Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00267
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033588-1|AAH33588.1|  131|Homo sapiens transmembrane protein 3...    58   4e-08
AL953870-2|CAI41375.1|  131|Homo sapiens transmembrane protein 3...    58   4e-08
AL732579-1|CAI39920.2|  131|Homo sapiens transmembrane protein 3...    58   4e-08
AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated prot...    33   0.65 
BC117287-1|AAI17288.1|  174|Homo sapiens keratin associated prot...    31   4.6  
BC069560-1|AAH69560.1|  173|Homo sapiens KRTAP9-2 protein protein.     31   4.6  
AY360461-1|AAQ62965.1|  187|Homo sapiens UHS KERB-like protein p...    31   4.6  
AJ006692-1|CAA07188.1|  194|Homo sapiens ultra high sulfer kerat...    31   4.6  
AB126077-1|BAD20204.1|  187|Homo sapiens keratin associated prot...    31   4.6  
BC127252-1|AAI27253.1|  136|Homo sapiens keratin associated prot...    30   8.0  
BC103846-1|AAI03847.1|  127|Homo sapiens keratin associated prot...    30   8.0  
BC103845-1|AAI03846.1|  127|Homo sapiens keratin associated prot...    30   8.0  
BC028390-1|AAH28390.1|  668|Homo sapiens NALCN protein protein.        30   8.0  
AJ406942-1|CAC27581.1|  127|Homo sapiens keratin associated prot...    30   8.0  
AJ406934-1|CAC27573.1|  136|Homo sapiens keratin associated prot...    30   8.0  

>BC033588-1|AAH33588.1|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 40/58 (68%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           +DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 43  IDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 137 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           S  K +V IG  +L H AFSA QHRSY+R+T +E  +LP
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLP 42


>AL953870-2|CAI41375.1|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 40/58 (68%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           +DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 43  IDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 137 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           S  K +V IG  +L H AFSA QHRSY+R+T +E  +LP
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLP 42


>AL732579-1|CAI39920.2|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 40/58 (68%)
 Frame = +1

Query: 253 MDIVIQAVVSLFAVMWGVLNVAGNLREIPAAAELNAIKWETQNNLPSFYIFNHRGKAL 426
           +DIV+Q +++     +G++++AG  +++ A +EL    ++T  N PSFY+FNHRG+ L
Sbjct: 43  IDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = +2

Query: 137 SFHKVIVIIGFLSLFHTAFSATQHRSYLRITSQEFTTLP 253
           S  K +V IG  +L H AFSA QHRSY+R+T +E  +LP
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLP 42


>AJ406941-1|CAC27580.1|  191|Homo sapiens keratin associated protein
           4.9 protein.
          Length = 191

 Score = 33.5 bits (73), Expect = 0.65
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECGG*SSRNTSCC*IKCYQ 365
           C P C QSVCC      C   S   T+CC   CY+
Sbjct: 31  CRPQCCQSVCC---QPTCSRPSCCQTTCCRTTCYR 62


>BC117287-1|AAI17288.1|  174|Homo sapiens keratin associated protein
           9-2 protein.
          Length = 174

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECGG*SSRNTSCC*IKC 359
           C P+C  S CC  G   CG    +++SC  + C
Sbjct: 86  CQPTCCGSSCC--GQTSCGSSCGQSSSCAPVYC 116


>BC069560-1|AAH69560.1|  173|Homo sapiens KRTAP9-2 protein protein.
          Length = 173

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECGG*SSRNTSCC*IKC 359
           C P+C  S CC  G   CG    +++SC  + C
Sbjct: 85  CQPTCCGSSCC--GQTSCGSSCGQSSSCAPVYC 115


>AY360461-1|AAQ62965.1|  187|Homo sapiens UHS KERB-like protein
           protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECG-G*SSRNTSCC*IKCYQ 365
           C P C QS CC   S   G G S   +SCC   C Q
Sbjct: 110 CKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQ 145


>AJ006692-1|CAA07188.1|  194|Homo sapiens ultra high sulfer keratin
           protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECG-G*SSRNTSCC*IKCYQ 365
           C P C QS CC   S   G G S   +SCC   C Q
Sbjct: 117 CKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQ 152


>AB126077-1|BAD20204.1|  187|Homo sapiens keratin associated protein
           protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECG-G*SSRNTSCC*IKCYQ 365
           C P C QS CC   S   G G S   +SCC   C Q
Sbjct: 110 CKPCCSQSSCCKPCSCSSGCGSSCCQSSCCKPCCSQ 145


>BC127252-1|AAI27253.1|  136|Homo sapiens keratin associated protein
           4-2 protein.
          Length = 136

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECGG*SSRNTSCC*IKC 359
           C P C QSVCC      C   S   T+CC   C
Sbjct: 46  CRPQCCQSVCC---QPTCCSPSCCQTTCCRTTC 75


>BC103846-1|AAI03847.1|  127|Homo sapiens keratin associated protein
           4-10 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSV--ECGG*SSRNTSCC*IKC 359
           C PSC Q+ CC    V   C   S   T+CC   C
Sbjct: 25  CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQTTC 59


>BC103845-1|AAI03846.1|  127|Homo sapiens keratin associated protein
           4-10 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSV--ECGG*SSRNTSCC*IKC 359
           C PSC Q+ CC    V   C   S   T+CC   C
Sbjct: 25  CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQTTC 59


>BC028390-1|AAH28390.1|  668|Homo sapiens NALCN protein protein.
          Length = 668

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +2

Query: 221 RITSQEFTTLPWILSSKLWSVCLLSCGEC*MWRVIFAKYQLLLN 352
           R+T Q  TT P + SS+L+S   L  G C  W  I     L  N
Sbjct: 623 RLTHQALTTPPGMRSSQLFSKISLLLGICVAWESILGSLSLSHN 666


>AJ406942-1|CAC27581.1|  127|Homo sapiens keratin associated protein
           4.10 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSV--ECGG*SSRNTSCC*IKC 359
           C PSC Q+ CC    V   C   S   T+CC   C
Sbjct: 25  CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQTTC 59


>AJ406934-1|CAC27573.1|  136|Homo sapiens keratin associated protein
           4.2 protein.
          Length = 136

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +3

Query: 261 CHPSCGQSVCCHVGSVECGG*SSRNTSCC*IKC 359
           C P C QSVCC      C   S   T+CC   C
Sbjct: 46  CRPQCCQSVCC---QPTCCSPSCCQTTCCRTTC 75


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,288,276
Number of Sequences: 237096
Number of extensions: 1640672
Number of successful extensions: 4028
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3911
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)