Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00274
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.49 
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    25   0.49 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   3.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 371 LYFFLCMQIFFLQVSLFILNVLFL 300
           L+F LC+  F+    +F +++LFL
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFL 163



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 377 YALYFFLCMQIFFLQVSLFILNVLFL 300
           YA    LC+  F+    +F +++LFL
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHLLFL 130



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 380 LYALYFFLCMQIFFLQVSLFILNVLFLYF*EL*HSLEFLVLC 255
           L  +Y+F C  I F    LF+L +   +   +  ++  L  C
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCC 184



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 452 SGAANYACILINCLKKLSNDKRNRLYALYFFLCMQIFFLQVSLFIL 315
           SGA+    IL + + K  N +R     +Y+F C+ I F    LF+L
Sbjct: 34  SGASLQVGILDSLVFKCYNLRR-----IYYFYCVSITFNVHLLFLL 74


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 572 DSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVEL 679
           +  +++   ++KP V YSD+  M   +  I+EA+ L
Sbjct: 24  EEQVALFGKEKKPIVSYSDLQEMKYLELVIKEALRL 59


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 374 HTVCSSCHWTVS*GS*SKYRHSWQH 448
           HT CS C  T   GS    RH   H
Sbjct: 72  HTECSKCSETQKNGSKKIMRHLIDH 96


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 431 RHSWQHHWLKLLCPYSLNN**RIVEASASVALHKHSNALVDV 556
           +H W    L LLCP S++   +  E  +   ++K++  +V V
Sbjct: 11  KHVWFLSKLFLLCPRSIDEKIKRQERHSFYKIYKYTYNIVAV 52


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 162 NNSNLFHCFYS*ENS 118
           +N N FH FYS E+S
Sbjct: 475 DNYNSFHQFYSSESS 489


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 162 NNSNLFHCFYS*ENS 118
           +N N FH FYS E+S
Sbjct: 423 DNYNSFHQFYSSESS 437


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,782
Number of Sequences: 336
Number of extensions: 3583
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)