Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00273
(574 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 168 9e-41
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 152 5e-36
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 146 2e-34
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 141 9e-33
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 136 5e-31
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 127 2e-28
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 126 3e-28
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 120 3e-26
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 111 1e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 1e-22
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 107 2e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 106 4e-22
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 105 6e-22
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 102 5e-21
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 98 1e-19
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 97 3e-19
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 88 1e-16
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 87 4e-16
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 86 6e-16
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 85 8e-16
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 85 8e-16
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 84 3e-15
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 83 3e-15
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 83 4e-15
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 82 1e-14
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 79 7e-14
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 78 1e-13
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 76 5e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 74 2e-12
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 72 1e-11
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 71 1e-11
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 69 1e-10
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 68 1e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 66 4e-10
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 66 4e-10
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 63 4e-09
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 59 8e-08
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 52 1e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 52 1e-05
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 52 1e-05
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 50 5e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 49 7e-05
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 48 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 47 3e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 46 6e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 45 0.001
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 44 0.002
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.002
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 44 0.003
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.003
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 42 0.008
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 42 0.008
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 42 0.014
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 40 0.041
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 40 0.041
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 40 0.041
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 40 0.055
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 40 0.055
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 39 0.072
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 39 0.096
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.096
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 39 0.096
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 38 0.13
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 38 0.17
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 38 0.22
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 38 0.22
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.29
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 37 0.29
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 37 0.29
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 37 0.39
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.39
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 36 0.51
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 36 0.68
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 36 0.89
UniRef50_UPI0000D998E5 Cluster: PREDICTED: similar to 40S riboso... 35 1.2
UniRef50_Q6TEI0 Cluster: Type I polyketide synthase; n=1; Strept... 35 1.6
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 1.6
UniRef50_A3M596 Cluster: Cobalamin-5-phosphate synthase CobS; n=... 34 2.7
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 33 3.6
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 33 4.8
UniRef50_Q8YTV3 Cluster: Ferrichrome-iron receptor; n=7; Cyanoba... 33 6.3
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 33 6.3
UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel... 32 8.3
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 168 bits (408), Expect = 9e-41
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 157 LAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMM 216
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG+ DCYTSARG T TLGNFAKAT
Sbjct: 217 AGIDDCYTSARGCTATLGNFAKAT 240
Score = 145 bits (352), Expect = 6e-34
Identities = 72/84 (85%), Positives = 73/84 (86%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 189 NGHIGLGXKCRXEVATAIRGAISL 260
NGH+GLG KC EVATAIRGAI L
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIIL 157
Score = 37.5 bits (83), Expect = 0.22
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPLT 573
LG F + AI+KTY+YLTPDLW++ T
Sbjct: 233 LGNFAKATFDAISKTYSYLTPDLWKETVFT 262
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 152 bits (369), Expect = 5e-36
