Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00264
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    26   0.43 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.2  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 406 YTMGNKYSIHSRQVLHH*KRVCTQPHLQTTTPTDRSLY 293
           +TMG+ +S H     HH       PH Q +TP   S Y
Sbjct: 417 HTMGHGHS-HIHATPHHHHSHAATPHHQHSTPLAHSSY 453


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 251 NVRWQWDYTYIYFVI 295
           N+   WDY YIY  +
Sbjct: 167 NITTPWDYYYIYHTL 181


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 251 NVRWQWDYTYIYFVI 295
           N+   WDY YIY  +
Sbjct: 182 NITTPWDYYYIYHTL 196


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 251 NVRWQWDYTYIYFVI 295
           N+   WDY YIY  +
Sbjct: 70  NITTPWDYYYIYHTL 84


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 300 AYITKYIYV*SHCHLTFGLPITIYLYI 220
           A+  + +Y  + CH TFG   T+ L+I
Sbjct: 253 AHYGEKVYKCTLCHETFGSKKTMELHI 279


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 361  HH*KRVCTQPHLQTTTPTDRSLYHKIYICIIPLPSNV 251
            HH  +V T   LQT   +  S+ H     +    SNV
Sbjct: 920  HHQIQVSTSAGLQTIRLSGHSVLHSAQSVVASSASNV 956


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,562
Number of Sequences: 438
Number of extensions: 4822
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)