Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00265
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 45 8e-05
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 41 0.001
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 41 0.001
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 40 0.002
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 40 0.003
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 38 0.007
SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06) 38 0.007
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 38 0.009
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 37 0.020
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 36 0.027
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 35 0.062
SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32) 34 0.11
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 33 0.25
SB_30318| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-07) 33 0.25
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 31 1.3
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_9671| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 30 1.8
SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 30 2.3
SB_4955| Best HMM Match : rve (HMM E-Value=7.5e-09) 29 3.1
SB_24925| Best HMM Match : Glyco_hydro_35 (HMM E-Value=0) 29 4.1
SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39) 29 4.1
SB_8830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 29 5.4
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_13393| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 28 9.4
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 49.2 bits (112), Expect = 4e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +2
Query: 242 SGIADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLN 421
S + + F G ++ L+++ + + +I TF GL +LQ L L NN LK Q
Sbjct: 129 SSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLRLHNNNLKTFSERTLQGTL 188
Query: 422 NLKELFLQNNLISHIANISFLSLK 493
+LK L L NNL++ I +F +L+
Sbjct: 189 SLKSLQLNNNLLTRIEPGTFRNLR 212
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 248 IADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNL 427
I + F G ++ L ++N+N+ + RT G SL+ L L NN L ++ F+ L L
Sbjct: 155 IPETTFHGLAALQRLRLHNNNLKTFSERTLQGTLSLKSLQLNNNLLTRIEPGTFRNLRGL 214
Query: 428 KELFLQNNLISHI 466
+ L+L NN I+ +
Sbjct: 215 EILYLNNNNITEL 227
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +2
Query: 269 GRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQN 448
G +++L +NN+ + I+ TF L L+IL+L NN + EL F + +LK LF+
Sbjct: 186 GTLSLKSLQLNNNLLTRIEPGTFRNLRGLEILYLNNNNITELDQRLFTRTPSLKLLFVSF 245
Query: 449 NLISHIANISFLSL 490
N ++ + F SL
Sbjct: 246 NSLATLPRGLFYSL 259
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +2
Query: 260 VFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELF 439
VF +R+L ++ + + S+ TF GL+SLQ L L N+L+ + F L L+ L
Sbjct: 111 VFRDLASLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAALQRLR 170
Query: 440 LQNN 451
L NN
Sbjct: 171 LHNN 174
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 242 SGIADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLN 421
S I + F +R+L + + + + F L SL+ L L N+L L F+ L+
Sbjct: 81 STIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLPEDTFEGLS 140
Query: 422 NLKELFLQNNLISHIANISFLSL 490
+L++LFL N + I +F L
Sbjct: 141 SLQDLFLDFNRLRAIPETTFHGL 163
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 281 MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNN 451
+ LY+NN+N+ + R F+ SL++L + N L L F L+ ++ L NN
Sbjct: 214 LEILYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAKVSLHNN 270
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +2
Query: 263 FIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFL 442
F G+ K++ L + + + IQ+ TF L +L++L+L NN++ + F L +L+ L L
Sbjct: 128 FWGQNKLQQLNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDL 187
Query: 443 QNNLIS 460
NN IS
Sbjct: 188 SNNDIS 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +2
Query: 239 YSGIADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQL 418
++ I F + L ++ + + +I+ F G N LQ L+L N+L ++ F+ L
Sbjct: 97 FTSILASAFNRLSSLEVLKLSKNRISTIRG-AFWGQNKLQQLNLERNRLSHIQDTTFKHL 155
Query: 419 NNLKELFLQNNLISHIANISFLSLK 493
LK L L NN I HI+ SF L+
Sbjct: 156 LALKVLNLANNRIYHISQGSFSDLR 180
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 456 SVISQTYHFYLLSPRVVTLDGNRLVDFGVWSFSNNINLKALSLGNN 593
S I T +LL+ +V+ L NR+ SFS+ +L+ L L NN
Sbjct: 145 SHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNN 190
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 150 NVVDCSGQSSMEIPQKIPMDATEVFLDGNNIREL 251
N V+C G+ IP IP D T + L NNI +L
Sbjct: 43 NRVNCEGKHLTAIPVGIPSDITALNLGYNNIVDL 76
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +3
Query: 105 CPHNCTCYHDPLWNTNVVDCSGQSSMEIPQKIPMDATEVFLDGNNIREL 251
CP CTC + T +VDCS + +P K+P EV L GN IREL
Sbjct: 484 CPRECTCAVREIDQTVLVDCSERGLHRLPFKMPAGELEVNLRGNAIREL 532
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +2
Query: 242 SGIADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLN 421
S I D F + ++ L + + + ++ F GL SL+ L L N LK L F+ L
Sbjct: 106 SDIQDGTFENLRYLKQLNLGENKIRTVSASMFKGLVSLEKLDLRFNDLKALPRGVFKPLK 165
Query: 422 NLKELFLQNN 451
+L+ELFL +N
Sbjct: 166 SLRELFLHDN 175
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +2
Query: 248 IADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNL 427
I F + L V+ + + + + L L++LH+ NN L + + +++ L
Sbjct: 206 ITQGTFGSLMSLEFLDVSFNEIRHFDEESLACLPLLEVLHINNNSLTTVPLHALRKVKFL 265
Query: 428 KELFLQNNLISHIANISF 481
KEL L NLIS++++ +F
Sbjct: 266 KELDLSANLISYVSSTAF 283
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 260 VFIGRQKMRTLYVN-NSNVDS-IQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKE 433
VF + +R L+++ N N+ S I+ F+GL++L+ LH+ +K++ F L +L+
Sbjct: 160 VFKPLKSLRELFLHDNRNMGSRIEEGAFNGLDNLRKLHVSATGMKKITQGTFGSLMSLEF 219
Query: 434 LFLQNNLISHIANISFLSL 490
L + N I H S L
Sbjct: 220 LDVSFNEIRHFDEESLACL 238
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +2
Query: 278 KMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLI 457
K++ +Y+ N+ + +I+N F LN L+++ L NNK+ + + L NL L L NN +
Sbjct: 352 KVQVMYLKNNKIVAIENGAFP-LN-LRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQL 409
Query: 458 SHIAN 472
+ + N
Sbjct: 410 TILPN 414
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 281 MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKEL-KGYEFQQLNNLKELFLQNNLI 457
+R + ++N+ + I L +L L L NN+L L G +F + L L+NN +
Sbjct: 375 LRVMDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQLTILPNGGDFHN-KQIDRLDLKNNRL 433
Query: 458 SHIANISFLSL 490
+ IA +F+++
Sbjct: 434 TTIAPNTFVNI 444
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 320 IQNRTFSGLNSLQILHLGNNKLKELKGY 403
+ F GL++L+ LHL NN++ L Y
Sbjct: 264 VMYNAFKGLSALEDLHLENNQINSLTSY 291
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2
Query: 263 FIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFL 442
F G ++ L V N+ ++ I+N TF L L+LG NKL+ + + L +L+ L L
Sbjct: 80 FAGYPYLKWLSVENNFMEVIENGTFLRQALLDELYLGYNKLERITRGTLEGLRDLQRLRL 139
Query: 443 QNNLISHIANISFLSL 490
N I+ + +F SL
Sbjct: 140 SKNTITRLYKGAFESL 155
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 263 FIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFL 442
F G +RTL++ + + + T L SL + + NK++E++ F +L NL L +
Sbjct: 176 FGGLFSLRTLFLGGNLIKFFSSSTLGNLPSLTLFDISFNKIEEIEEGSFLELPNLSTLHM 235
Query: 443 QNNLISHI 466
+ I I
Sbjct: 236 NDCKIRKI 243
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/68 (25%), Positives = 36/68 (52%)
Frame = +2
Query: 269 GRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQN 448
G + ++ L ++ + + + F L+ L +L L +N+++ + F L +L+ LFL
Sbjct: 130 GLRDLQRLRLSKNTITRLYKGAFESLHMLTVLELADNEIEFIDVGAFGGLFSLRTLFLGG 189
Query: 449 NLISHIAN 472
NLI ++
Sbjct: 190 NLIKFFSS 197
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 281 MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLIS 460
+ L + ++ ++ I F GL SL+ L LG N +K L +L + N I
Sbjct: 158 LTVLELADNEIEFIDVGAFGGLFSLRTLFLGGNLIKFFSSSTLGNLPSLTLFDISFNKIE 217
Query: 461 HIANISFLSL 490
I SFL L
Sbjct: 218 EIEEGSFLEL 227
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 248 IADHVFIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKG 400
I + VF G ++ L + +++++ I N + SGL SL L+L NNKL++ G
Sbjct: 41 IPEFVFRGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNLANNKLRKWNG 91
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 263 FIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFL 442
F+G +RTL + + + I+ F L +L+ L+L N+ + F++L L+ L L
Sbjct: 131 FLGLNNIRTLNLRRNGIKEIEFGAFRNLTALESLYLFRNRFFGIGPNAFERLTALQVLSL 190
Query: 443 QNNLISHIANISFLSLK 493
+N ++ + F LK
Sbjct: 191 VDNRLTGLTRSMFSGLK 207
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +2
Query: 287 TLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNN 451
TL +N++ + ++ F GLN+++ L+L N +KE++ F+ L L+ L+L N
Sbjct: 115 TLLLNDNRLSLLRYDFFLGLNNIRTLNLRRNGIKEIEFGAFRNLTALESLYLFRN 169
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 281 MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKE 433
+ +LY+ + I F L +LQ+L L +N+L L F L +L+E
Sbjct: 161 LESLYLFRNRFFGIGPNAFERLTALQVLSLVDNRLTGLTRSMFSGLKSLRE 211
>SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06)
Length = 298
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/66 (28%), Positives = 40/66 (60%)
Frame = +2
Query: 269 GRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQN 448
G +++ LY++N+ +DSI F L SL+ +G+N++K++ FQ ++N +L +
Sbjct: 143 GLRRLTILYLSNNFLDSIPGGCFLDLKSLKHFFVGDNQIKKVADDVFQNVSNGFKLDIGR 202
Query: 449 NLISHI 466
N ++ +
Sbjct: 203 NKMNGV 208
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +3
Query: 105 CPHNCTCYHDPLWNTNVVDCSGQSSMEIPQKIPMDATEVFLDGNNIREL 251
CP C+CY TN C G+ P ++ E+ L N ++ L
Sbjct: 5 CPQKCSCYTRSWLITN---CRGKYLTSFPDQVDNTTVELILTYNRLKAL 50
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +2
Query: 263 FIGRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFL 442
F+ K+R LY+ N+ + I T + L + L N LK + + F L +LK + L
Sbjct: 67 FLDLTKLRGLYLTNNKISPIFEGTITTCVRLMTVDLSRNLLKRVFKHYFSGLEDLKSVNL 126
Query: 443 QNNLISHIANISFLSLK 493
N+I + +F K
Sbjct: 127 SRNVIECVEREAFEGCK 143
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 287 TLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHI 466
TL V + + ++ +F L L+ L+L NNK+ + L + L NL+ +
Sbjct: 51 TLIVEDGQITELKKTSFLDLTKLRGLYLTNNKISPIFEGTITTCVRLMTVDLSRNLLKRV 110
Query: 467 ANISFLSLK 493
F L+
Sbjct: 111 FKHYFSGLE 119
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 36.7 bits (81), Expect = 0.020
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 269 GRQKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQ- 445
G Q + L ++++N+ S+ + L +L L+L N ++EL Y+F L NLK LF
Sbjct: 240 GIQSLEILNISSNNITSLSDE-IRLLRNLVELNLNKNNIQELP-YDFHLLKNLKTLFFSA 297
Query: 446 NNL 454
NNL
Sbjct: 298 NNL 300
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 338 SGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLI 457
S L+SL++L L N ++EL ++L NLKELFL N I
Sbjct: 170 SKLSSLEVLILSGNSIRELPD-SIKELVNLKELFLGRNKI 208
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 275 QKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNL 454
+ + LY+ ++N+ I+N F+G +L L+L NNK+ ++G + L +L+L N
Sbjct: 51 KNLSVLYLYDNNISKIKNLGFAG--NLTHLYLQNNKISRIEGLD--HCRRLSKLYLGGNS 106
Query: 455 ISHIANISFL 484
I+ I + L
Sbjct: 107 ITVIEGLDKL 116
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 275 QKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNL 454
+ + L V +SN+ +I F+G +L+ L L N + ++ F LN L+ L + +N
Sbjct: 68 ENITELTVASSNISTITGGVFAGFTALRNLSLTFNNIHTIRARGFAGLNKLEYLNMSDNR 127
Query: 455 IS 460
IS
Sbjct: 128 IS 129
>SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32)
Length = 1206
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 296 VNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKEL 436
+ N+ + I + F+ + LQ+L+L NN++ + F L NLK+L
Sbjct: 1120 IGNNLIKDIPSGVFANVRDLQVLNLHNNEITTIDEDTFTDLTNLKKL 1166
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/56 (23%), Positives = 22/56 (39%)
Frame = +3
Query: 105 CPHNCTCYHDPLWNTNVVDCSGQSSMEIPQKIPMDATEVFLDGNNIRELQITCLSE 272
CP +C+C + + GQ IP+ +P+D + N I + E
Sbjct: 960 CPSSCSCVYTSGSGPRRILVKGQELTAIPKTMPLDTFALMFSSNRITNVDSRSFKE 1015
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 368 LGNNKLKELKGYEFQQLNNLKELFLQNNLISHIANISFLSL 490
+GNN +K++ F + +L+ L L NN I+ I +F L
Sbjct: 1120 IGNNLIKDIPSGVFANVRDLQVLNLHNNEITTIDEDTFTDL 1160
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 287 TLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHI 466
TL +N N+ I + L L+ L+L N L L F++L NLK L L+NN I+ +
Sbjct: 21 TLDLNRKNLIEIPPKVLD-LQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHINEV 79
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 6 TNLKTTDFLCKYETHCFAICHCCDYDACDCEMTCPHNCTCY 128
T TT +C+ C+C Y C C C + C CY
Sbjct: 455 TTTTTTTTTAPVLRYCYCYCYCYYYCYCYCYYYCYYYCYCY 495
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 33 CKYETHCFAICHCCDYDACDCEMTCPHNCTCYH 131
C Y +C+ +C Y C C C + C CY+
Sbjct: 476 CYYYCYCYCYYYCYYYCYCYCYYCC-YYCYCYY 507