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLS++P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL M
Sbjct: 101 LAKLSIVPLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMM 160
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG+ DCYTSAR T +LGNFAKAT
Sbjct: 161 AGIDDCYTSARDCTASLGNFAKAT 184
Score = 90.2 bits (214), Expect = 3e-17
Identities = 45/54 (83%), Positives = 45/54 (83%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAISL 260
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLG KC EVATAIR AI L
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIIL 101
Score = 35.5 bits (78), Expect = 0.89
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPLT 573
LG F + I+KTY YLTPDLW++ T
Sbjct: 177 LGNFAKATFDTISKTYTYLTPDLWKETVFT 206
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 146 bits (355), Expect = 2e-34
Identities = 69/100 (69%), Positives = 76/100 (76%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLS+LPV RGYWGN+I KPHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL M
Sbjct: 97 LAKLSILPVPRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMM 156
Query: 437 AGVQDCYTSARGSTGTLGNFAKATMLPLPRHMPTSLLTCG 556
AG+ DCYTSARG T T G + ++ PR S L G
Sbjct: 157 AGIDDCYTSARGHTATWGTLPRLLLMRSPRPTAISPLISG 196
Score = 56.0 bits (129), Expect = 6e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 150 RTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAISL 260
+ RFKAFVAIGD+NG +G G KC E ATAIRGA+ L
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVIL 97
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 141 bits (342), Expect = 9e-33
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+
Sbjct: 130 MGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQL 189
Query: 437 AGVQDCYTSARGSTGTLGNFAKA 505
AG++DCYT +RGST TLGNF KA
Sbjct: 190 AGIEDCYTQSRGSTKTLGNFVKA 212
Score = 136 bits (328), Expect = 5e-31
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD
Sbjct: 47 GKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGD 105
Query: 186 NNGHIGLGXKCRXEVATAIRGAI 254
++GH+GLG KC EVATAIRGAI
Sbjct: 106 SDGHVGLGIKCAKEVATAIRGAI 128
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 136 bits (328), Expect = 5e-31
Identities = 68/84 (80%), Positives = 69/84 (82%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 189 NGHIGLGXKCRXEVATAIRGAISL 260
NGH+GL KC EVATAIRGAI L
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIIL 97
Score = 85.4 bits (202), Expect = 8e-16
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 385
LAKLS++PV RGYWGNKIGKPHTVPCKVTG+C SV V LIPAP
Sbjct: 97 LAKLSIVPVCRGYWGNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 127 bits (307), Expect = 2e-28
Identities = 57/84 (67%), Positives = 69/84 (82%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKL+++PVRRGYWG+K+G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L M
Sbjct: 147 LAKLNIVPVRRGYWGSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAM 206
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG+ D YT +RG T TLGN KAT
Sbjct: 207 AGLHDVYTCSRGHTRTLGNSVKAT 230
Score = 116 bits (278), Expect = 5e-25
Identities = 55/86 (63%), Positives = 67/86 (77%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
+GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +G
Sbjct: 62 QGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVG 121
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
D NGHIGLG K EVA +I+G++ L
Sbjct: 122 DCNGHIGLGVKACKEVAHSIQGSMIL 147
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 126 bits (305), Expect = 3e-28
Identities = 55/88 (62%), Positives = 70/88 (79%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
+AKLSV+P+RRGYWG +G+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+
Sbjct: 131 IAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQL 190
Query: 437 AGVQDCYTSARGSTGTLGNFAKATMLPL 520
AGV+D YT + G T TL N KA + +
Sbjct: 191 AGVEDVYTQSNGKTRTLENTLKAAFVAI 218
Score = 112 bits (270), Expect = 5e-24
Identities = 55/83 (66%), Positives = 63/83 (75%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD
Sbjct: 48 GKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGD 106
Query: 186 NNGHIGLGXKCRXEVATAIRGAI 254
+NGH+GLG K EVA AIR I
Sbjct: 107 SNGHVGLGIKTAKEVAGAIRAGI 129
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 120 bits (288), Expect = 3e-26
Identities = 58/66 (87%), Positives = 59/66 (89%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 189 NGHIGL 206
NGH+GL
Sbjct: 109 NGHVGL 114
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 111 bits (266), Expect = 1e-23
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = +2
Query: 335 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 508
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKAT 182
Score = 93.9 bits (223), Expect = 2e-18
Identities = 46/52 (88%), Positives = 46/52 (88%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 164
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 37.5 bits (83), Expect = 0.22
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPLT 573
LG F + AI+KTY+YLTPDLW++ T
Sbjct: 175 LGNFAKATFDAISKTYSYLTPDLWKETVFT 204
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 1e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 189 NGHIG 203
NG+ G
Sbjct: 62 NGYAG 66
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +1
Query: 283 SKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLHL 462
++RLLG QDR+A HRPLQG R + C +W+ + + + EA+ D W LLHL
Sbjct: 93 AQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHL 152
Query: 463 SSWFNWHLGK 492
S + H G+
Sbjct: 153 SQGLHCHPGQ 162
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 107 bits (256), Expect = 2e-22
Identities = 55/97 (56%), Positives = 67/97 (69%)
Frame = +2
Query: 215 VQXGSRHCHSRRYFLAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGT 394
V G ++ LAKLS++PV G ++ +PH VPC+VTG+CGS+ V LIPAPRGT
Sbjct: 120 VSLGIKYSMEVAIILAKLSIIPVETATGGKRL-EPHMVPCRVTGRCGSLLVHLIPAPRGT 178
Query: 395 GIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 505
G VSAPVP KLL MAG+ D +SA G T TLGNF KA
Sbjct: 179 GTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNFTKA 213
Score = 44.0 bits (99), Expect = 0.003
