Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00267
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.5  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   8.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.6  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   8.6  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +1

Query: 157 DHWFSFVIPYSFLSYTTSIIFEDHVTR 237
           D+W  ++ P  + +YT     +D V++
Sbjct: 342 DYWNEYIPPILYYNYTVDRDLQDEVSQ 368


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +1

Query: 157 DHWFSFVIPYSFLSYTTSIIFEDHVTR 237
           D+W  ++ P  + +YT     +D V++
Sbjct: 342 DYWNEYIPPILYYNYTVDRDLQDEVSQ 368


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +1

Query: 157 DHWFSFVIPYSFLSYTTSIIFEDHVTRVY 243
           D ++  +  ++  S   ++   DH+TR+Y
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHITRIY 564


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +1

Query: 157 DHWFSFVIPYSFLSYTTSIIFEDHVTRVY 243
           D ++  +  ++  S   ++   DH+TR+Y
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHITRIY 564


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +1

Query: 157 DHWFSFVIPYSFLSYTTSIIFEDHVTRVY 243
           D ++  +  ++  S   ++   DH+TR+Y
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHITRIY 564


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +1

Query: 157 DHWFSFVIPYSFLSYTTSIIFEDHVTRVY 243
           D ++  +  ++  S   ++   DH+TR+Y
Sbjct: 536 DEYYETISNHTDASSAKAVKNSDHITRIY 564


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 355 NAIKWETQNNLPSFYIFNHRGKAL 426
           N++    + +LP F +  HR +A+
Sbjct: 22  NSVGVSNEVSLPQFKVLGHRQRAM 45


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 99  SF*VVIRVYITWLHFIKLL*SLVFFRY 179
           SF ++I  Y T LHF+  +  L FFR+
Sbjct: 203 SFLLIIS-YST-LHFVNYIDDLFFFRF 227


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 355 NAIKWETQNNLPSFYIFNHRGKAL 426
           N++   ++ +LP F +  HR +A+
Sbjct: 204 NSVGVSSEVSLPQFKVLGHRRRAV 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,306
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)