Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00267
         (642 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VJ25 Cluster: CG15168-PA; n=8; Endopterygota|Rep: CG1...    73   8e-12
UniRef50_A7RYN2 Cluster: Predicted protein; n=1; Nematostella ve...    63   6e-09
UniRef50_Q09JH7 Cluster: Transmembrane protein; n=2; Arthropoda|...    61   3e-08
UniRef50_Q8K273 Cluster: Transmembrane protein 32 precursor; n=1...    58   2e-07
UniRef50_Q8N4V1 Cluster: Transmembrane protein 32 precursor; n=9...    58   2e-07
UniRef50_Q555V5 Cluster: Putative uncharacterized protein; n=2; ...    49   8e-05
UniRef50_Q17477 Cluster: Putative uncharacterized protein; n=2; ...    49   1e-04
UniRef50_Q6PV99 Cluster: Gonadotropin I beta subunit; n=3; Acipe...    36   0.63 
UniRef50_Q2HIM5 Cluster: At5g03345; n=7; Magnoliophyta|Rep: At5g...    34   2.5  
UniRef50_Q59T81 Cluster: Potential transmembrane protein; n=2; S...    34   2.5  
UniRef50_UPI000155483C Cluster: PREDICTED: similar to keratin as...    33   7.7  

>UniRef50_Q9VJ25 Cluster: CG15168-PA; n=8; Endopterygota|Rep:
           CG15168-PA - Drosophila melanogaster (Fruit fly)
          Length = 109

 Score = 72.5 bits (170), Expect = 8e-12
 Identities = 28/64 (43%), Positives = 43/64 (67%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKALSY 432
           +DI++Q V+SL  V++ ++ + GN +EI A  ++    W+T  N PSFY FNHRG+AL+ 
Sbjct: 44  LDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRALNP 103

Query: 433 DYVP 444
            Y P
Sbjct: 104 GYTP 107



 Score = 53.2 bits (122), Expect = 5e-06
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = +2

Query: 140 FHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           F+K+++I GF SL H AFSA  HR+YLR+T QE+ +LP
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLP 43


>UniRef50_A7RYN2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 109

 Score = 62.9 bits (146), Expect = 6e-09
 Identities = 29/58 (50%), Positives = 39/58 (67%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           +DI IQ V+ +     GV+ VAG  +EI AAAE+ +  WE+  N PSFY FNHRG+A+
Sbjct: 42  LDIYIQCVLGMLLGCVGVVLVAGEFKEIKAAAEMASKTWESLGNRPSFYTFNHRGRAM 99



 Score = 38.7 bits (86), Expect = 0.12
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = +2

Query: 146 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPWILSSKLWSVCLLSC 298
           +V+V  G L++ H  +SA Q R+Y ++  +EF +LP  +  +     LL C
Sbjct: 6   RVLVFFGVLAILHAGYSAVQCRTYYKLLEEEFVSLPLDIYIQCVLGMLLGC 56


>UniRef50_Q09JH7 Cluster: Transmembrane protein; n=2;
           Arthropoda|Rep: Transmembrane protein - Argas
           monolakensis
          Length = 103

 Score = 60.9 bits (141), Expect = 3e-08
 Identities = 26/59 (44%), Positives = 40/59 (67%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKALS 429
           +D+++Q+V  L   M+GV+ +AG+ +E+ A  EL    +ET  N PSFY F HRG+AL+
Sbjct: 43  LDVILQSVFCLLLTMYGVVCIAGDFKEVRATVELETKTFETFGNRPSFYTFCHRGRALA 101



 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +2

Query: 146 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPWILSSKLWSV-CLL 292
           K++V +G + L H A SA QHRSYLR+T Q+FT LP  L   L SV CLL
Sbjct: 7   KLMVTLGVVGLIHAAISAAQHRSYLRLTEQDFTILP--LDVILQSVFCLL 54


>UniRef50_Q8K273 Cluster: Transmembrane protein 32 precursor; n=17;
           Euteleostomi|Rep: Transmembrane protein 32 precursor -
           Mus musculus (Mouse)
          Length = 131

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 40/58 (68%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           +DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 43  IDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 44.8 bits (101), Expect = 0.002
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = +2