Identities = 39/106 (36%), Positives = 46/106 (43%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
E KI LE IY FSL + + F P+ KQT Q+TRFKA V +G
Sbjct: 66 EMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQTCTDQQTRFKASVTVG 115
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISLLSCLFYQFEEVTGVTRSESH 320
+ GH+ LG K EV AI L E TG R E H
Sbjct: 116 -SYGHVSLGIKYSMEV------AIILAKLSIIPVETATGGKRLEPH 154
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 106 bits (254), Expect = 4e-22
Identities = 47/87 (54%), Positives = 63/87 (72%)
Frame = +2
Query: 260 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 439
AK ++ PVR G W GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++A
Sbjct: 119 AKCAIRPVRLGLWDGAQGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELA 178
Query: 440 GVQDCYTSARGSTGTLGNFAKATMLPL 520
G++D YT + G+T T NFAKA++ L
Sbjct: 179 GIKDLYTLSFGATSTTENFAKASIAAL 205
Score = 99 bits (238), Expect = 4e-20
Identities = 48/87 (55%), Positives = 59/87 (67%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI LE I+ FS I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD
Sbjct: 35 KITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDR 94
Query: 189 NGHIGLGXKCRXEVATAIRGAISLLSC 269
GH+G+G K E A+AIRGAI+ C
Sbjct: 95 KGHVGIGTKASKEAASAIRGAIARAKC 121
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 105 bits (253), Expect = 6e-22
Identities = 51/70 (72%), Positives = 54/70 (77%)
Frame = +2
Query: 299 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 478
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 479 GTLGNFAKAT 508
+L FA+AT
Sbjct: 67 ASLDYFAQAT 76
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 102 bits (245), Expect = 5e-21
Identities = 50/76 (65%), Positives = 58/76 (76%)
Frame = +2
Query: 245 RRYFLAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKK 424
R L KL ++PV RGY G+K KPHTV CKVTG GSV++ LIPAPR T I SAP+PKK
Sbjct: 132 RVIILTKLPIVPVWRGYCGSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKK 190
Query: 425 LLQMAGVQDCYTSARG 472
LL MAG+ DC+TSARG
Sbjct: 191 LLMMAGINDCHTSARG 206
Score = 72.5 bits (170), Expect = 6e-12
Identities = 46/84 (54%), Positives = 52/84 (61%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
+I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD
Sbjct: 62 EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDY 115
Query: 189 NGHIGLGXKCRXEVATAIRGAISL 260
NGH+ G EVA I+ I L
Sbjct: 116 NGHVITGL---DEVANTIQRVIIL 136
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 98.3 bits (234), Expect = 1e-19
Identities = 49/88 (55%), Positives = 64/88 (72%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD
Sbjct: 77 GKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGD 135
Query: 186 NNGHIGLGXKCRXEVATAIRGAISLLSC 269
++ HIGLG K EV AI+ +L C
Sbjct: 136 SHQHIGLGWKSAKEVQGAIQELCNLNQC 163
Score = 43.6 bits (98), Expect = 0.003
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +1
Query: 277 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLL 456
+S KR+LG QDR TH P+Q R+ S S YW E ++GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 457 H 459
H
Sbjct: 229 H 229
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/58 (81%), Positives = 49/58 (84%)
Frame = +2
Query: 335 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 508
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNFAKAT
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKAT 181
Score = 83.8 bits (198), Expect = 3e-15
Identities = 42/52 (80%), Positives = 43/52 (82%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 164
KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 35.1 bits (77), Expect = 1.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPLT 573
LG F + AI+K Y+YLTPDLW++ T
Sbjct: 174 LGNFAKATFDAISKIYSYLTPDLWKETVFT 203
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 88.2 bits (209), Expect = 1e-16
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
AK++++PVRRG W G+PH++P KV GK GSV V L+PAP+GTG+V V K LL
Sbjct: 110 AKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLT 169
Query: 434 MAGVQDCYTSARGSTGTLGNFAKA 505
AG++D +++ +G T T NF +A
Sbjct: 170 YAGIKDAWSTTKGETRTTENFVRA 193
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G
Sbjct: 25 EGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMG 83
Query: 183 DNNGHIGLGXKCRXEVATAIRGAI 254
+ +G++ +G ++ AI+ AI
Sbjct: 84 NMDGYVSIGTGKAKQLRVAIQKAI 107
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 86.6 bits (205), Expect = 4e-16
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +2
Query: 377 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 508
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKAT 44
Score = 37.5 bits (83), Expect = 0.22
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPLT 573
LG F + AI+KTY+YLTPDLW++ T
Sbjct: 37 LGNFAKATFDAISKTYSYLTPDLWKETVFT 66
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 85.8 bits (203), Expect = 6e-16
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
AKL+++ ++RG W + +PH+VP V GK GSV VRLIP PRG G+V V KK+L+
Sbjct: 117 AKLNIIEIKRGCGSWECRCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILR 176
Query: 434 MAGVQDCYTSARGSTGTLGNFAKA 505
+AGVQD ++ G T T NFAKA
Sbjct: 177 LAGVQDVWSQTFGETRTTVNFAKA 200
Score = 58.8 bits (136), Expect = 8e-08
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAF 170
EG+I + I+ IKE EIID L P +N EVL I + T +G+R RF+
Sbjct: 28 EGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVL 86
Query: 171 VAIGDNNGHIGLGXKCRXEVATAIRGAIS 257
A+G+ +G++GLG EV AIR AI+
Sbjct: 87 AAVGNRDGYVGLGIGHGKEVGIAIRKAIN 115
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 85.4 bits (202), Expect = 8e-16
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = +2
Query: 290 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 469
G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + AR
Sbjct: 68 GWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLAR 127
Query: 470 GSTGTLGNFAKAT 508
G T L N KAT
Sbjct: 128 GCTAILDNVIKAT 140
Score = 54.4 bits (125), Expect = 2e-06
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +3
Query: 72 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 252 ISL 260
I L
Sbjct: 55 IIL 57
