Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00269
         (328 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC092412-1|AAH92412.1| 1265|Homo sapiens shugoshin-like 2 (S. po...    29   4.4  
AY094614-1|AAM21971.1| 1265|Homo sapiens tripin protein.               29   4.4  
AK057940-1|BAB71617.1|  568|Homo sapiens protein ( Homo sapiens ...    29   4.4  
AC080164-1|AAY24264.1| 1103|Homo sapiens unknown protein.              29   4.4  

>BC092412-1|AAH92412.1| 1265|Homo sapiens shugoshin-like 2 (S.
           pombe) protein.
          Length = 1265

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 177 FETQSILYIYSYITDCKLWFQHEFSINQL 91
           ++TQ+IL +  Y+TD K   Q+E  IN+L
Sbjct: 878 YDTQNILELKKYVTDRKSAEQNESKINKL 906


>AY094614-1|AAM21971.1| 1265|Homo sapiens tripin protein.
          Length = 1265

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 177 FETQSILYIYSYITDCKLWFQHEFSINQL 91
           ++TQ+IL +  Y+TD K   Q+E  IN+L
Sbjct: 878 YDTQNILELKKYVTDRKSAEQNESKINKL 906


>AK057940-1|BAB71617.1|  568|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25211 fis, clone REC08060. ).
          Length = 568

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 177 FETQSILYIYSYITDCKLWFQHEFSINQL 91
           ++TQ+IL +  Y+TD K   Q+E  IN+L
Sbjct: 181 YDTQNILELKKYVTDRKSAEQNESKINKL 209


>AC080164-1|AAY24264.1| 1103|Homo sapiens unknown protein.
          Length = 1103

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 177 FETQSILYIYSYITDCKLWFQHEFSINQL 91
           ++TQ+IL +  Y+TD K   Q+E  IN+L
Sbjct: 720 YDTQNILELKKYVTDRKSAEQNESKINKL 748


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,714,590
Number of Sequences: 237096
Number of extensions: 626308
Number of successful extensions: 849
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)