Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00273
(574 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 175 4e-44
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 175 4e-44
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 175 4e-44
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 175 4e-44
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 174 8e-44
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 1.9
AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p pro... 29 3.4
AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop prote... 29 3.4
AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-P... 29 3.4
AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-P... 29 3.4
AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-P... 29 3.4
AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-P... 29 3.4
BT022846-1|AAY55262.1| 612|Drosophila melanogaster IP13005p pro... 28 7.8
AY113481-1|AAM29486.1| 253|Drosophila melanogaster RE45066p pro... 28 7.8
AE013599-3809|AAF47159.1| 603|Drosophila melanogaster CG10339-P... 28 7.8
AE013599-3521|AAF46938.1| 253|Drosophila melanogaster CG9896-PA... 28 7.8
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 175 bits (426), Expect = 4e-44
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223
Score = 155 bits (377), Expect = 3e-38
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIG
Sbjct: 55 EGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
DNNGHIGLG KC EVATAIRGAI L
Sbjct: 115 DNNGHIGLGVKCSKEVATAIRGAIIL 140
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPL 570
LG F + AAIAKTYAYLTPDLW+++PL
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPL 244
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 175 bits (426), Expect = 4e-44
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223
Score = 155 bits (377), Expect = 3e-38
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIG
Sbjct: 55 EGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
DNNGHIGLG KC EVATAIRGAI L
Sbjct: 115 DNNGHIGLGVKCSKEVATAIRGAIIL 140
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPL 570
LG F + AAIAKTYAYLTPDLW+++PL
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPL 244
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 175 bits (426), Expect = 4e-44
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223
Score = 155 bits (377), Expect = 3e-38
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIG
Sbjct: 55 EGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
DNNGHIGLG KC EVATAIRGAI L
Sbjct: 115 DNNGHIGLGVKCSKEVATAIRGAIIL 140
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPL 570
LG F + AAIAKTYAYLTPDLW+++PL
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPL 244
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 175 bits (426), Expect = 4e-44
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTM 199
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223
Score = 155 bits (377), Expect = 3e-38
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIG
Sbjct: 55 EGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
DNNGHIGLG KC EVATAIRGAI L
Sbjct: 115 DNNGHIGLGVKCSKEVATAIRGAIIL 140
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPL 570
LG F + AAIAKTYAYLTPDLW+++PL
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPL 244
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 174 bits (423), Expect = 8e-44
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +2
Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL M
Sbjct: 140 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTM 199
Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
AG++DCYTSARGSTGTLGNFAKAT
Sbjct: 200 AGIEDCYTSARGSTGTLGNFAKAT 223
Score = 155 bits (377), Expect = 3e-38
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = +3
Query: 3 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
EGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIG
Sbjct: 55 EGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIG 114
Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
DNNGHIGLG KC EVATAIRGAI L
Sbjct: 115 DNNGHIGLGVKCSKEVATAIRGAIIL 140
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRDIPL 570
LG F + AAIAKTYAYLTPDLW+++PL
Sbjct: 216 LGNFAKATYAAIAKTYAYLTPDLWKEMPL 244
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 317 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 439
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p
protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 353 GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATMLPL 520
G + P G G+V + + ++ G++D Y GST + N AKA + L
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFFIGL 306
>AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop protein
protein.
Length = 1023
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T K T CG +P G G SAP P +L A C +S+ ST + N +K
Sbjct: 332 TAHMKETQHCGVQIPSPLPTG-GVGTPSAPPPTRLATSASNSAC-SSSSSSTSSSSNSSK 389
Query: 503 ATM-------LPLPRHM 532
+ + +PLPR +
Sbjct: 390 SELNMLIKETMPLPRKL 406
>AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-PC,
isoform C protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 353 GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATMLPL 520
G + P G G+V + + ++ G++D Y GST + N AKA + L
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFFIGL 306
>AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-PA,
isoform A protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 353 GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATMLPL 520
G + P G G+V + + ++ G++D Y GST + N AKA + L
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFFIGL 306
>AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-PB,
isoform B protein.
Length = 916
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 353 GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATMLPL 520
G + P G G+V + + ++ G++D Y GST + N AKA + L
Sbjct: 252 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFFIGL 306
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 353 GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATMLPL 520
G + P G G+V + + ++ G++D Y GST + N AKA + L
Sbjct: 529 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFFIGL 583
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 353 GSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATMLPL 520
G + P G G+V + + ++ G++D Y GST + N AKA + L
Sbjct: 806 GKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAKAFFIGL 860
>AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-PA
protein.
Length = 1024
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Frame = +2
Query: 323 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 502
T K T CG +P G G SAP P +L A C +S+ ST + N +K
Sbjct: 333 TAHMKETQHCGVQIPSPLPTG-GVGTPSAPPPTRLATSASNSAC-SSSSSSTSSSSNSSK 390
Query: 503 ATM-------LPLPRHM 532
+ + +PLPR +
Sbjct: 391 SELNMLIKETMPLPRKL 407
>BT022846-1|AAY55262.1| 612|Drosophila melanogaster IP13005p
protein.
Length = 612
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +1
Query: 79 SSARP*MMRF*RSCLYRNKHVPDSAHVSRHLLPLATTTVILVWVXSA--XRKSPL---PF 243
SSA+ ++ +CLY N VPD LP ++VW+ S SP PF
Sbjct: 124 SSAQDAERKYEENCLYLNVFVPDG-------LPEINGYAVVVWIHSGDFSTGSPADVEPF 176
Query: 244 EALFPC*VVCFTSSKRL 294
+ +F V+ T S RL
Sbjct: 177 QLVFKQKVIVVTFSYRL 193
>AY113481-1|AAM29486.1| 253|Drosophila melanogaster RE45066p
protein.
Length = 253
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 260 QGNSASNGSGDFLSALXTQTNMTVVVANGNK 168
+GN ++ +G L L T T +T++V+ GN+
Sbjct: 223 EGNGSTRAAGSSLGLLLTGTLLTLLVSRGNR 253
>AE013599-3809|AAF47159.1| 603|Drosophila melanogaster CG10339-PA
protein.
Length = 603
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +1
Query: 79 SSARP*MMRF*RSCLYRNKHVPDSAHVSRHLLPLATTTVILVWVXSA--XRKSPL---PF 243
SSA+ ++ +CLY N VPD LP ++VW+ S SP PF
Sbjct: 115 SSAQDAERKYEENCLYLNVFVPDG-------LPEINGYAVVVWIHSGDFSTGSPADVEPF 167
Query: 244 EALFPC*VVCFTSSKRL 294
+ +F V+ T S RL
Sbjct: 168 QLVFKQKVIVVTFSYRL 184
>AE013599-3521|AAF46938.1| 253|Drosophila melanogaster CG9896-PA
protein.
Length = 253
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 260 QGNSASNGSGDFLSALXTQTNMTVVVANGNK 168
+GN ++ +G L L T T +T++V+ GN+
Sbjct: 223 EGNGSTRAAGSSLGLLLTGTLLTLLVSRGNR 253
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,995,760
Number of Sequences: 53049
Number of extensions: 702980
Number of successful extensions: 1860
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1860
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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