Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00274
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 131 6e-31
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 81 1e-15
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 75 7e-14
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 69 4e-12
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 63 2e-10
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 63 2e-10
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 37 0.017
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.66
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 31 0.66
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 31 0.66
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.66
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 0.66
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 31 0.66
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 31 0.66
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 31 0.66
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 31 0.87
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 31 0.87
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 2.6
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 2.6
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 2.6
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 2.6
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 2.6
Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical p... 29 3.5
Z68343-2|CAA92779.1| 213|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68343-1|CAD89741.1| 231|Caenorhabditis elegans Hypothetical pr... 29 3.5
U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical pr... 29 3.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.5
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 4.6
U58749-3|AAK18875.1| 202|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF025458-1|AAB70977.2| 384|Caenorhabditis elegans Hypothetical ... 28 8.1
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 131 bits (316), Expect = 6e-31
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +2
Query: 497 IVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVE 676
+++ SVALHK+SNALVDVLPPEADSSI ML+ DEKPD+ Y DIGG+D QKQE+REAVE
Sbjct: 119 LLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVE 178
Query: 677 LPLTHVELYRQIGIEPPR 730
LPLTH ELY+QIGI+PPR
Sbjct: 179 LPLTHGELYQQIGIDPPR 196
Score = 124 bits (298), Expect = 9e-29
Identities = 61/80 (76%), Positives = 67/80 (83%)
Frame = +3
Query: 258 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGI 437
K L+R L L+V E+YIK E RNL+KE LHAQEEVKRIQSVPLVIGQFLEAVDQN I
Sbjct: 39 KLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAI 98
Query: 438 VGSTTGSNYYVRILSTIDRE 497
VGSTTGSNYYVR+LS +DRE
Sbjct: 99 VGSTTGSNYYVRVLSILDRE 118
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/77 (44%), Positives = 54/77 (70%)
Frame = +2
Query: 500 VEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVEL 679
+E SV L+ ++A++ VL + D +S+++ ++ P Y+D+GG+D Q QEI+EAVEL
Sbjct: 147 LEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVEL 206
Query: 680 PLTHVELYRQIGIEPPR 730
PLTH E Y ++GI PP+
Sbjct: 207 PLTHPEYYEEMGIRPPK 223
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 258 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVK--RIQSVPLVIGQFLEAVDQNT 431
K K +R+ ++L +++E+I++++R +E +E K ++ P+ +G E +D
Sbjct: 64 KLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQH 123
Query: 432 GIVGSTTGSNYYVRILSTIDRE 497
IV + GS +YV I+S +D+E
Sbjct: 124 AIVSTNVGSEHYVNIMSFVDKE 145
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 74.5 bits (175), Expect = 7e-14
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +2
Query: 518 VALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVE 697
V ++K S +++ LP E DS + ++ DE+P QYSDIGG D Q QE+ EAV LP+TH +
Sbjct: 142 VGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKD 201
Query: 698 LYRQIGIEPPR 730
+ +GI PP+
Sbjct: 202 RFVNLGIHPPK 212
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +2
Query: 500 VEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVEL 679
+E V + ++ + LP + D +++M+Q +EKPDV YSD+GG Q +++RE VE
Sbjct: 136 IEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVET 195
Query: 680 PLTHVELYRQIGIEPPR 730
PL H E Y +GIEPP+
Sbjct: 196 PLLHPERYVNLGIEPPK 212
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = +2
Query: 506 ASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPL 685
A VAL + A+ +VLP + D +S++ ++ PD Y +GG+DTQ +EI+E +ELP+
Sbjct: 115 AGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPV 174
Query: 686 THVELYRQIGIEPPR 730
H EL+ +GI P+
Sbjct: 175 KHPELFDALGIAQPK 189
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = +2
Query: 506 ASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPL 685
A VAL + A+ +VLP + D +S++ ++ PD Y +GG+DTQ +EI+E +ELP+
Sbjct: 136 AGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPV 195
Query: 686 THVELYRQIGIEPPR 730
H EL+ +GI P+
Sbjct: 196 KHPELFDALGIAQPK 210
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +2
Query: 500 VEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVEL 679
+ A VAL S AL +LP + D +S++ ++ PD Y +GG+D Q +EI+E +EL
Sbjct: 118 LNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIEL 177
Query: 680 PLTHVELYRQIGIEPPR 730
P+ H EL+ +GI P+
Sbjct: 178 PVKHPELFDALGIAQPK 194
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/90 (33%), Positives = 53/90 (58%)
Frame = +2
Query: 467 CPYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDT 646
C S+N ++ V+L + ++ LP E D + + ++ ++ YSD+GG+
Sbjct: 92 CRRSINK--EELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAE 149
Query: 647 QKQEIREAVELPLTHVELYRQIGIEPPRVC 736
Q +E+RE VELPL + EL++++GI PP+ C
Sbjct: 150 QIRELREVVELPLINPELFKRVGITPPKGC 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/82 (20%), Positives = 45/82 (54%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNT 431
+ Y++ +E + + ++ ++ + K++ ++ ++K +QSV ++G+ L+ + +
Sbjct: 18 LNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEK 77