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 85.4 bits (202), Expect = 8e-16
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = +2
Query: 260 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 439
AKL++ +RRGYW + GKP+T+ K +GK GSV V + PAP+GTGIV++ +L+++
Sbjct: 164 AKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKIS 223
Query: 440 GVQDCYTSARGSTGTLGNFAKAT 508
G++DC+T + G T + N KAT
Sbjct: 224 GIRDCFTKSFGRTKSSFNTIKAT 246
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/78 (26%), Positives = 45/78 (57%)
Frame = +3
Query: 21 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 200
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 201 GLGXKCRXEVATAIRGAI 254
GLG K + I+ A+
Sbjct: 144 GLGVKSSMDSKAGIKAAL 161
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 83.8 bits (198), Expect = 3e-15
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 LAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 430
+AKL+++ V RG W G+PHTV + GK GSV V L PAPRG G+ +K+L
Sbjct: 103 IAKLNIIDVSRGCGSWECGCGRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVL 162
Query: 431 QMAGVQDCYTSARGSTGTLGNFAKAT 508
++AG++D +T + G+T T NFAKAT
Sbjct: 163 ELAGIEDIWTRSSGNTRTTVNFAKAT 188
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G
Sbjct: 19 EGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVG 77
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
+ +G IG +V AI+ AI +
Sbjct: 78 NRDGLIGYAEGRDDQVGGAIQKAIDI 103
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 83.4 bits (197), Expect = 3e-15
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
AKLS++ VR G W G PH++P G CGSV V L+PAPRG G+V+ V K +L
Sbjct: 113 AKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLG 172
Query: 434 MAGVQDCYTSARGSTGTLGNFAKAT 508
+AGV+D +T G T T NFA+AT
Sbjct: 173 LAGVKDAWTKTFGDTRTTYNFAEAT 197
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EG I + I LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G
Sbjct: 28 EGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVG 86
Query: 183 DNNGHIGLGXKCRXEVATAIRGAIS 257
+ NG++G+G EV AIR AI+
Sbjct: 87 NKNGYVGVGMGKSKEVGPAIRKAIA 111
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 83.0 bits (196), Expect = 4e-15
Identities = 41/62 (66%), Positives = 46/62 (74%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL NF K
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 503 AT 508
AT
Sbjct: 220 AT 221
Score = 54.0 bits (124), Expect = 2e-06
Identities = 35/68 (51%), Positives = 40/68 (58%)
Frame = +3
Query: 39 FSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKC 218
FSL K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KC
Sbjct: 83 FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKC 138
Query: 219 RXEVATAI 242
+ ATAI
Sbjct: 139 SKKTATAI 146
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +3
Query: 30 IYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG 209
+YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LG
Sbjct: 142 VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLG 201
Query: 210 XKCRXEVATAI 242
+ E+ A+
Sbjct: 202 VEWPKELLIAV 212
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
A L+V P++ G W + + H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL+
Sbjct: 143 AYLNVNPIKMGCGSWECRCDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLE 202
Query: 434 MAGVQDCYTSARGSTGTLGNFAKATM 511
+AG++D +T+A+GST T+ + +KA +
Sbjct: 203 LAGLKDAWTTAKGSTPTMNSTSKAIL 228
Score = 60.1 bits (139), Expect = 4e-08
Identities = 35/82 (42%), Positives = 46/82 (56%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
G+I LE I L I+E II L P L EV+ + +QK T GQ TRFKA VA G+
Sbjct: 59 GEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGN 117
Query: 186 NNGHIGLGXKCRXEVATAIRGA 251
NG++G+G ++ AI A
Sbjct: 118 ENGYLGIGQGKSKQMRIAIEKA 139
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 79.0 bits (186), Expect = 7e-14
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
AKL+++ ++RG W GKPHT+P V GK GSV+V L PAP+G G+ V K +L+
Sbjct: 102 AKLNIIEIKRGCGSWECGCGKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILR 161
Query: 434 MAGVQDCYTSARGSTGTLGNFAKAT 508
MAG+ D + A G T T N+A AT
Sbjct: 162 MAGIDDAWGFAAGHTKTTVNYALAT 186
Score = 62.5 bits (145), Expect = 7e-09
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
G+I + LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+
Sbjct: 18 GEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGN 76
Query: 186 NNGHIGLGXKCRXEVATAIRGAI 254
NG++G+G E A AI+ AI
Sbjct: 77 GNGYVGVGRGKAKEAAPAIKKAI 99
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 78.2 bits (184), Expect = 1e-13
Identities = 37/86 (43%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
A L+V P++ G W + + H+VP KV GK GSV + ++PAPRG G+V+ ++LL+
Sbjct: 124 ALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLE 183
Query: 434 MAGVQDCYTSARGSTGTLGNFAKATM 511
+AG++D YT+A+GST T + +KA +
Sbjct: 184 LAGLKDAYTTAKGSTPTTNSTSKAVL 209
Score = 56.4 bits (130), Expect = 4e-07
Identities = 34/82 (41%), Positives = 45/82 (54%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
G+I LE I I+E II L P L EV+ + +QK T GQ TRFKA VA G+
Sbjct: 40 GEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGN 98
Query: 186 NNGHIGLGXKCRXEVATAIRGA 251
NG++G+G ++ AI A
Sbjct: 99 ENGYLGIGQGKAKQMRIAIEKA 120
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 76.2 bits (179), Expect = 5e-13
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = +2
Query: 305 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 484
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 485 LGNFAKATM 511
L NF+K T+
Sbjct: 112 LYNFSKPTI 120
Score = 59.3 bits (137), Expect = 6e-08
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 126 QKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRG 248
QKQT+ GQ+ R K F GD NGH+GLG KC EVATA +G
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQG 41
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 74.1 bits (174), Expect = 2e-12
Identities = 36/86 (41%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 LAKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 430
+AKL+++ V RG W ++ G +++ K GK GSVTV + PAP+G G+ +A + +L
Sbjct: 154 VAKLNIIEVDRGSGSWEDQPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNIL 213
