Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00271
(725 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.4
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 22 4.4
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 22 4.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 5.8
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 5.8
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 157 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 157 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 157 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 157 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 113 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 146
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 157 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 555 PSRDTARRALPTPALLNSTLRTSPTEK--TSNSLTK 656
P+ TA + L +PA +ST TS TEK T+N+ +K
Sbjct: 157 PATSTASQNLSSPA--SSTSSTSSTEKAGTNNNNSK 190
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 635 NLQLADQTLAQRPNDLSGLLRN 700
NLQ D+ L R + + LLRN
Sbjct: 113 NLQYIDEVLKNRDSHETNLLRN 134
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 635 NLQLADQTLAQRPNDLSGLLRN 700
NLQ D+ L R + + LLRN
Sbjct: 113 NLQYIDEVLKNRDSHETNLLRN 134
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 145 KQQLDGDSLSPDSRESVEV 201
+QQ+DG PDS S+ +
Sbjct: 100 QQQMDGQEYRPDSPSSMHM 118
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 145 KQQLDGDSLSPDSRESVEV 201
+QQ+DG PDS S+ +
Sbjct: 102 QQQMDGQEYRPDSPSSMHM 120
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,389
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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