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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00273
         (574 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)             156   1e-38
At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) simila...   156   1e-38
At1g58983.1 68414.m06666 40S ribosomal protein S2, putative simi...   156   1e-38
At1g58684.1 68414.m06657 40S ribosomal protein S2, putative           156   1e-38
At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) simila...   156   1e-38
At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S ri...   155   1e-38
At2g33800.1 68415.m04147 ribosomal protein S5 family protein con...    45   4e-05
At1g64880.1 68414.m07355 ribosomal protein S5 family protein con...    29   2.2  
At3g18530.1 68416.m02357 expressed protein similar to unknown pr...    29   2.9  
At1g72390.1 68414.m08373 expressed protein                             28   3.8  
At2g04050.1 68415.m00386 MATE efflux family protein similar to r...    28   5.1  
At1g73870.1 68414.m08554 zinc finger (B-box type) family protein       28   5.1  
At1g28210.2 68414.m03463 DNAJ heat shock protein, putative stron...    28   5.1  
At1g28210.1 68414.m03462 DNAJ heat shock protein, putative stron...    28   5.1  
At5g35970.1 68418.m04332 DNA-binding protein, putative similar t...    27   8.9  
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A...    27   8.9  
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A...    27   8.9  

>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
          Length = 285

 Score =  156 bits (378), Expect = 1e-38
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ 
Sbjct: 151 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 210

Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
           AG+ D +TS+RGST TLGNF KAT
Sbjct: 211 AGIDDVFTSSRGSTKTLGNFVKAT 234



 Score =  137 bits (331), Expect = 6e-33
 Identities = 62/85 (72%), Positives = 72/85 (84%)
 Frame = +3

Query: 6   GKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGD 185
           G I ++E IYL SLP+KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +GD
Sbjct: 67  GHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD 126

Query: 186 NNGHIGLGXKCRXEVATAIRGAISL 260
            NGH+GLG KC  EVATAIRGAI L
Sbjct: 127 GNGHVGLGVKCSKEVATAIRGAIIL 151



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRD 561
           LG F  +    + KTY +LTP+ W++
Sbjct: 227 LGNFVKATFDCLQKTYGFLTPEFWKE 252


>At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) similar
           to ribosomal protein S2 GI:430711 from [Drosophila
           melanogaster]
          Length = 284

 Score =  156 bits (378), Expect = 1e-38
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ 
Sbjct: 150 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 209

Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
           AG+ D +TS+RGST TLGNF KAT
Sbjct: 210 AGIDDVFTSSRGSTKTLGNFVKAT 233



 Score =  139 bits (337), Expect = 1e-33
 Identities = 64/86 (74%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
           + KI KLE IYL SLP+KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65  DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124

Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
           D NGH+GLG KC  EVATAIRGAI L
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIIL 150



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRD 561
           LG F  +    + KTY +LTP+ W++
Sbjct: 226 LGNFVKATFDCLQKTYGFLTPEFWKE 251


>At1g58983.1 68414.m06666 40S ribosomal protein S2, putative similar
           to ribosomal protein S2 GI:939717 from [Urechis caupo]
          Length = 284

 Score =  156 bits (378), Expect = 1e-38
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ 
Sbjct: 150 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 209

Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
           AG+ D +TS+RGST TLGNF KAT
Sbjct: 210 AGIDDVFTSSRGSTKTLGNFVKAT 233



 Score =  139 bits (337), Expect = 1e-33
 Identities = 64/86 (74%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
           + KI KLE IYL SLP+KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65  DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124

Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
           D NGH+GLG KC  EVATAIRGAI L
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIIL 150



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRD 561
           LG F  +    + KTY +LTP+ W++
Sbjct: 226 LGNFVKATFDCLQKTYGFLTPEFWKE 251


>At1g58684.1 68414.m06657 40S ribosomal protein S2, putative 
          Length = 284

 Score =  156 bits (378), Expect = 1e-38
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ 
Sbjct: 150 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 209

Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
           AG+ D +TS+RGST TLGNF KAT
Sbjct: 210 AGIDDVFTSSRGSTKTLGNFVKAT 233



 Score =  139 bits (337), Expect = 1e-33
 Identities = 64/86 (74%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
           + KI KLE IYL SLP+KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65  DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124

Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
           D NGH+GLG KC  EVATAIRGAI L
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIIL 150