Query: 431 QMAGVQDCYTSARGSTGTLGNFAKAT 508
++AGV+D +T++ G+T T N AKAT
Sbjct: 214 ELAGVEDAWTNSDGNTRTTVNLAKAT 239
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +3
Query: 6 GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
G I +E LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+
Sbjct: 71 GDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGN 129
Query: 186 NNGHIGLGXKCRXEVATAIRGAISLLSCLFYQFEEVTGVTRSE-SHTPSLAR 338
+G++G +V AI+ AI + + + +G + T SL R
Sbjct: 130 RDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTR 181
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/83 (49%), Positives = 51/83 (61%)
Frame = -2
Query: 513 SIVALAKFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTL 334
S + LAK PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL
Sbjct: 6 SSIVLAKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITL 65
Query: 333 QGTVCGFPILLPQ*PLRTGKTDN 265
G +CG LLP P+ + DN
Sbjct: 66 CG-LCGACCLLP--PVASTHRDN 85
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = -3
Query: 260 QGNSASNGSGDFLSALXTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAE 81
Q +S ++G G FL+AL QT++ V V +G++ LE L+GT L L HDL + ++Q A+
Sbjct: 45 QDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQ 104
Query: 80 EEINDLEFFDW*RKQVNALEFVDFS 6
EEI+DLE F+ R QV+ L+ D +
Sbjct: 105 EEIDDLELFNGQRVQVDLLQGADLA 129
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
AKL+++PV RG W + G +VP K+TG+ GS V L+PAP G G+V + +++L
Sbjct: 89 AKLNMIPVMRGNGSWESGGGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLT 148
Query: 434 MAGVQDCYTSARGSTGTLGNFAKAT 508
+AGV D ++ + G T T N+A+AT
Sbjct: 149 LAGVTDVWSRSAGQTRTTINYAQAT 173
Score = 66.9 bits (156), Expect = 3e-10
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
+GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G
Sbjct: 4 DGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVG 62
Query: 183 DNNGHIGLGXKCRXEVATAIRGAI 254
+++G++GL EVA+ IR AI
Sbjct: 63 NSDGYVGLAICKGKEVASTIRKAI 86
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +2
Query: 260 AKLSVLPVRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 433
AKL+++ V RG W G PH++P +V GK GSV V L PAP+G GIV+ KK+ +
Sbjct: 117 AKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFR 176
Query: 434 MAGVQDCYTSARGSTGTLGN 493
+AG++D + + G T T N
Sbjct: 177 LAGIKDVWVRSFGKTKTKMN 196
Score = 43.6 bits (98), Expect = 0.003
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLK-------------IMPVQKQTRA 143
EGKI ++ I I+E EI+D L P+L E +K QK+T
Sbjct: 19 EGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAE 77
Query: 144 GQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAIS 257
G +TR++ +GD +GH+G+G ++ A AI+
Sbjct: 78 GNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAIN 115
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 68.1 bits (159), Expect = 1e-10
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 189 NGHIGLGXKCRXEVATAIRGAISLLSC 269
N ++ LG + E+ A+ I +L C
Sbjct: 61 NDNVSLGVERPKELLIAVCRTI-ILPC 86
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +3
Query: 21 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 200
++ I + LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH
Sbjct: 10 VKDIKIKYLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHN 67
Query: 201 GLGXKCRXEVATAI 242
G+G KC +V TA+
Sbjct: 68 GIGVKCSKKVGTAV 81
Score = 61.7 bits (143), Expect = 1e-08
Identities = 42/80 (52%), Positives = 47/80 (58%)
Frame = +2
Query: 269 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 448
S LP R Y GN I KP T PCK TG S++ L P IVS VP+KL+ A +
Sbjct: 92 SCLP--RDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 449 DCYTSARGSTGTLGNFAKAT 508
CYTSAR T TLGN AKAT
Sbjct: 145 SCYTSARSYTVTLGNIAKAT 164
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 66.5 bits (155), Expect = 4e-10
Identities = 32/68 (47%), Positives = 45/68 (66%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
+GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+ R KA VAIG
Sbjct: 46 DGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIG 104
Query: 183 DNNGHIGL 206
D+NGH L
Sbjct: 105 DHNGHRAL 112
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 63.3 bits (147), Expect = 4e-09
Identities = 32/53 (60%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +2
Query: 290 GYWGNKIGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 445
GY GNKIG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 120 GYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
Score = 50.4 bits (115), Expect = 3e-05
Identities = 36/87 (41%), Positives = 47/87 (54%)
Frame = +3
Query: 15 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNG 194
+K++S+ S P +II+FFLG L DEVL+ M Q QRTR K F + +
Sbjct: 36 EKIKSLESCS-PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSP 89
Query: 195 HIGLGXKCRXEVATAIRGAISLLSCLF 275
L C EV TA + AI+LLS LF
Sbjct: 90 MTTL-VNCSKEVGTAAQRAITLLSFLF 115
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 58.8 bits (136), Expect = 8e-08
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = -3
Query: 254 NSASNGSGDFLSALXTQTNMTVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEE 75
++ S+G+ +FLS L TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++
Sbjct: 128 DTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQL 186
Query: 74 INDLEFFDW*RKQ 36
+NDLEF DW R Q
Sbjct: 187 VNDLEFLDWQRVQ 199
Score = 54.8 bits (126), Expect = 1e-06
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = -1
Query: 505 GFSKISQGAS*TTS*GVAVLYTSHLKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARD 326
G + Q + T+ GV + TS L +LL +W ++ T+ NQ + TTL L
Sbjct: 44 GLQSVFQSSGGTSRRGVDIFNTSQLHQLLDSWGGDDTGTSWSWNQSNGNGTTLTRGLGSQ 103
Query: 325 GVWLSDLVTPVTSSNW*NRQLSKE 254
GV L+ + TPVTSS+W N QL +
Sbjct: 104 GVRLTQVGTPVTSSDWDNGQLGDD 127
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2
Query: 389 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATM 511
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF K M
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVKHQM 42
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/66 (34%), Positives = 41/66 (62%)
Frame = +2