Query: 432 GIVGSTTGSNYYVRILSTIDRE 497
IV +T G Y V +I++E
Sbjct: 78 FIVKATNGPRYVVGCRRSINKE 99
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/90 (33%), Positives = 53/90 (58%)
Frame = +2
Query: 467 CPYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDT 646
C S+N ++ V+L + ++ LP E D + + ++ ++ YSD+GG+
Sbjct: 100 CRRSINK--EELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAE 157
Query: 647 QKQEIREAVELPLTHVELYRQIGIEPPRVC 736
Q +E+RE VELPL + EL++++GI PP+ C
Sbjct: 158 QIRELREVVELPLINPELFKRVGITPPKGC 187
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/82 (20%), Positives = 45/82 (54%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNT 431
+ Y++ +E + + ++ ++ + K++ ++ ++K +QSV ++G+ L+ + +
Sbjct: 26 LNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEK 85
Query: 432 GIVGSTTGSNYYVRILSTIDRE 497
IV +T G Y V +I++E
Sbjct: 86 FIVKATNGPRYVVGCRRSINKE 107
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/64 (42%), Positives = 43/64 (67%)
Frame = +2
Query: 539 NALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGI 718
+A+V VL + DS+ + ++ P + DIGG ++Q QE++E+VELPLTH E Y ++GI
Sbjct: 155 SAIVGVLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGI 214
Query: 719 EPPR 730
P+
Sbjct: 215 TAPK 218
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +2
Query: 611 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
D+ Y D+GG+ Q +I+E VELPL H +L++ IGI+PPR
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPR 245
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
E P+ +SDIGG+ K+E++E V+ P+ H E Y + G++P R
Sbjct: 476 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 518
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 611 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
+V Y D+GG+ Q +I+E VELPL H +L++ IG++PPR
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
E P+ +SDIGG+ K+E++E V+ P+ H E Y + G++P R
Sbjct: 475 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 517
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 611 DVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
+V Y D+GG+ Q +I+E VELPL H +L++ IG++PPR
Sbjct: 205 EVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPR 244
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
E P+ +SDIGG+ K+E++E V+ P+ H E Y + G++P R
Sbjct: 475 ETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSR 517
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPP 727
E P+V ++DIGG + K EI++AV P H E + + GI+PP
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPP 493
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/34 (41%), Positives = 26/34 (76%)
Frame = +2
Query: 602 EKPDVQYSDIGGMDTQKQEIREAVELPLTHVELY 703
EKP+V+++DI G++ K+ ++EAV LP+ +L+
Sbjct: 111 EKPNVKWTDIAGLEGAKEALKEAVILPIKFPQLF 144
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 375 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 424
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 375 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 424
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 575 SSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPR 730
S I + D V + +GG+ Q ++E V P+ + E++ + I PP+
Sbjct: 377 SDIDPMSVDSS--VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPK 426
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 446 HHWLKLLCPYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSIS-MLQADEKPDVQY 622
+H K ++L ++V+ V + + + + L + +S+ + + A + P+V++
Sbjct: 405 NHVAKKTSGFTLAELEKLVKNGKKVKIEEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRW 464
Query: 623 SDIGGMDTQKQEIREAVELPLTHVELYRQIGI 718
D+GG++ KQ + E++ L ++ GI
Sbjct: 465 EDVGGLEETKQTVLESIRTNLFGSRALKRSGI 496
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 446 HHWLKLLCPYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSIS-MLQADEKPDVQY 622
+H K ++L ++V+ V + + + + L + +S+ + + A + P+V++
Sbjct: 405 NHVAKKTSGFTLAELEKLVKNGKKVKIEEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRW 464
Query: 623 SDIGGMDTQKQEIREAVELPLTHVELYRQIGI 718
D+GG++ KQ + E++ L ++ GI
Sbjct: 465 EDVGGLEETKQTVLESIRTNLFGSRALKRSGI 496
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +2
Query: 446 HHWLKLLCPYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSIS-MLQADEKPDVQY 622
+H K ++L ++V+ V + + + + L + +S+ + + A + P+V++
Sbjct: 405 NHVAKKTSGFTLAELEKLVKNGKKVKIEEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRW 464
Query: 623 SDIGGMDTQKQEIREAVELPLTHVELYRQIGI 718
D+GG++ KQ + E++ L ++ GI
Sbjct: 465 EDVGGLEETKQTVLESIRTNLFGSRALKRSGI 496
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 470 PYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIG-GMDT 646
P +L I E + ++ A+VDV D S + Q E + +YS ++
Sbjct: 501 PQTLKQEYLIKEECSEISEDSEEGAIVDVASSSGDLSENRDQKSENEEFEYSPHQLTLEQ 560
Query: 647 QKQEIREAVELPLTHVELYRQIGI 718
Q I +L + H + YRQI +
Sbjct: 561 QTYLISSMAQLSIFHFQRYRQIRV 584
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 31.1 bits (67), Expect = 0.87
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 470 PYSLNN**RIVEASASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIG-GMDT 646
P +L I E + ++ A+VDV D S + Q E + +YS ++
Sbjct: 503 PQTLKQEYLIKEECSEISEDSEEGAIVDVASSSGDLSENRDQKSENEEFEYSPHQLTLEQ 562
Query: 647 QKQEIREAVELPLTHVELYRQIGI 718
Q I +L + H + YRQI +
Sbjct: 563 QTYLISSMAQLSIFHFQRYRQIRV 586
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
I K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1420 IKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
I K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1420 IKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
I K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1420 IKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
I K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1420 IKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 252 ITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 383
I K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1420 IKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical
protein T22C1.11 protein.