>SB_30318| Best HMM Match : 7tm_1 (HMM E-Value=3.9e-07)
Length = 546
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = +2
Query: 293 YVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNN 451
Y++++++ I F GL L++L + +NKLK +G + L L++L + N
Sbjct: 85 YLDHNHITKIARAAFEGLVRLRLLDVRHNKLKTWQGVLSKNLPALQQLHVWGN 137
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 347 NSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHIANISFL 484
++L L+L +N + +++G Q L NL+ L L +N ISHI ++ L
Sbjct: 34 SNLVTLNLHSNHISKIEG--LQHLQNLRHLDLSSNQISHIEGLTSL 77
>SB_56937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 24 DFLCKYETHCFAICHCCDYDACDCEMTCPHNCTCYHDPLW 143
D C Y+ C C ++TCP+N TC +D W
Sbjct: 570 DIKCPYDITCLYHITCPYGITYPYDITCPYNITCPYDITW 609
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 33 CKYETHC-FAICHCCDYD-ACDCEMTCPHNCTCYHD 134
C Y C F I C YD C ++TCP++ TC +D
Sbjct: 633 CPYGITCQFGIT--CPYDITCPYDITCPYDITCPYD 666
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 12 LKTTDFLCKYE-THCFAICHCCDYD-ACDCEMTCPHNCTCYH 131
++T D C Y+ T+ + I C YD C ++ CP++ TC +
Sbjct: 446 VRTKDITCPYDFTYPYHIT--CPYDITCPYDIKCPYDITCLY 485
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 24 DFLCKYETHCFAICHCCDYDAC-DCEMTCPHNCTCYHDPLW 143
D C Y C C YD ++TCP++ TC +D W
Sbjct: 696 DITCPYHITC-PYHITCPYDITYPYDITCPYHITCPYDITW 735
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 24 DFLCKYETHCFAICHCCDYDACDCEMTCPHNCTCYHD 134
D C Y C C C +TCP++ TC +D
Sbjct: 618 DITCPYGITCLYGITCPYGITCQFGITCPYDITCPYD 654
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 24 DFLCKYETHCFAICHCCDYDAC-DCEMTCPHNCTCYHD 134
D C Y+ C C YD ++TCP++ TC +D
Sbjct: 504 DITCPYDITC-PYYITCPYDITYPYDITCPYDITCPYD 540
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 24 DFLCKYE-THCFAICHCCDYDACDCEMTCPHNCTCYHD 134
D C Y+ T+ + I + D C +TCP++ TC +D
Sbjct: 534 DITCPYDITYPYDITYPYDI-TCPYHITCPYDITCPYD 570
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +2
Query: 281 MRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLIS 460
++ L + ++ +QN L L L + + LKEL G + + NLK+++ +N IS
Sbjct: 18 LQVLTLIGQEIEVLQN--LDCLPHLTELCVSESSLKELSGID--KCTNLKKVYFYDNHIS 73
Query: 461 HIANISFLS 487
I N+S L+
Sbjct: 74 KIENLSSLT 82
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 278 KMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNN 451
K++ L ++++N+ + L L+ L L NN + LKG Q NN+ L + NN
Sbjct: 1095 KLKWLNLSSNNLTILDTGMLERLPELRYLSLENNNITCLKG--LQVNNNITSLDVNNN 1150
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 284 RTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQ-NNLIS 460
R L ++N+ + S+ L SLQ+L + NNKLK L L++L+ L +Q NNL S
Sbjct: 67 RILVLSNNRLTSLP-ADLDELRSLQVLDVANNKLKSLP-KAIGGLSSLQTLDVQGNNLQS 124
Query: 461 HIANISFLSL 490
I L L
Sbjct: 125 LPLEIGNLKL 134
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 275 QKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYE-FQQLNNLKELFLQNN 451
++++T+ +NN+ V + L +L+ + L NN ++ELK E + + +L+ L +Q +
Sbjct: 554 KRLKTILLNNNRVCRVAEGLGECLPNLESIILTNNAMQELKDLEPLESVKSLRYLRIQGH 613
>SB_9671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +3
Query: 33 CKYETHCFAI---CHCCDYDACDCEMTCP 110
C +E+HC A+ C DC MTCP
Sbjct: 104 CVWESHCHALTCTARICHQICSDCSMTCP 132