Query: 314 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 493
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS N
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGSRNK-HN 133
Query: 494 FAKATM 511
A+AT+
Sbjct: 134 VARATV 139
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAIS 257
+++LKI V K T+ G+ F A+GD G IGLG V AIR AI+
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIA 63
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 314 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 493
K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+ + N
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSSNPV-N 154
Query: 494 FAKATM 511
KAT+
Sbjct: 155 IVKATL 160
Score = 40.3 bits (90), Expect = 0.031
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 96 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
+++V+KI V K + G+R F A +GD G +G+G EV AIR +I
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSI 83
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3
Query: 84 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
GP ++VL++ + K + G+ F+A VA+GD NG IGLG EV A+ A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKA 123
Score = 39.5 bits (88), Expect = 0.055
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +2
Query: 308 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 487
I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L
Sbjct: 136 ITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNAL 195
Query: 488 GNFAKATM 511
N AKA +
Sbjct: 196 NN-AKAVL 202
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +2
Query: 338 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATM 511
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+ + N +AT+
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM-NVIRATI 180
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +3
Query: 90 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
+ + V+KI + K T+ G+ RF A V IGD NG +G G EV AI+ AI
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAI 102
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
L + V+ + V K + G+R RF A V +GD NGH+G G EV AI+ A+
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAV 65
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS + N +
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPI-NMIR 139
Query: 503 ATM 511
AT+
Sbjct: 140 ATL 142
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L N A
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL-NLAL 142
Query: 503 ATM 511
ATM
Sbjct: 143 ATM 145
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAIS 257
+++++I K T+ G+ F+ +G+ NG +GLG EV AIR AIS
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAIS 69
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 46.0 bits (104), Expect = 6e-04
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 305 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 484
K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTS 201
Query: 485 LGNFAKATM 511
L N +AT+
Sbjct: 202 L-NMVRATI 209
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
L ++++ + + K T+ G+ RF A IGD G++G G EV AIR A+
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKAL 131
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 269 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 448
S + RR + K T P + G G+ V L PA GTG+++ + +L+MAGV+
Sbjct: 199 SAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 258
Query: 449 DCYTSARGSTGTLGNFAKATM 511
+ GS L N A+AT+
Sbjct: 259 NALGKQLGSNNALNN-ARATL 278
Score = 39.9 bits (89), Expect = 0.041
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIR 245
+ V+++ V K + G++ +F+A V +GD G++G+G EV A++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQ 197
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++ N AK
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGASNA-ANVAK 142
Query: 503 AT 508
AT
Sbjct: 143 AT 144
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 96 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIR 245
++ V+ I K + G+ F A V +GD G +G G EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 478
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 36.3 bits (80), Expect = 0.51
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
L + ++ + T+ G+R F V +GD GH+G G EV AI I
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGI 81
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +2
Query: 335 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATM 511
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G + N ATM
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLGRNTPI-NMIHATM 196
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 78 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
F ++V+ I V K T+ G+ RF A V +GD G +GLG EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAV 96
Score = 41.9 bits (94), Expect = 0.010
Identities = 20/63 (31%), Positives = 36/63 (57%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G + N +
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLGRNNPI-NMIR 170
Query: 503 ATM 511
AT+
Sbjct: 171 ATI 173
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +2
Query: 263 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 442
K V R+ + K +++P ++G G+ V L PA GTG+++ + +L++AG
Sbjct: 116 KKGVSDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAG 175
Query: 443 VQDCYTSARGSTGTLGNFAKATMLPLPR 526
+++ + GS L N A+A L R
Sbjct: 176 IKNVLAKSLGSKSPLNN-ARAAADALSR 202
Score = 40.3 bits (90), Expect = 0.031
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAIS 257
+ V++I V K + G++ F+A + +GD NG +G+G +V A++ +S
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVS 120
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 72 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 252 I 254
+
Sbjct: 566 L 566
Score = 37.5 bits (83), Expect = 0.22
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 493
T+P +V K + ++PA GTG+++ + +L++AGVQ+ G L N
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 42.3 bits (95), Expect = 0.008
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
+ ++KI V K T+ G++ F+A V IGD NG +G+G +V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 35.9 bits (79), Expect = 0.68
