjct: 218 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 247


>Z48584-2|CAA88477.2|  481|Caenorhabditis elegans Hypothetical
           protein ZK1321.2a protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 261 LDEGIIARCWIAEGFSKP*AYMPLNNSSLR 172
           + + ++   WIAEG+ KP   M  NN + R
Sbjct: 175 MGDDLLEEFWIAEGYEKPKEVMMPNNKTQR 204


>Z48544-1|CAA88435.1|  473|Caenorhabditis elegans Hypothetical
           protein ZK945.1 protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 382 WEPGSKLDIHECLYRFVVESI*RK 311
           WEPG+K   H   Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233


>U61947-10|AAB03132.1|  932|Caenorhabditis elegans Kinesin-like
           protein protein 18 protein.
          Length = 932

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 325 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
           + Q +DT  +ECQ L  + + E  +   +V+    D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151


>AY211948-1|AAO34669.1|  932|Caenorhabditis elegans kinesin-like
           protein-18 protein.
          Length = 932

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 325 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
           + Q +DT  +ECQ L  + + E  +   +V+    D LNAK
Sbjct: 114 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 151


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
            protein Y105E8A.24b protein.
          Length = 1127

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +1

Query: 244  NNAFIQGRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 402
            +NA  + R  + +   G G     TAT    S+ +L++ +  IRE Q  +LA   ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071

Query: 403  IQKVVIALGDHLNAK 447
             QK + A  + +  K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
            protein Y105E8A.24a protein.
          Length = 1161

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +1

Query: 244  NNAFIQGRDVIAQAQSGTG----KTATF---SISILQQIDTSIRECQALILAPTRELAQQ 402
            +NA  + R  + +   G G     TAT    S+ +L++ +  IRE Q  +LA   ELA++
Sbjct: 1012 DNALTKSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEKEIRELQQKVLADRDELAEK 1071

Query: 403  IQKVVIALGDHLNAK 447
             QK + A  + +  K
Sbjct: 1072 -QKAIDAQEEEIQTK 1085


>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
           protein ZC123.3 protein.
          Length = 1623

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 233 QQRAIMPSSKDAMLSLKPSQELEKLLLSLYRFYNKSIQAFV 355
           ++ A   S K   L L+P+ +LEK L+  +R    +I+ F+
Sbjct: 359 EEEAGASSQKACALCLEPTDDLEKHLVEQHRIAESAIEKFL 399


>AB033538-1|BAB19356.2|  930|Caenorhabditis elegans kinesin like
           protein KLP-18 protein.
          Length = 930

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 325 ILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAK 447
           + Q +DT  +ECQ L  + + E  +   +V+    D LNAK
Sbjct: 112 VFQHLDTKAKECQKLTFSVSVEFVELYNEVIY---DLLNAK 149


>AF025451-4|AAL16306.1|  567|Caenorhabditis elegans Hypothetical
           protein C24H12.4b protein.
          Length = 567

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 364 ALILAPTRELAQQIQKVVIALGDHL 438
           A+I+APT+EL  QI K+ + L   L
Sbjct: 99  AVIIAPTKELITQIYKLFVKLSQAL 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,512,397
Number of Sequences: 27780
Number of extensions: 272631
Number of successful extensions: 901
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -