Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00273
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.9  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    21   9.9  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    21   9.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 257 GNSASNGSGD 228
           GNSASN SGD
Sbjct: 347 GNSASNSSGD 356


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 538 GRHMSWQWQHCGFSKISQGAS 476
           G H+ W +  C  S   +GAS
Sbjct: 751 GLHLDWNYPVCWQSNCKKGAS 771


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 449 DCYTSARGSTGTLGNFAKAT 508
           D Y    G TG +GN  KAT
Sbjct: 491 DEYVHRIGRTGRVGNKGKAT 510


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 381 PLVVLELCLRQFLRSFFR 434
           PL+V+E C R  L+++ R
Sbjct: 528 PLLVVEYCSRGDLQTYLR 545


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 254 NSASNGSGDFLSALXTQTNMTVVVANGNK 168
           NS +NGS D +      ++    + NG+K
Sbjct: 281 NSTTNGSPDVIKVEPELSDSEKTLCNGSK 309


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 121 LYRNKHVPDSAHVSRHL 171
           L + K  PD A + RHL
Sbjct: 51  LEKGKCTPDGAELKRHL 67


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 290 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPA 382
           G  G      HT   K+ G  GSV +R  PA
Sbjct: 236 GNAGTHFWHAHTGLQKMDGLYGSVVIRQPPA 266


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 290 GYWGNKIGKPHTVPCKVTGKCGSVTVRLIPA 382
           G  G      HT   K+ G  GSV +R  PA
Sbjct: 236 GNAGTHFWHAHTGLQKMDGLYGSVVIRQPPA 266


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 370 PDCYRTTLAGDLARDGVWLSD 308
           PD  R+  AG    DG  LSD
Sbjct: 418 PDQQRSIFAGKQLEDGRTLSD 438


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 370 PDCYRTTLAGDLARDGVWLSD 308
           PD  R+  AG    DG  LSD
Sbjct: 86  PDQQRSIFAGKQLEDGRTLSD 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,885
Number of Sequences: 336
Number of extensions: 3273
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)