Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00264
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811; ...    36   1.0  
UniRef50_UPI0000DD8177 Cluster: PREDICTED: hypothetical protein;...    33   5.6  
UniRef50_UPI00006A1E4F Cluster: UPI00006A1E4F related cluster; n...    33   5.6  
UniRef50_UPI0000D9E51C Cluster: PREDICTED: hypothetical protein;...    33   9.7  
UniRef50_UPI0000DC0FF9 Cluster: UPI0000DC0FF9 related cluster; n...    33   9.7  
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ...    33   9.7  
UniRef50_A6NNQ8 Cluster: Uncharacterized protein ENSP00000371436...    33   9.7  

>UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811;
           n=3; Homo sapiens|Rep: CDNA FLJ45698 fis, clone
           FEBRA2017811 - Homo sapiens (Human)
          Length = 415

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 381 YIHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCH 259
           +IH   +     ++H  TY  RH  T  +  KYIY   H H
Sbjct: 24  HIHSHIHTFTCTHIHRRTYTHRHTHTLMHTNKYIYTHMHIH 64


>UniRef50_UPI0000DD8177 Cluster: PREDICTED: hypothetical protein;
           n=3; Tetrapoda|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 498

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -3

Query: 384 LYIHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCHLTFGLPITIYLYI 220
           +Y H   Y +  +Y H H Y   H  T  +I   I++ +H H+   +   ++++I
Sbjct: 172 IYTHVHIYTLIHIYTHVHDYTHIHIYTHIHIYTLIHIYTHIHIYTHIHAYVHIHI 226



 Score = 32.7 bits (71), Expect = 9.7
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = -3

Query: 384 LYIHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCHLTFGLPITIYLYI 220
           +Y H   Y +  +Y H H Y   H  T  +   +I++ +H H+   +   ++++I
Sbjct: 226 IYTHIHIYTLIHIYTHIHAYTHIHIYTHIHAYTHIHIYTHIHIYTYIHAYVHIHI 280


>UniRef50_UPI00006A1E4F Cluster: UPI00006A1E4F related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A1E4F UniRef100 entry -
           Xenopus tropicalis
          Length = 185

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -3

Query: 381 YIHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCHLTFGLPITIYLYI 220
           + H   YI +  Y H +TY   H P   YI +Y +  +H H+T    +++++YI
Sbjct: 75  HTHTPIYIYR--YTHTYTYIDTHTPI--YIYRYTH--THIHITCNTYLSLFVYI 122


>UniRef50_UPI0000D9E51C Cluster: PREDICTED: hypothetical protein;
           n=2; Eutheria|Rep: PREDICTED: hypothetical protein -
           Macaca mulatta
          Length = 589

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -3

Query: 384 LYIHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCHLTFGLPITIYLYI 220
           +YIH   YI   +++H H Y         YI  YI++  H H+   + I I+++I
Sbjct: 353 IYIHIHVYIHIHIHIHIHIYIHIQS-IRVYILIYIHIYIHIHVYIHIHIHIHIHI 406


>UniRef50_UPI0000DC0FF9 Cluster: UPI0000DC0FF9 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC0FF9 UniRef100 entry -
           Rattus norvegicus
          Length = 177

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 345 YVHNHTYRQRHPPTGAYITKYIYV*SHCH 259
           Y+H HT+R  H  T  Y  KYIY   H H
Sbjct: 44  YMHKHTHRHTHTYTDTY--KYIYTYKHTH 70


>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
           n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
           UTERU3011092 - Homo sapiens (Human)
          Length = 291

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = -3

Query: 384 LYIHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCHLTFGLPITIYLYI 220
           ++IH   YI   +Y H HTY   H    AYI  Y Y     H+   +   ++ Y+
Sbjct: 81  VHIHAYAYICIFIYTHMHTYMYIHMHAYAYIYVYSYTRICIHICIFICTHMHTYM 135


>UniRef50_A6NNQ8 Cluster: Uncharacterized protein ENSP00000371436;
           n=1; Homo sapiens|Rep: Uncharacterized protein
           ENSP00000371436 - Homo sapiens (Human)
          Length = 299

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 378 IHDKYYIIKSVYVHNHTYRQRHPPTGAYITKYIYV*SHCHLTFGLPITIYLY 223
           IH + Y      +H H YR  +  T A++ +YIY  +H H+   + I IY+Y
Sbjct: 223 IHARVYRYMYTRIHAHVYRYIY--THAHVYRYIY--THAHVYRYIYIYIYIY 270


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,624,132
Number of Sequences: 1657284
Number of extensions: 13578579
Number of successful extensions: 30266
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30057
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)