Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00266
(769 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 24 1.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 2.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.2
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 9.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.5
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 9.5
>U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor
protein.
Length = 129
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 274 DRGKLTGQAYGTRVLGPGGDSTSYGG 351
D+ +TG AYG + PG S + G
Sbjct: 66 DKNGMTGDAYGGLNIRPGQPSRQHAG 91
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 379 WRSHWPSLDDHRNWY 335
W +H P+ D NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/53 (22%), Positives = 20/53 (37%)
Frame = +1
Query: 448 WDLGKNTHLSAGGWSLRSSVKKA*CRFTGPDYSRVVLPTALSKQLYKCRLDKH 606
W G N S + + CR +GP +V + + + CR + H
Sbjct: 690 WLPGINNQTSTREYPRIMDLDNVMCRTSGPRGVAIVSASTARSEQFLCRYEAH 742
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 130 KVSPTPSRYSRLCHLGQGNGGREGLRDFGRERPRTF 237
+ S SRY L H + + +G R R+R R +
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRSREY 261
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 26 YSKVLLSAAFLVCVNAQVSMPP 91
+++ LLSA++LVC V P
Sbjct: 207 FNRGLLSASYLVCYGIWVYFVP 228
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYI 116
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNF 651
NY+ N+Y +YKN+
Sbjct: 328 NYKYNYNNYNKKLYYKNY 345
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNFI 633
NY N+Y ++ K ++ N+I
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYI 349
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = -3
Query: 704 NYRTQINSYKSIDFYKNFFRQNF 636
NY N+Y + + Y N + N+
Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNY 348
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 26 YSKVLLSAAFLVCVNAQVSMPP 91
+++ LLSA++LVC V P
Sbjct: 83 FNRGLLSASYLVCYGIWVYFVP 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,190
Number of Sequences: 438
Number of extensions: 4249
Number of successful extensions: 25
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -