Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00274
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 151 8e-37
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 74 1e-13
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 66 2e-11
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 42 5e-04
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 41 0.001
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 38 0.007
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 36 0.026
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 31 0.99
SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 29 3.0
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1) 29 4.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 4.0
SB_36447| Best HMM Match : Trp_repressor (HMM E-Value=2.5) 29 5.3
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 7.0
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 28 7.0
SB_29470| Best HMM Match : Glyco_transf_10 (HMM E-Value=9.1e-39) 28 9.2
SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 151 bits (365), Expect = 8e-37
Identities = 74/83 (89%), Positives = 79/83 (95%)
Frame = +3
Query: 249 FITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQN 428
+IT YKKL++ LEFLEVQEEYIKDEQ+NLKKE LHAQEEVKRIQSVPLVIGQFLEAVDQN
Sbjct: 40 YIT-YKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEAVDQN 98
Query: 429 TGIVGSTTGSNYYVRILSTIDRE 497
TGIV STTGSNYYVRILSTID+E
Sbjct: 99 TGIVASTTGSNYYVRILSTIDKE 121
Score = 134 bits (323), Expect = 9e-32
Identities = 61/78 (78%), Positives = 72/78 (92%)
Frame = +2
Query: 497 IVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVE 676
+++ SASVALHKHSNALVD+LPPEADSSI+ML +EKP+V Y++IGGMD QKQEIREAVE
Sbjct: 122 LLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVE 181
Query: 677 LPLTHVELYRQIGIEPPR 730
LPLTH ELY+QIGI+PPR
Sbjct: 182 LPLTHFELYKQIGIDPPR 199
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/78 (46%), Positives = 58/78 (74%)
Frame = +2
Query: 497 IVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVE 676
++E +V L+ +A+V VL +AD +++++ ++ P Y+DIGG+DTQ QEI+E+VE
Sbjct: 338 LLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVE 397
Query: 677 LPLTHVELYRQIGIEPPR 730
LPLTH ELY ++GI+PP+
Sbjct: 398 LPLTHPELYEEMGIKPPK 415
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +3
Query: 258 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNT 431
K KL R+ +FL ++EE+I++++R +E H +E +V ++ P+ +G E +D N
Sbjct: 256 KLLKLDRIKDFLLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNH 315
Query: 432 GIVGSTTGSNYYVRILSTIDRE 497
IV ++ GS +YV ILS +D++
Sbjct: 316 AIVSTSVGSEHYVSILSFVDKD 337
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +2
Query: 557 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
LPP+ D +++M+Q +EKPDV YSDIGG Q ++RE VE PL H E + +GIEPP+
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPK 119
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +2
Query: 518 VALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVE 697
VAL + ++ LP E D + + ++ ++ YSD+GG+ Q +E+RE +ELPLT+ E
Sbjct: 100 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPE 159
Query: 698 LYRQIGIEPPRVC 736
L++++GI PP+ C
Sbjct: 160 LFQRVGIAPPKGC 172
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/81 (24%), Positives = 45/81 (55%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNT 431
+ +YKK L+ + + ++++ ++ KEY ++ ++K +QSV ++G+ L+ + +
Sbjct: 11 LLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQLTEEK 70
Query: 432 GIVGSTTGSNYYVRILSTIDR 494
IV +T G Y V +D+
Sbjct: 71 FIVKATNGPRYVVGCRRQVDK 91
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 57.6 bits (133), Expect = 1e-08
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +2
Query: 566 EADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
E D +S++ ++ PD Y +GG+D Q +EI+E +ELP+ H EL+ +GI+ P+
Sbjct: 158 EVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPK 212
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
E P V +SD+GG + K++++EAVE PL H E ++++GI PPR
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPR 572
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 578 SISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S+ ++ K V + IGG+ TQ Q +RE +E+PLT+ EL+ G+ PPR
Sbjct: 241 SVIKKDSEAKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPR 291
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 51.2 bits (117), Expect = 9e-07
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 518 VALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEI 661
V ++K S +++ LP E DS + ++ DE+P QYSDIGG+D Q QE+
Sbjct: 119 VGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQEM 166
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 44.8 bits (101), Expect = 8e-05
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELY 703