Length = 444
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 297 VQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 401
V+EE + E+ ++ KEY A + V +++ + LV+G
Sbjct: 216 VEEEVAQIEEEDVSKEYFDASKFVAQLEEMGLVLG 250
>Z68343-2|CAA92779.1| 213|Caenorhabditis elegans Hypothetical
protein F59B8.1b protein.
Length = 213
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/82 (20%), Positives = 40/82 (48%)
Frame = +3
Query: 246 RFITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQ 425
R + Y++L+ L+ ++QE+Y+K ++ N Y+ + V+ + + + L Q
Sbjct: 25 RILEPYRRLKNALK--KLQEDYLKSKEANALMRYVKLGQSVREVAMLEKQYWKLLNIPAQ 82
Query: 426 NTGIVGSTTGSNYYVRILSTID 491
G+ + Y V+I+ ++
Sbjct: 83 E----GTEDANCYVVKIIELLE 100
>Z68343-1|CAD89741.1| 231|Caenorhabditis elegans Hypothetical
protein F59B8.1a protein.
Length = 231
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/82 (20%), Positives = 40/82 (48%)
Frame = +3
Query: 246 RFITKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQ 425
R + Y++L+ L+ ++QE+Y+K ++ N Y+ + V+ + + + L Q
Sbjct: 43 RILEPYRRLKNALK--KLQEDYLKSKEANALMRYVKLGQSVREVAMLEKQYWKLLNIPAQ 100
Query: 426 NTGIVGSTTGSNYYVRILSTID 491
G+ + Y V+I+ ++
Sbjct: 101 E----GTEDANCYVVKIIELLE 118
>U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical
protein C04G6.11 protein.
Length = 131
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 419 NCLKKLSNDKRNRLYALYFFLCMQIFFLQVSLFILNVLFL 300
+CLKK S + + FF C+ FFL S+F L + +L
Sbjct: 89 DCLKK-SRRRLLSIKFFVFFFCLLPFFLSSSIFFLYLFYL 127
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 276 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 380
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 276 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 380
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 276 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 380
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 582 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 615
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 276 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 380
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 385 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 281
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 385 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 281
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>U58749-3|AAK18875.1| 202|Caenorhabditis elegans Hypothetical
protein B0496.4 protein.
Length = 202
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 558 KTSTRALECLCRATEAEASTILYQLLREYGHNNLS 454
+ S+RA E L R T E S + L++ YG+NN S
Sbjct: 135 RESSRAQELLAR-TNREMSPTIDSLMKRYGNNNSS 168
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +3
Query: 264 KKLQRMLEFLEVQEEYIKDEQR---NLKKEYLHAQEEVKRIQS 383
KKLQ + + +EVQ+E IK+ + NL+K + E+K +S
Sbjct: 324 KKLQELRDEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSES 366
>AF025458-1|AAB70977.2| 384|Caenorhabditis elegans Hypothetical
protein C01B12.4 protein.
Length = 384
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -3
Query: 413 LKKLSNDK-RNRLYALYFFLCMQIFFLQVSLFILN-VLFLY 297
LK +SN++ RN +YAL F + F V +FI +FLY
Sbjct: 59 LKYVSNERIRNDMYALIFMFPITTFASLVGMFIPRAAIFLY 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,998,704
Number of Sequences: 27780
Number of extensions: 320611
Number of successful extensions: 1059
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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