Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00271
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 75 7e-14
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 49 3e-06
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 49 3e-06
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 45 5e-05
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 45 5e-05
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 34 0.12
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 34 0.12
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 34 0.12
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 33 0.27
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 33 0.27
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 31 1.1
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 29 2.6
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 29 3.4
AF016445-11|AAC69054.1| 248|Caenorhabditis elegans Pharyngeal g... 29 3.4
U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated p... 29 4.5
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 29 4.5
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 29 4.5
EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like... 29 4.5
Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical pr... 28 5.9
U80440-3|AAK21470.2| 380|Caenorhabditis elegans Hypothetical pr... 28 5.9
U01918-1|AAA85278.1| 359|Caenorhabditis elegans dpy-20 protein. 28 5.9
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 28 5.9
AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical... 28 7.8
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 74.5 bits (175), Expect = 7e-14
Identities = 35/78 (44%), Positives = 55/78 (70%)
Frame = +3
Query: 309 AEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDC 488
++A +LK EGN+LMKA ++ A++KY AI+++ R+ VY+CNRAAA+ RL + A+ DC
Sbjct: 103 SQANKLKEEGNDLMKASQFEAAVQKYNAAIKLN-RDPVYFCNRAAAYCRLEQYDLAIQDC 161
Query: 489 TTALALHLTIARRTDALG 542
TALAL + ++ +G
Sbjct: 162 RTALALDPSYSKAWGRMG 179
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Frame = +2
Query: 509 PDYSKAYGRLGLALTALERHCEXXXXXXXXXQLDPENESYRENLQLADQTL----AQRP- 673
P YSKA+GR+GLA + R+ +L+P ESY+ NL++A+ L + RP
Sbjct: 169 PSYSKAWGRMGLAYSCQNRYEHAAEAYKKALELEPNQESYKNNLKIAEDKLKELESSRPA 228
Query: 674 ---NDLSGLL 694
N L+GLL
Sbjct: 229 PGANPLAGLL 238
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 482
N A+ KN+GNE K Y A+ Y A++ DP NA+ Y NRAA +L + + A+
Sbjct: 136 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALD 195
Query: 483 DCTTALAL 506
DC T + L
Sbjct: 196 DCDTCIRL 203
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 327 KNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALAL 506
K+ GN K + + +A Y +AIE+DP N +Y N+AA +F E ++C
Sbjct: 9 KDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE----EKKFAECVQFCEK 64
Query: 507 HLTIARRTDA 536
+ + R T A
Sbjct: 65 AVEVGRETRA 74
>Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical
protein F52H3.5 protein.
Length = 179
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +3
Query: 252 SGLDLLQLVRQRLGPPANKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYC 431
SG+ + L L P + + L+ EG L + R +EA+EK+T+A+E+ P+N Y
Sbjct: 23 SGIAEIHLESDSLEHPGYELSLQ-LEREGVALAEGVRLDEAIEKFTKALEVCPKNPSAYN 81
Query: 432 NRAAAHFRLCDPEAAVSDCTTALAL 506
NRA A+ PE A+ D AL+L
Sbjct: 82 NRAQAYRLQNKPEKALDDLNEALSL 106
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +3
Query: 306 KAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSD 485
K A+RLK +GNE K ++Y++A+ Y++++E P + + + NRA A P A D
Sbjct: 5 KKIAQRLKEQGNEAFKKKKYHKAMTIYSKSLEHWP-DPIVFSNRAQAGLNADLPLLAQID 63
Query: 486 CTTALALHLTIAR 524
CT AL L T A+
Sbjct: 64 CTAALNLDSTAAK 76
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 49.2 bits (112), Expect = 3e-06
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEI--DPRNA---VYYCNRAAAHFRLCDPEAAV 479
AE +++EGN +K + Y +A E YT A+++ D A V Y NRA A + D E A
Sbjct: 8 AEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGAQ 67
Query: 480 SDCTTALALHLTIARRTDALGSRSLPSRDTARRALPTPALLNSTLRTSPTEK 635
SDCT AL AL RSL +R+ P LR SP +K
Sbjct: 68 SDCTKALEFD---GADVKALFRRSL-AREQLGNVGPAFQDAKEALRLSPNDK 115
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein.