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 308 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 487
I K ++P V G G+ + + P+ G+G+++ + +L++AG+++ GS L
Sbjct: 91 ITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLGSDNLL 150
Query: 488 GN 493
N
Sbjct: 151 NN 152
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 41.5 bits (93), Expect = 0.014
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+ + K
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGTNNPV-TLVK 148
Query: 503 ATM 511
AT+
Sbjct: 149 ATL 151
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 39.9 bits (89), Expect = 0.041
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +2
Query: 386 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 508
RG + + + KKLL +A +QDCY AR + LGN+AKAT
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKAT 45
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 39.9 bits (89), Expect = 0.041
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T P + G G+ V L PA GTG+++ + +L+MAGV++ S L N A+
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNN-AR 312
Query: 503 ATMLPLPR 526
AT++ + +
Sbjct: 313 ATVVAVQK 320
Score = 37.5 bits (83), Expect = 0.22
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIR 245
+ V+++ V K + G++ F+A V +GD G +G+G EV A++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQ 234
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 39.9 bits (89), Expect = 0.041
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +3
Query: 84 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAI 242
G L D V+ I V K + G+ F A V +GD NG +G+G EV AI
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAI 94
Score = 37.5 bits (83), Expect = 0.22
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS T N +
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS-ATAVNVVR 172
Query: 503 ATM 511
AT+
Sbjct: 173 ATV 175
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 39.5 bits (88), Expect = 0.055
Identities = 27/87 (31%), Positives = 40/87 (45%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAISLLSCLFY 278
+ V+ I V K + G+R F A V +GD NG +G+G EV AI + F+
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 279 QFEEVTGVTRSESHTPSLARSPASVVL 359
+ + G +H P + A VVL
Sbjct: 104 RVPLIGGTI---TH-PVQGEAAAGVVL 126
Score = 37.5 bits (83), Expect = 0.22
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS + N
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI-NVVH 169
Query: 503 ATMLPL 520
AT+ L
Sbjct: 170 ATVAAL 175
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 39.5 bits (88), Expect = 0.055
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 475
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
Score = 39.1 bits (87), Expect = 0.072
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
+++L + K + G+R RF A V +GD NG +G+G EV AI A
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKA 69
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 39.1 bits (87), Expect = 0.072
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
D+++ I V K + G+R F A V +GD G +G G EV AIR A
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKA 74
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 38.7 bits (86), Expect = 0.096
Identities = 27/79 (34%), Positives = 36/79 (45%)
Frame = +3
Query: 9 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 188
KI E + LF P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 189 NGHIGLGXKCRXEVATAIR 245
GH GL C EVATAI+
Sbjct: 98 -GHSGLSSMCSGEVATAIQ 115
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.096
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 475
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 36.7 bits (81), Expect = 0.39
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
++++ I V + G+R F A V +GD G +G G EV AI+ A+
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAV 142
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 38.7 bits (86), Expect = 0.096
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
L ++++ I V K + G+R F A V +GD NG +G G +V AIR +
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGV 69
Score = 37.9 bits (84), Expect = 0.17
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS N K
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGSHNP-HNMVK 143
Query: 503 ATM 511
AT+
Sbjct: 144 ATI 146
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 38.3 bits (85), Expect = 0.13
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 84 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA 251
G L ++++ I V K + G+R F A V +GD G +G G EV AI A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKA 111
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 344 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKAT 508
G+ G+ V L AP GTGI++ + + + GV D T + G++ N +AT
Sbjct: 136 GRFGAGLVYLRSAPSGTGIIAGGPMRAIFESLGVADVVTKSVGTSNPY-NMIRAT 189
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 37.9 bits (84), Expect = 0.17
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G T N +
Sbjct: 81 TIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMG-TSNPHNMIR 139
Query: 503 ATMLPL-----PRHMPT 538
ATM L P+H+ T
Sbjct: 140 ATMKALSKQNSPKHIAT 156
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 37.5 bits (83), Expect = 0.22
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 484 LGKFC*SHNA---AIAKTYAYLTPDLWRDIPLT 573
LG FC + A AI+KTY+YLTPDLW++ T
Sbjct: 118 LGFFCCAAKATFDAISKTYSYLTPDLWKETVFT 150
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 37.5 bits (83), Expect = 0.22
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 99 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAIS 257
+ V++I V K + G++ F+A V +G+ G +G+G +V A+R ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVA 71
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 314 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 493
K +++ G G V + PA GTG+++ + +L++AGV++ GS L N
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPLNN 143
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.29
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 254 NSASNGSGDFLSALXTQTNMTVVVANGNKCLET 156
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 37.1 bits (82), Expect = 0.29