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRD 561
           LG F  +    + KTY +LTP+ W++
Sbjct: 226 LGNFVKATFDCLQKTYGFLTPEFWKE 251


>At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) similar
           to ribosomal protein S2 GI:939717 from (Urechis caupo)
          Length = 284

 Score =  156 bits (378), Expect = 1e-38
 Identities = 69/84 (82%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
           LAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ 
Sbjct: 150 LAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 209

Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
           AG+ D +TS+RGST TLGNF KAT
Sbjct: 210 AGIDDVFTSSRGSTKTLGNFVKAT 233



 Score =  139 bits (337), Expect = 1e-33
 Identities = 64/86 (74%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
           + KI KLE IYL SLP+KE++IID  +GP+L DEV+KIMPVQKQTRAGQRTRFKAFV +G
Sbjct: 65  DNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVG 124

Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
           D NGH+GLG KC  EVATAIRGAI L
Sbjct: 125 DGNGHVGLGVKCSKEVATAIRGAIIL 150



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRD 561
           LG F  +    + KTY +LTP+ W++
Sbjct: 226 LGNFVKATFDCLQKTYGFLTPEFWKE 251


>At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S
           ribosomal protein S2 - Arabidopsis thaliana,
           SWISSPROT:RS2_ARATH
          Length = 276

 Score =  155 bits (377), Expect = 1e-38
 Identities = 68/84 (80%), Positives = 78/84 (92%)
 Frame = +2

Query: 257 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 436
           LAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVR++PAPRG+GIV+A VPKK+LQ 
Sbjct: 142 LAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 201

Query: 437 AGVQDCYTSARGSTGTLGNFAKAT 508
           AG+ D +TS+RGST TLGNF KAT
Sbjct: 202 AGIDDVFTSSRGSTKTLGNFVKAT 225



 Score =  144 bits (348), Expect = 5e-35
 Identities = 65/86 (75%), Positives = 75/86 (87%)
 Frame = +3

Query: 3   EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIG 182
           EGKI K+E IYL SLP+KE++IID  +GPSL DEV+KIMPVQKQTRAGQRTRFKAF+ +G
Sbjct: 57  EGKITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVG 116

Query: 183 DNNGHIGLGXKCRXEVATAIRGAISL 260
           D+NGH+GLG KC  EVATAIRGAI L
Sbjct: 117 DSNGHVGLGVKCSKEVATAIRGAIIL 142



 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 484 LGKFC*SHNAAIAKTYAYLTPDLWRD 561
           LG F  +    + KTY +LTP+ W++
Sbjct: 218 LGNFVKATFDCLQKTYGFLTPEFWKE 243


>At2g33800.1 68415.m04147 ribosomal protein S5 family protein
           contains Pfam profiles PF03719: Ribosomal protein S5,
           C-terminal domain, PF00333: Ribosomal protein S5,
           N-terminal domain
          Length = 303

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 27/81 (33%), Positives = 41/81 (50%)
 Frame = +2

Query: 269 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 448
           S +  RR      + K  T P +  G  G+  V L PA  GTG+++    + +L+MAGV+
Sbjct: 199 SAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 258

Query: 449 DCYTSARGSTGTLGNFAKATM 511
           +      GS   L N A+AT+
Sbjct: 259 NALGKQLGSNNALNN-ARATL 278



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = +3

Query: 99  DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGXKCRXEVATAIR 245
           + V+++  V K  + G++ +F+A V +GD  G++G+G     EV  A++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQ 197


>At1g64880.1 68414.m07355 ribosomal protein S5 family protein
           contains similarity to 30S ribosomal protein S5
           GI:6969105 from [Campylobacter jejuni]
          Length = 515

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +2

Query: 320 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFA 499
           HT+   +        + L PAP  TG+ +  V K +L +AG ++  +   GS  +  N  
Sbjct: 427 HTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAGFKNIKSKVIGSRNSY-NTV 485

Query: 500 KATMLPL 520
           KA +  L
Sbjct: 486 KAVLKAL 492


>At3g18530.1 68416.m02357 expressed protein similar to unknown
           protein GB:AAF24615 from [Arabidopsis thaliana]
          Length = 297

