Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00265
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    46   3e-07
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.0  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 46.0 bits (104), Expect = 3e-07
 Identities = 23/67 (34%), Positives = 42/67 (62%)
 Frame = +2

Query: 290 LYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHIA 469
           +Y + ++V ++Q  TF+ L  L+ +HL +N+++ L+   F  L +LK L L+ N I+ IA
Sbjct: 97  VYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIA 156

Query: 470 NISFLSL 490
             +F +L
Sbjct: 157 YETFQNL 163



 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 20/67 (29%), Positives = 36/67 (53%)
 Frame = +2

Query: 281 MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLIS 460
           ++  +  +S+V +  +     LN L+ L L NN+L+ +    F  L +LK++ LQ+N I 
Sbjct: 20  LKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIE 79

Query: 461 HIANISF 481
            I   +F
Sbjct: 80  MIHRGTF 86



 Score = 33.1 bits (72), Expect = 0.002
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +2

Query: 290 LYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHIA 469
           LY+ ++ + +     F  +  LQ+L L +N L EL    F+    L+ L   +N IS I 
Sbjct: 253 LYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIP 312

Query: 470 NISF 481
           N  F
Sbjct: 313 NDLF 316



 Score = 30.7 bits (66), Expect = 0.013
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +2

Query: 269 GRQKMRTLYVNNSNVDSIQNRTFSGLN-SLQILHLGNNKLKELKGYEFQQLNNLKELFLQ 445
           G Q ++ L ++ +N+ S+  + F  +  SL  L+LG+NKL       F  + +L+ L L 
Sbjct: 221 GLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLS 280

Query: 446 NNLISHIANISFLSLK 493
           +N +  +   +F + K
Sbjct: 281 HNSLYELDFDTFRNTK 296



 Score = 28.3 bits (60), Expect = 0.070
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = +2

Query: 230 WQ*YSGIADHVFIGRQK-MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNK--LKELKG 400
           W   S ++    + R K +  L ++ + +  I   TF G+  L  L+LG+N     E+ G
Sbjct: 378 WNSISSLSHGGQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEING 437

Query: 401 YEFQQLN-NLKELFLQNNLISHIANIS 478
             FQ L   L  L L N  +S +  +S
Sbjct: 438 LSFQGLEYTLLHLNLDNVSLSQVPALS 464



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 438 SYKTI*SVISQTYHFYLLSPRVVTLDGNRLVDFGVWSFSNNINLKALSLGNN 593
           S+  I SV  Q +    LS   + L  N+L++     F N  +L+ L L +N
Sbjct: 231 SFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHN 282


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = -3

Query: 249 IPEYYCHLKTLLLHPWVFSVVFPLKIAPNNRQHLCSTMDRGSRCNC 112
           + +Y+C+ K   +     S V     +P     +C+T+  G +C C
Sbjct: 319 VNDYHCNCKLGFMGRHCESKVNFCATSPCQNGGVCTTIHAGHKCTC 364


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 247 NCRSRVYRKTEDENTVC 297
           +CRS  +R   DE  VC
Sbjct: 388 SCRSSTFRNNRDEYNVC 404


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 343 TRESSVLNAIYVTIINIQCSH 281
           T +S+ + AIYV +INI  S+
Sbjct: 369 TMDSNDMTAIYVLLINIFASY 389


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 343 TRESSVLNAIYVTIINIQCSH 281
           T +S+ + AIYV +INI  S+
Sbjct: 369 TMDSNDMTAIYVLLINIFASY 389


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 343 TRESSVLNAIYVTIINIQCSH 281
           T +S+ + AIYV +INI  S+
Sbjct: 369 TMDSNDMTAIYVLLINIFASY 389


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 343 TRESSVLNAIYVTIINIQCSH 281
           T +S+ + AIYV +INI  S+
Sbjct: 369 TMDSNDMTAIYVLLINIFASY 389


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +3

Query: 69  CCDYDACDCEMTC 107
           CC  D+C  + +C
Sbjct: 110 CCSQDSCHADKSC 122


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 594 LWSCKCRYLQELTAFLAENAQKII 665
           LW   CR +   +  LAE+ Q ++
Sbjct: 175 LWYINCRAVGNASTALAESFQNVL 198


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 594 LWSCKCRYLQELTAFLAENAQKII 665
           LW   CR +   +  LAE+ Q ++
Sbjct: 175 LWYINCRAVGNASTALAESFQNVL 198


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
 Frame = +3

Query: 30  LCKYETHCFAICHCCDYDACDCEMTCPHNCTCYHD--PLWNT---NVVDCSGQSSMEIPQ 194
           LC Y  +C  I   C Y  C   +  P +  C     PL +T   NVV    + SM I  
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFPERSMGITP 342

Query: 195 KIPMDATEVFL 227
            I      +F+
Sbjct: 343 MIWNSTRRLFV 353


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 6   TNLKTTDFLCKYETHCFAICHCCDY 80
           TN    + +    TH F +   CDY
Sbjct: 260 TNGDLDELIVTLSTHYFPVFSACDY 284


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 594 LWSCKCRYLQELTAFLAENAQKII 665
           LW   CR +   +  LAE+ Q ++
Sbjct: 175 LWYINCRAVGNASTALAESFQNVL 198


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 417 NCWNSYPFNS 388
           NC+N+YP+ S
Sbjct: 251 NCYNNYPYYS 260


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 162 NRQHLCSTMDRGS 124
           NRQ++C   D GS
Sbjct: 69  NRQYVCKAKDEGS 81


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 162 NRQHLCSTMDRGS 124
           NRQ++C   D GS
Sbjct: 69  NRQYVCKAKDEGS 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,818
Number of Sequences: 336
Number of extensions: 3927
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)