S + A + PD+ + D+GG+D+ K+EI + ++LPL H EL+
Sbjct: 796 SHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPLLHPELF 838
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 617 QYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
++ D+GG++ KQ +R+A+E PL H E + ++G+ PR
Sbjct: 482 RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPR 519
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 536 SNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIG 715
+NA V V+ + + +I ++ D + G+D + ++E V+ PL + E + +G
Sbjct: 183 NNAYV-VITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKELVQFPLYYPESFSHLG 241
Query: 716 IEPPR 730
I P+
Sbjct: 242 INGPK 246
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 41.9 bits (94), Expect = 5e-04
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 617 QYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
++ D+GG++ KQ +R+A+E PL H E + ++G+ PR
Sbjct: 11 RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPR 48
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/43 (34%), Positives = 29/43 (67%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
E P+V + DIGG++ K+E++E V+ P+ H + + + G+ P +
Sbjct: 303 EVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSK 345
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELY 703
EKP+V++SDI G+++ K+ ++EAV LP+ L+
Sbjct: 90 EKPNVKWSDIAGLESAKEALKEAVILPIKFPHLF 123
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
+ + + D K V++ +GG++ Q Q ++E + PL + E++ + I PPR
Sbjct: 870 ADVDPMSVDRK--VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPR 919
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 258 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 392
+Y+ Q ++F +V+EE K +Q N+K A+EE +R +S +
Sbjct: 148 EYENKQLRMDFEKVEEEVEKWKQNNMKLTATRAREEQQRAKSTAM 192
>SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 608 PDVQYSDIGGMDTQKQEIREAVELPL 685
PDV++ DI G+D K+ ++EAV P+
Sbjct: 52 PDVRWDDIIGLDAAKRLVKEAVVYPI 77
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +3
Query: 270 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVG 443
+Q + E ++ E+ + + + KE+ + V+ + V+GQ +++VD+ G+VG
Sbjct: 2 VQSIDEKVQDAEQKVTKGFQEVGKEFQVVGQHVQSVDEKVGVVGQHVQSVDEKVGVVG 59
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 536 SNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIG 715
+NA V V+ + + +I ++ D + G+D + ++E V+ PL + E + +G
Sbjct: 13 NNAYV-VITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKELVQFPLYYPESFSHLG 71
Query: 716 IEPPR 730
I P+
Sbjct: 72 INGPK 76
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 264 KKLQRMLEFLEVQEEYIKDEQRNLKKEYLH--AQEEVKRIQSVPLVIGQFLEAVDQNTGI 437
KK+ +LE + + + I +E + +KK H + K++ + +E+V++N G+
Sbjct: 188 KKMAEILEEIGISPDRIHEESQQIKKPSFHDCTNKPAKKMTPRSVSSPSMMESVNEN-GL 246
Query: 438 VGST 449
GST
Sbjct: 247 PGST 250
>SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1)
Length = 235
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 315 KDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV 440
+DE+R+ KE + +V+R++S V FL QN GIV
Sbjct: 41 QDEERDSVKEKNRQRSDVERLRSTYHVSESFLAMDKQNEGIV 82
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 270 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
++ LE L+ Q IKDE NLK+ Q+E+ +++
Sbjct: 1357 IEGQLESLKAQMSKIKDENENLKESDARRQQEILDLEN 1394
>SB_36447| Best HMM Match : Trp_repressor (HMM E-Value=2.5)
Length = 228
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +2
Query: 464 LCPYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMD 643
L P+ L R ++ S +A H N + ++LPP + I ++A + +V+Y ++
Sbjct: 130 LAPHFLEFLDRRLDKSIVIAYKIHVNTVKEILPPFSQKYIDRMKA-AQGEVKYLEVAKYY 188
Query: 644 TQKQEIREAVELPL 685
+ + ++ +PL
Sbjct: 189 SSAMDTAVSIGVPL 202
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = +3
Query: 246 RFITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
R + + R L +LE + E ++ E+ LKK++ ++++E +++
Sbjct: 1870 RLQNEISAINRKLVYLETRNENLESEKDRLKKDFANSKKESAELRA 1915
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 209 NAKPFESVTWSSFSGKIIPISSIVSIAKRIRVL 111
N KP VTWS G IP +S+ RV+
Sbjct: 266 NGKPPPRVTWSKVGGASIPFVQSLSVNDNFRVV 298
>SB_29470| Best HMM Match : Glyco_transf_10 (HMM E-Value=9.1e-39)
Length = 426
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 430 VF*STASRNCPMTRGTDCMRFTSSCACKYSFFKFRCS 320
VF SR + GT C RFT C +KFR S
Sbjct: 260 VFGGCRSRFPKHSEGTSCRRFTKECDNLMRRYKFRLS 296
>SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 594 CNIEIELSASGGKTSTRALECLCRATEAEASTILYQ 487
CNI+IE GG TS+RA AT E LY+
Sbjct: 22 CNIQIEFLQPGGSTSSRA-----SATAVELQFALYE 52
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,173,266
Number of Sequences: 59808
Number of extensions: 404760
Number of successful extensions: 1227
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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