Length = 961
Score = 49.2 bits (112), Expect = 3e-06
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEI--DPRNA---VYYCNRAAAHFRLCDPEAAV 479
AE +++EGN +K + Y +A E YT A+++ D A V Y NRA A + D E A
Sbjct: 8 AEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGAQ 67
Query: 480 SDCTTALALHLTIARRTDALGSRSLPSRDTARRALPTPALLNSTLRTSPTEK 635
SDCT AL AL RSL +R+ P LR SP +K
Sbjct: 68 SDCTKALEFD---GADVKALFRRSL-AREQLGNVGPAFQDAKEALRLSPNDK 115
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 494
AE+ G + +RY++A++ Y++AI+++P YY NRA +F+L + + DC
Sbjct: 5 AEQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKR 63
Query: 495 ALALHLTIARRTDALGSRSLPSR 563
AL L + LG+ L S+
Sbjct: 64 ALELSPNEVKPLYFLGNVFLQSK 86
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 494
AE+ G + +RY++A++ Y++AI+++P YY NRA +F+L + + DC
Sbjct: 5 AEQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKR 63
Query: 495 ALALHLTIARRTDALGSRSLPSR 563
AL L + LG+ L S+
Sbjct: 64 ALELSPNEVKPLYFLGNVFLQSK 86
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +3
Query: 237 DGRCGSGLDLLQLVRQRLGPPANKA-EAERLKNEGNELMKAERYNEALEKYTRAI-EIDP 410
DG+ ++ LQ ++ +K AE K EGN+ K ++Y A + Y+ I E P
Sbjct: 68 DGKYQDTIEALQSMKYDKEDDEDKQMNAEHHKEEGNKHFKFKKYRWATDCYSNGIKENSP 127
Query: 411 R---NAVYYCNRAAAHFRLCDPEAAVSDCT 491
NAV Y NRAAA L + +A+ DC+
Sbjct: 128 DRKLNAVLYFNRAAAQKHLGNLRSAIKDCS 157
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Frame = +3
Query: 288 LGPPANKAEAERLKNEGNELMKAER------YNEALEKYTRAIEIDPRNAVYYCNRAAAH 449
+G A +A + ++ E KA+ ++ AL +T AIE +P +A+ + RA
Sbjct: 100 MGDSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVL 159
Query: 450 FRLCDPEAAVSDCTTALALH 509
+L P AA++DC A++++
Sbjct: 160 LKLKRPVAAIADCDKAISIN 179
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Frame = +3
Query: 288 LGPPANKAEAERLKNEGNELMKAER------YNEALEKYTRAIEIDPRNAVYYCNRAAAH 449
+G A +A + ++ E KA+ ++ AL +T AIE +P +A+ + RA
Sbjct: 100 MGDSAKEATEDEIEKASEERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVL 159
Query: 450 FRLCDPEAAVSDCTTALALH 509
+L P AA++DC A++++
Sbjct: 160 LKLKRPVAAIADCDKAISIN 179
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 494
A+ N GN L + + A+ Y RAI+I+P A + N A+ H + A+ +T
Sbjct: 499 ADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQSYST 558
Query: 495 ALAL 506
AL L
Sbjct: 559 ALKL 562
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 482
N AE N GN + + +ALE Y A+++ P Y N AAA D E AV+
Sbjct: 189 NNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDLEQAVT 248
Query: 483 DCTTALALH 509
AL ++
Sbjct: 249 AYFNALQIN 257
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCD 464
N A A+ N + A EA++ Y+ A+++ P YCN A H +CD
Sbjct: 529 NPAFADAHSNLASIHKDAGNMAEAIQSYSTALKLKPDFPDAYCNLAHCHQIICD 582
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 494
A+ N GN L + + A+ Y RAI+I+P A + N A+ H + A+ +T
Sbjct: 321 ADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQSYST 380
Query: 495 ALAL 506
AL L
Sbjct: 381 ALKL 384
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 482
N AE N GN + + +ALE Y A+++ P Y N AAA D E AV+
Sbjct: 11 NNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDLEQAVT 70
Query: 483 DCTTALALH 509
AL ++
Sbjct: 71 AYFNALQIN 79
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCD 464
