Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00273
(574 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 0.93
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 0.93
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 0.93
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 0.93
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 3.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 3.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 3.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 3.8
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 5.0
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 6.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 6.6
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 6.6
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 6.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.6
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.93
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 8 KNRQTREHLLVFFT 49
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 0.93
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 8 KNRQTREHLLVFFT 49
KN QTREH L+ FT
Sbjct: 56 KNGQTREHALLAFT 69
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 0.93
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 8 KNRQTREHLLVFFT 49
KN QTREH L+ FT
Sbjct: 72 KNGQTREHALLAFT 85
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.93
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 8 KNRQTREHLLVFFT 49
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 191 RSYWFGXXVQXGSRHCHSRRYFLAKLSVL 277
R Y+ G R C R+Y + KL ++
Sbjct: 473 RHYYAFVPFSAGPRSCVGRKYAMLKLKIV 501
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 177 IGDNNGHIGLGXKCRXEVATAIRGAISLLSCL 272
+ NN I KC+ RG LSCL
Sbjct: 552 LASNNDRIRQVTKCKATNEETYRGGKGALSCL 583
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 177 IGDNNGHIGLGXKCRXEVATAIRGAISLLSCL 272
+ NN I KC+ RG LSCL
Sbjct: 552 LASNNDRIRQVTKCKATNEETYRGGKGALSCL 583
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 177 IGDNNGHIGLGXKCRXEVATAIRGAISLLSCL 272
+ NN I KC+ RG LSCL
Sbjct: 552 LASNNDRIRQVTKCKATNEETYRGGKGALSCL 583
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +2
Query: 332 CKVTGKCGSVTVRLIPAPRGT 394
C + G CG + + P+GT
Sbjct: 75 CPICGACGDIAHTVKYCPKGT 95
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 518 LPRHMPTSL 544
LP+H+PTSL
Sbjct: 379 LPKHLPTSL 387
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 190 TVILVWVXSAXRKSPL 237
T++LVW SA SP+
Sbjct: 306 TILLVWAISAAIGSPI 321
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 491 NFAKATMLPLPRHMP 535
+FAK LPLP+H+P
Sbjct: 499 DFAKT--LPLPQHLP 511
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 491 NFAKATMLPLPRHMP 535
+FAK LPLP+H+P
Sbjct: 414 DFAKT--LPLPQHLP 426
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 491 NFAKATMLPLPRHMP 535
+FAK LPLP+H+P
Sbjct: 733 DFAKT--LPLPQHLP 745
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,902
Number of Sequences: 438
Number of extensions: 3835
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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