Query: 137 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           S  K +V +G  +L H AFSA QHRSY+R+T +E  +LP
Sbjct: 4   SLWKGLVGVGLFALAHAAFSAAQHRSYMRLTEKEDESLP 42


>UniRef50_Q8N4V1 Cluster: Transmembrane protein 32 precursor; n=9;
           Amniota|Rep: Transmembrane protein 32 precursor - Homo
           sapiens (Human)
          Length = 131

 Score = 57.6 bits (133), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 40/58 (68%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           +DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 43  IDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 45.2 bits (102), Expect = 0.001
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 137 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           S  K +V IG  +L H AFSA QHRSY+R+T +E  +LP
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLP 42


>UniRef50_Q555V5 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 105

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = +1

Query: 247 VTMDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           V  DIV++ ++SLF   WG++N +  L  I A+  L    +++ +  P+F +FNHRGK L
Sbjct: 41  VPFDIVVECIISLFLFAWGIIN-SQFLIPIKASTHLAKKSFDSYDYRPNFTVFNHRGKYL 99

Query: 427 S 429
           +
Sbjct: 100 N 100



 Score = 42.7 bits (96), Expect = 0.007
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = +2

Query: 146 KVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPW 256
           K+  +IG     HT +SA QHR YLR+T Q F  +P+
Sbjct: 7   KIFCVIGISIFLHTVYSALQHRKYLRLTDQPFEGVPF 43


>UniRef50_Q17477 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 500

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 134 ASFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           ++ +++I I+  LSL H A+SA QHR YLR+T Q F  LP
Sbjct: 3   STIYRLITIVSLLSLLHCAYSAAQHRFYLRLTEQPFINLP 42


>UniRef50_Q6PV99 Cluster: Gonadotropin I beta subunit; n=3;
           Acipenser|Rep: Gonadotropin I beta subunit - Acipenser
           schrenckii (Amur sturgeon)
          Length = 128

 Score = 36.3 bits (80), Expect = 0.63
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 255 GYCHPSCG-QSVCCHVGSVECGG*SSRNTSCC*IKCYQMGDTEQSSLILYLQ 407
           G CH SC  +++   +    CG   S NT+ C  +C    D  +SS+ LY Q
Sbjct: 16  GQCHASCALENITIGIEKDGCGNCVSVNTTSCAGRCLTQADVYKSSISLYTQ 67


>UniRef50_Q2HIM5 Cluster: At5g03345; n=7; Magnoliophyta|Rep:
           At5g03345 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 104

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +1

Query: 184 YSFLSYTTSI-IFEDHVTRVYHVTMDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNA 360
           YS + Y   + I E+  +R     ++++++ ++ L   MW  L   G    I   ++ N 
Sbjct: 20  YSTIQYRGLLKIMEEEFSRP---PINVILELIIGLALCMWAALTFPGKFLSIHPDSDENR 76

Query: 361 IKWETQNNLPSFYIFNHRGK 420
             +   N+   F IFNHRG+
Sbjct: 77  AVFLPDNS--DFMIFNHRGR 94


>UniRef50_Q59T81 Cluster: Potential transmembrane protein; n=2;
           Saccharomycetales|Rep: Potential transmembrane protein -
           Candida albicans (Yeast)
          Length = 633

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = +2

Query: 77  FITSCILFILSCY*SVHNMASFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLPW 256
           ++T  +L++L C  +  N   F  +IV+I      H + S  QHR+++  TS    +L  
Sbjct: 524 WLTKTLLYVLCCILTASNAVGFPNIIVLI------HRS-SPEQHRAFINGTSLSLNSLAR 576

Query: 257 ILSSKLW 277
            L   LW
Sbjct: 577 FLGPMLW 583


>UniRef50_UPI000155483C Cluster: PREDICTED: similar to keratin
           associated protein; n=8; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to keratin associated protein -
           Ornithorhynchus anatinus
          Length = 399

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECGG*SSRNTSCC*IKC 359
           C P+CG+  CC  GSV CG      +SCC   C
Sbjct: 83  CQPACGRDSCC--GSVCCGS-GPCQSSCCQPSC 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,322,418
Number of Sequences: 1657284
Number of extensions: 10735304
Number of successful extensions: 26654
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26596
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)