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 105 CPHNCTCYHDPLWNTNVVDCSGQSSMEIPQKIPMDATEVFLDGNNIREL 251
CP C C L ++CS + +P IP++ TE++ I L
Sbjct: 96 CPSVCQCGERSL--VKYIECSRANFTVLPNDIPVETTELYFSRTQISNL 142
>SB_7990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 540 VWSFSNNINLKALSLGNNLWSCK 608
+W FS N+NL AL G SCK
Sbjct: 217 IWCFSTNVNLTALRHGEKRQSCK 239
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +2
Query: 344 LNSLQILHLGNNKLKELKGYEFQQLNNLKELFL-QNNLIS--HIANISFLSLK 493
LN ++I L NN L EL L L+EL + NNL+S ++N+SF+SL+
Sbjct: 342 LNLVRI-DLANNSLHELPEELLNTLPLLEELDVSNNNLVSLPEVSNLSFMSLE 393
>SB_4955| Best HMM Match : rve (HMM E-Value=7.5e-09)
Length = 667
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -1
Query: 488 EIKMICLRYD*LDCFVRIVLLGYSTVGIRILLIL*VYCYPSAVFVTSSNQRK 333
+I M+ + YD + +V++GY G +I++++ Y P + N+R+
Sbjct: 110 KIIMVMMSYDIPGPKIIMVMMGYDVPGPKIIMVMMSYDVPGPKIIMEENKRE 161
>SB_24925| Best HMM Match : Glyco_hydro_35 (HMM E-Value=0)
Length = 555
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 314 DSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKE 433
D +Q F+GLN++Q N E+ Y+F+ N+L+E
Sbjct: 62 DRLQKMKFAGLNAVQTYVAWNLHEPEIGTYDFEGENDLEE 101
>SB_52582| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-39)
Length = 587
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 296 VNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHIANI 475
+ + + + + TF G+ SL+ L L N L QQ ++ L+L+ N H+ +
Sbjct: 13 LEGNRITEVNDNTFKGVKSLETLDLSENLFVRLPSAGMQQ---IRRLYLRGN--RHLKEL 67
Query: 476 SFLSL 490
S L
Sbjct: 68 SVQDL 72
>SB_8830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 254 DHVFIGRQKMRTLYVNNSNVDSIQN--RTFSGLNSLQILHLGNN-KLKELKGYEFQQLN 421
D +FIG+ + LY VDS++N F L ++Q + NN + KE++ ++ N
Sbjct: 75 DDLFIGKVSIVGLYKGKIKVDSLKNSFEFFQELGTMQNMVTNNNDETKEIQDSQYTTQN 133
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 290 LYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLIS 460
LY+ + + + ++ F+G + L +L L +N L + + L +L+ L L NN IS
Sbjct: 108 LYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIP-EDIIILRDLERLDLTNNDIS 163
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 344 LNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHI 466
L LQ+L+L N + Y F L L EL+L+N+ + +
Sbjct: 74 LTQLQVLNLSGNHITNFP-YRFFMLRFLTELYLRNDFLEFL 113
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 275 QKMRTLYVNNSNVDSIQNRTFSGLNSLQILHLGNNKLKELKGYEFQQLNNLKE 433
+ +R LY++++ + S+ + L L IL + NN L G E + + + K+
Sbjct: 213 ENLRELYLDDNRLMSLPKKLHEFLTGLYILDINNNAGNLLLGLENENVQDHKK 265
>SB_19618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 344 LNSLQILHLGNNKLKELKGYEFQQLNNLKELFLQNNLISHIANISFL 484
L+ L IL L NKL G L NL+EL+L N I + + L
Sbjct: 455 LSRLAILELRGNKLMTTTG---MNLENLRELYLAANTIRKVEGLDRL 498
>SB_13393| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 163
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 30 LCKYETHCFAICHCCDYD-ACDCEMTCPHNCTC 125
LC+ T C+ + CCD CD + C + C
Sbjct: 40 LCRDMTLCYNLTLCCDLTLCCDLTLCCDMSLCC 72
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,541,296
Number of Sequences: 59808
Number of extensions: 482660
Number of successful extensions: 1839
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1829
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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