N A A+ N + A EA++ Y+ A+++ P YCN A H +CD
Sbjct: 351 NPAFADAHSNLASIHKDAGNMAEAIQSYSTALKLKPDFPDAYCNLAHCHQIICD 404
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +3
Query: 315 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTT 494
A+ N GN L + + A+ Y RAI+I+P A + N A+ H + A+ +T
Sbjct: 499 ADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAHSNLASIHKDAGNMAEAIQSYST 558
Query: 495 ALAL 506
AL L
Sbjct: 559 ALKL 562
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 482
N AE N GN + + +ALE Y A+++ P Y N AAA D E AV+
Sbjct: 189 NNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDLEQAVT 248
Query: 483 DCTTALALH 509
AL ++
Sbjct: 249 AYFNALQIN 257
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 303 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCD 464
N A A+ N + A EA++ Y+ A+++ P YCN A H +CD
Sbjct: 529 NPAFADAHSNLASIHKDAGNMAEAIQSYSTALKLKPDFPDAYCNLAHCHQIICD 582
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 336 GNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALAL 506
G++ + ++ +AL +Y AIE+DP++ RA + + +AA+ D L L
Sbjct: 33 GSQFLARAQFADALTQYHAAIELDPKSYQAIYRRATTYLAMGRGKAAIVDLERVLEL 89
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 351 KAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSD 485
+A +EA+ + + DP +A C RA AH D ++A+ D
Sbjct: 303 EAGHISEAIAECNEILNDDPSDADILCERAEAHILDEDYDSAIED 347
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +3
Query: 318 ERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTA 497
E++ +E RY EA E Y +A+ P+N + + N +A ++ P A+ +
Sbjct: 6 EKVVHEAGSAYSDGRYQEARELYEKALRDHPKNGILHANLSAILLKIQLPPEALKHAEIS 65
Query: 498 LAL 506
+ L
Sbjct: 66 VKL 68
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 330 NEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSD 485
N +K E Y ALE AI IDP + RA A+ L + A++D
Sbjct: 67 NRAQAYLKKELYGSALEDADNAIAIDPSYVKGFYRRATANMALGRFKKALTD 118
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 313 KPNDSRTKATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIAR 441
KP + K T + + +TKR +T P +T+E +STTA A+
Sbjct: 376 KPKSTTKKPTKT--AAASTKRPPTTEKPTATTEEVKSTTAAAK 416
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 333 EGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAH 449
EG+ LM+ A+ Y A++ DP++A +C AH
Sbjct: 222 EGDNLMRNGDIGNAMLAYEAAVQKDPQDARAWCKLGLAH 260
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 333 EGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAH 449
EG+ LM+ A+ Y A++ DP++A +C AH
Sbjct: 224 EGDNLMRNGDIGNAMLAYEAAVQKDPQDARAWCKLGLAH 262
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +3
Query: 312 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPR-----NAVYYCNRAAAHFRLCDPEAA 476
+ + LK EGN + +A EKY AI P ++ N AAA +L E+A
Sbjct: 17 KVDSLKKEGNNFFANGEFEKANEKYQEAIASCPPTSTEVQSILLSNSAAALIKLRKWESA 76
Query: 477 VSDCTTALALHLT 515
V + ++ + T
Sbjct: 77 VEAASKSIEIGAT 89
>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +3
Query: 252 SGLDLLQLVRQRLGPPANKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAV 422
+ L L L++ LGP + K + +N GN L +A + EK+ + I I + A+
Sbjct: 332 TNLCCLTLLKDVLGPYSVKNSDKNQENCGNSLQEASPSSPISEKFAKEISIFSKTAL 388
>AF016445-11|AAC69054.1| 248|Caenorhabditis elegans Pharyngeal
gland toxin-relatedprotein 4 protein.