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = -1

Query: 316 LSDLVTPVTSSNW*NRQLSKEIAPRMAVATSXLHXXPKPI*PLLSPMATNALKRVRCPAR 137
           L  L+T +   +  +++   E A R  VA +  H  P  + P L P   N   R+R  A 
Sbjct: 163 LDRLLTQLLLKSSQDKRFVCEAAERALVAMTT-HVSPALLLPKLRPCLKNKSPRIRAKAS 221

Query: 136 VCFCTGMIFRTSSFR 92
            CF +G + R  + R
Sbjct: 222 ACF-SGCVPRLEAAR 235


>At1g72390.1 68414.m08373 expressed protein
          Length = 1088

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -3

Query: 479  QLNHELRCSSPVHQPSEE-AS*ELAQTQFQYHEGQESAGLLQNHT 348
            QL H+ +   P+ QPS++ A     Q Q Q HE  + A   Q  T
Sbjct: 938  QLQHQQQLQQPMSQPSQQLAQSPQQQQQLQQHEQPQQAQQQQQAT 982


>At2g04050.1 68415.m00386 MATE efflux family protein similar to
           ripening regulated protein DDTFR18 [Lycopersicon
           esculentum] GI:12231296; contains Pfam profile: PF01554
           uncharacterized membrane protein family
          Length = 476

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +2

Query: 320 HTVPCKVTGKCGSVTVRL 373
           H VPCK T K G VTV L
Sbjct: 11  HLVPCKDTWKSGQVTVEL 28


>At1g73870.1 68414.m08554 zinc finger (B-box type) family protein
          Length = 392

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 480 APWEILLKPQCCHCQDICLPH 542
           +PW+  +KP+C    + CLPH
Sbjct: 295 SPWKTGIKPECMLGGNTCLPH 315


>At1g28210.2 68414.m03463 DNAJ heat shock protein, putative strong
           similarity to mitochondrial DnaJ protein (AtJ1)
           GI:564030 from [Arabidopsis thaliana]; contains Pfam
           profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
           region, PF00684: DnaJ central domain (4 repeats);
           identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
          Length = 427

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +2

Query: 260 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 439
           A +S+ P  RG  G     P T  C+     G +      + RG+GIV      +L+   
Sbjct: 198 AAMSICPTCRGV-GRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPG 256

Query: 440 GVQ 448
           GV+
Sbjct: 257 GVE 259


>At1g28210.1 68414.m03462 DNAJ heat shock protein, putative strong
           similarity to mitochondrial DnaJ protein (AtJ1)
           GI:564030 from [Arabidopsis thaliana]; contains Pfam
           profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
           region, PF00684: DnaJ central domain (4 repeats);
           identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
          Length = 408

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = +2

Query: 260 AKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 439
           A +S+ P  RG  G     P T  C+     G +      + RG+GIV      +L+   
Sbjct: 198 AAMSICPTCRGV-GRVTIPPFTASCQTCKGTGHIIKEYCMSCRGSGIVEGTKTAELVIPG 256

Query: 440 GVQ 448
           GV+
Sbjct: 257 GVE 259


>At5g35970.1 68418.m04332 DNA-binding protein, putative similar to
           SWISS-PROT:Q60560 DNA-binding protein SMUBP-2
           (Immunoglobulin MU binding protein 2, SMUBP-2)
           [Mesocricetus auratus]
          Length = 961

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 145 PARVCFCTGMIFRTSSFRDGPRKKSMISNSL 53
           P R  FC+G+   +S  +  PR+KS +S+ L
Sbjct: 43  PTRKVFCSGVNGGSSVTKKKPRRKSNVSDKL 73


>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 390

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +3

Query: 378 LPLVVLELCLRQFLRSFFRWLVYRTATPQLVVQLAPWEI 494
           + ++++ LCL   L    + ++ RTAT    +  +PW +
Sbjct: 1   MEMILITLCLTTLLALLLKSILKRTATKNFNLPPSPWRL 39


>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 497

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +3

Query: 378 LPLVVLELCLRQFLRSFFRWLVYRTATPQLVVQLAPWEI 494
           + ++++ LCL   L    + ++ RTAT    +  +PW +
Sbjct: 1   MEMILITLCLTTLLALLLKSILKRTATKNFNLPPSPWRL 39


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,183,823
Number of Sequences: 28952
Number of extensions: 316990
Number of successful extensions: 854
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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