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+P + G +V L PA GTG+ + + +L GV D ++GS+ N K
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSSNP-HNLVK 143
Query: 503 ATMLPL 520
AT+ L
Sbjct: 144 ATIQAL 149
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 37.1 bits (82), Expect = 0.29
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGSTGTLGNFA 499
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS ++ N
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGSRTSI-NVI 142
Query: 500 KATM 511
+A M
Sbjct: 143 RAVM 146
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 36.7 bits (81), Expect = 0.39
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 78 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLG-XKCRXEVATAI 242
++ L + L + V QT G+ F A V +GD NG +GLG K R E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.39
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 347 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 478
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 36.3 bits (80), Expect = 0.51
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIR 245
L ++V+ I K + G+R F A +GD NG +G+G EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
Score = 36.3 bits (80), Expect = 0.51
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 314 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 475
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 35.9 bits (79), Expect = 0.68
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIR 245
L ++VL + K + G++ F A + +GD G +G G E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 35.5 bits (78), Expect = 0.89
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST N +
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGSTNPY-NIVR 148
Query: 503 ATM 511
AT+
Sbjct: 149 ATL 151
Score = 33.5 bits (73), Expect = 3.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 93 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGAI 254
L ++++ + V K + G+ F A +GD G +G+G EV A++ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAM 74
>UniRef50_UPI0000D998E5 Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 84
Score = 35.1 bits (77), Expect = 1.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 514 AIAKTYAYLTPDLWRDIPLT 573
AI+KTY+YLTPDLW++ T
Sbjct: 27 AISKTYSYLTPDLWKETVFT 46
>UniRef50_Q6TEI0 Cluster: Type I polyketide synthase; n=1;
Streptomyces diastaticus|Rep: Type I polyketide synthase
- Streptomyces diastaticus
Length = 3179
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = -2
Query: 525 LGNGSIVALAKFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHL 346
L G IV+L + P PR + T A+ R+ L GADT +G R T +
Sbjct: 2608 LPGGGIVSLLAMAEGPDTPRVPTGLAATLALLRALLSRGADTPLWSVTSGAVRADTADTV 2667
Query: 345 PVTLQGTVCG 316
P Q VCG
Sbjct: 2668 PHPEQAAVCG 2677
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 320 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 475
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_A3M596 Cluster: Cobalamin-5-phosphate synthase CobS; n=1;
Acinetobacter baumannii ATCC 17978|Rep:
Cobalamin-5-phosphate synthase CobS - Acinetobacter
baumannii (strain ATCC 17978 / NCDC KC 755)
Length = 173
Score = 33.9 bits (74), Expect = 2.7
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -2
Query: 510 IVALAKFPKVPV--EPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVT 337
I+ L KF V V E + C P + R T P R G+ R++T+ HLP T
Sbjct: 42 IICLLKFALVYVLIEQHQSLFLICIPILGRVVPSILFLTTPYVREKGLGRSLTD-HLPKT 100
Query: 336 LQGTVCGFPILLP 298
+ GF +LLP
Sbjct: 101 ASWIITGFVLLLP 113
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 33.9 bits (74), Expect = 2.7
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
TV ++ K G+ V L P P G G+ PV + + G+ D S GST + N K
Sbjct: 264 TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVGITDLSASIYGSTNPV-NVVK 322
Query: 503 ATM 511
A +
Sbjct: 323 AAL 325
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 33.5 bits (73), Expect = 3.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFF 80
+GK+ ++ I+ F + IKEFEI+D F
Sbjct: 47 DGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 33.1 bits (72), Expect = 4.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 105 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATA 239
++ + V K + G+R F V IGD G +G G EV+ A
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEA 64
>UniRef50_Q8YTV3 Cluster: Ferrichrome-iron receptor; n=7;
Cyanobacteria|Rep: Ferrichrome-iron receptor - Anabaena
sp. (strain PCC 7120)
Length = 857
Score = 32.7 bits (71), Expect = 6.3
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -2
Query: 543 SEVGICLGNGSIVALAKFPKVPVEPRAEV*QSCTPAI*RSFLGTG-ADTIPVPRGAGISR 367
S+ G+ G +V A+ PK+P EP + Q TP + TG D VP +R
Sbjct: 163 SDEGLIFGLTPVVTSAQTPKLPEEPETQTEQPSTPDQPIELVVTGQQDRYSVPNATTATR 222
Query: 366 TVT 358
T T
Sbjct: 223 TDT 225
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 32.7 bits (71), Expect = 6.3
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 81 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIRGA-IS 257
L ++ +++++I + + G+ R+K + +G+ G IGLG + AI A I
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGVSKNININKAIISAKIK 153
Query: 258 LLSCLFY 278
L+ ++Y
Sbjct: 154 ALNNIYY 160
>UniRef50_A2AKP6 Cluster: Novel protein; n=12; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 982
Score = 32.3 bits (70), Expect = 8.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 304 QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS 417
Q+++ HRPLQG Q D+CP W +C+ S
Sbjct: 945 QEKRLLHRPLQGSSQQGHTFHLEDACPHSPWVSLCSPS 982
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 32.3 bits (70), Expect = 8.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 444 TPAI*RSFLGTGADTIPVPRGAGISRTVTEP 352
TP + RS G GA T+P RG+G+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,860,833
Number of Sequences: 1657284
Number of extensions: 14237767
Number of successful extensions: 38207
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 36559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38176
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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