Length = 248
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -1
Query: 503 GECCGTVAHRCLGVAQPEMRSRAI--AVVDRVSWVDLYGA 390
G CC T A+ C VA P + I A D V+W + A
Sbjct: 103 GFCCSTDAYNCPNVAFPRLNCNTITKAQCDSVTWRTIIAA 142
>U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated
protein 1 protein.
Length = 285
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 399 EIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALHLTIARRT--DALGSRSLPSRDTA 572
EI +++V A +FR DP A+V++ A+ +A+ T +ALG ++L T
Sbjct: 108 EILSKDSVTVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTTLRNALGMKTLTEMLTE 167
Query: 573 RRAL 584
R A+
Sbjct: 168 REAI 171
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical protein
ZK688.5b protein.
Length = 1595
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 DALGSRSLPSRDTARRALPTPALLN--STLRTSPTEKTSNSLTKP 659
D GS P+R T PTP + +T+++SPT + S + P
Sbjct: 965 DLSGSSDQPARSTPSPPAPTPRTTSAPATVQSSPTRQESMDIDSP 1009
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
ZK688.5a protein.
Length = 1620
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 DALGSRSLPSRDTARRALPTPALLN--STLRTSPTEKTSNSLTKP 659
D GS P+R T PTP + +T+++SPT + S + P
Sbjct: 965 DLSGSSDQPARSTPSPPAPTPRTTSAPATVQSSPTRQESMDIDSP 1009
>EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like
protein UNC-1 protein.
Length = 289
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 399 EIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTTALALHLTIARRT--DALGSRSLPSRDTA 572
EI +++V A +FR DP A+V++ A+ +A+ T +ALG ++L T
Sbjct: 112 EILSKDSVTVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTTLRNALGMKTLTEMLTE 171
Query: 573 RRAL 584
R A+
Sbjct: 172 REAI 175
>Z68300-2|CAA92616.2| 440|Caenorhabditis elegans Hypothetical
protein T22B3.1 protein.
Length = 440
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 435 DCSSRPRFLGRSLWRACTFQALRCNAQLS 349
DCS F+ + W TFQA + +AQ +
Sbjct: 45 DCSGNSNFVNTNPWNNTTFQAYQTDAQFT 73
>U80440-3|AAK21470.2| 380|Caenorhabditis elegans Hypothetical
protein T21E12.2 protein.
Length = 380
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 498 LALHLTIARRTDALGSRSLPSRDTARRALPTPALLNSTLRTSPTEKTSNSLTKP*HSALT 677
L ++ + +R ++L R+LP + + P P L R+ P E N + K + T
Sbjct: 269 LLKNVVVTQRLNSLQQRALPGIENVKNIYPLPQHLLKK-RSIPIESVHNKIEKNLATTTT 327
Query: 678 I*VAYSGILL 707
+ +S +LL
Sbjct: 328 TFLLHSMLLL 337
>U01918-1|AAA85278.1| 359|Caenorhabditis elegans dpy-20 protein.
Length = 359
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 435 DCSSRPRFLGRSLWRACTFQALRCNAQLS 349
DCS F+ + W TFQA + +AQ +
Sbjct: 45 DCSGNSNFVNTNPWNNTTFQAYQTDAQFT 73
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 357 ERYNEALEKYTRAIEIDPRN 416
E+Y+EAL +A+E DPRN
Sbjct: 230 EKYDEALAVLQKAVEYDPRN 249
>AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical
protein Y57G7A.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 324 LKNEGNELMKAERYNEALEKYTRAIEIDPRN 416
LK + +L E Y +AL+ Y R +E +P N
Sbjct: 89 LKLKAMQLESTEHYQKALDIYERLVEDEPNN 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,122
Number of Sequences: 27780
Number of extensions: 263495
Number of successful extensions: 1107
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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