Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00263
(689 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 43 0.008
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 43 0.008
UniRef50_UPI000051AC18 Cluster: PREDICTED: similar to CG2467-PA,... 33 5.0
UniRef50_A5DH64 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q7TU03 Cluster: Probable Beta-agarase [Precursor]; n=1;... 33 6.6
UniRef50_Q5WUU6 Cluster: Putative uncharacterized protein; n=4; ... 33 6.6
UniRef50_Q0LCB6 Cluster: Adenylyl cyclase class-3/4/guanylyl cyc... 33 6.6
UniRef50_Q0HHZ2 Cluster: DNA polymerase III, subunits gamma and ... 33 6.6
UniRef50_Q9AR07 Cluster: Jasmonate O-methyltransferase; n=8; cor... 33 6.6
UniRef50_A5BJN4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.7
UniRef50_Q6FLV8 Cluster: Similar to sp|P23255 Saccharomyces cere... 33 8.7
UniRef50_Q59MA9 Cluster: Potential translation initiation factor... 33 8.7
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 42.7 bits (96), Expect = 0.008
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +1
Query: 241 SLPFSDTFQVSALFDL*IWRELNGRKRPGSAPGIAEVHG 357
S F + + +S F +WR L+GR+R GSAPGIAEVHG
Sbjct: 947 STVFPERYDMS-FFKRGLWRVLSGRQRLGSAPGIAEVHG 984
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 284 SKRALTWKVSEKGREAAPEQLGVCSVEQELGVLGMTWEELEQTAQDRCKWKNLI 123
+++ALTW + R P+ +E ++ + W+ELE+ AQDR W+ L+
Sbjct: 927 TRQALTWNPERQRRRGRPKNTLRREIETDMRRMNKNWKELEKKAQDRVGWRKLV 980
>UniRef50_UPI000051AC18 Cluster: PREDICTED: similar to CG2467-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG2467-PA, isoform A - Apis mellifera
Length = 996
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 152 GQSVLTLPTSYPRPLAPAPPSKRQVVLGRP 241
G V+T+ YP P+APAPP+ +L P
Sbjct: 140 GDEVITIVCRYPPPMAPAPPAPPASILATP 169
>UniRef50_A5DH64 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 290
Score = 33.5 bits (73), Expect = 5.0
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 439 FFYLDLSYIITAFSLPSHILVKDATPTHIIFIHLYYYCKKT 561
FF + + + TAFSLP+ +L+K+ P +I HL+Y+ T
Sbjct: 165 FFMIIVHKVPTAFSLPT-LLLKENVPVNIAKTHLFYFSLMT 204
>UniRef50_Q7TU03 Cluster: Probable Beta-agarase [Precursor]; n=1;
Pirellula sp.|Rep: Probable Beta-agarase [Precursor] -
Rhodopirellula baltica
Length = 811
Score = 33.1 bits (72), Expect = 6.6
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 193 PSSCSTEQTPSCSGAASLPFSDTFQVSALFDL*-IWRELNGRKRPGSAPGIAEVH-GLSS 366
P+S + P+ +A P +D FQ + + D +WR+ +GR+ P + +AEV ++
Sbjct: 547 PTSGNVAFVPTEGASARGPLAD-FQPTPVADFFELWRDFDGRRLPVATNDLAEVGLNATA 605
Query: 367 AYKGHKKYLFLT 402
Y+G++ + LT
Sbjct: 606 VYQGNRLQIALT 617
>UniRef50_Q5WUU6 Cluster: Putative uncharacterized protein; n=4;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 313
Score = 33.1 bits (72), Expect = 6.6
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = -1
Query: 329 EPGRFLPLSSLQIYKSKRALTWKVSEKGREAAPEQLGVCSVEQELGVLGMTWEELEQTAQ 150
EP + P L+IYK W E G+ A+PE++ + L V+G+ EL ++ +
Sbjct: 154 EPSSYTPSKELEIYKD----IWL--EPGKVASPEKIASYFCKYNLNVIGVEIRELSKSVR 207
Query: 149 DRCKWKNLIRALH 111
++ +I +L+
Sbjct: 208 NKYSKDMVITSLY 220
>UniRef50_Q0LCB6 Cluster: Adenylyl cyclase class-3/4/guanylyl
cyclase; n=1; Herpetosiphon aurantiacus ATCC 23779|Rep:
Adenylyl cyclase class-3/4/guanylyl cyclase -
Herpetosiphon aurantiacus ATCC 23779
Length = 1271
Score = 33.1 bits (72), Expect = 6.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 119 LESNFSIYIGLGQSVLTLPTSYPRPLAPAPPSK 217
L+ F+ +GL QSV P +P P+ P PP++
Sbjct: 201 LDQRFAKVLGLEQSVRAQPIRWPEPITPHPPAQ 233
>UniRef50_Q0HHZ2 Cluster: DNA polymerase III, subunits gamma and
tau; n=2; Shewanella|Rep: DNA polymerase III, subunits
gamma and tau - Shewanella sp. (strain MR-4)
Length = 1071
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 163 SNSSHVIPKTPSSCST-EQTPSCSGAAS----LPFSDTFQVSALFD 285
S + H P T +S ST +T + SG A LPF D F++ +LF+
Sbjct: 728 SQNVHTAPATKASASTPSETKTASGEAENDFELPFDDDFEIESLFE 773
>UniRef50_Q9AR07 Cluster: Jasmonate O-methyltransferase; n=8; core
eudicotyledons|Rep: Jasmonate O-methyltransferase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 389
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 362 ESPWTSAMPGAEPGRFLPLSSLQIYKSKRALTWKVSEKGREAAPEQLGVCSVEQELG 192
ES + SA+PG+ GR P SL S +L W REA E + + + +G
Sbjct: 132 ESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLENMG 188
>UniRef50_A5BJN4 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1070
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 440 FFI*IYHTSSLHSVFPHTFSLRTQLQLTLYSFIYIIIAKKRKT 568
FF+ + H S L +FP F Q+ + SFI+++ KK T
Sbjct: 878 FFLALSHPSDLSPIFPTNFVWNFQVSFKVKSFIWLVAHKKVNT 920
>UniRef50_Q6FLV8 Cluster: Similar to sp|P23255 Saccharomyces
cerevisiae YCR042c TSM1; n=1; Candida glabrata|Rep:
Similar to sp|P23255 Saccharomyces cerevisiae YCR042c
TSM1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1385
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/76 (22%), Positives = 30/76 (39%)
Frame = -1
Query: 359 SPWTSAMPGAEPGRFLPLSSLQIYKSKRALTWKVSEKGREAAPEQLGVCSVEQELGVLGM 180
+P P ++ + PL+ Y + + V + + PE V + ELG G
Sbjct: 160 TPTIKGTPASQEAVYTPLTIKIDYNVDQPTSGLVFDTVSKTEPELWNVFTTNSELGCGGS 219
Query: 179 TWEELEQTAQDRCKWK 132
W T ++C W+
Sbjct: 220 NWMPCIDTLDEKCTWE 235
>UniRef50_Q59MA9 Cluster: Potential translation initiation factor
subunit; n=1; Candida albicans|Rep: Potential
translation initiation factor subunit - Candida albicans
(Yeast)
Length = 1363
Score = 32.7 bits (71), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 140 YIGLGQSVLTLPTSYPRPLAPAPPSKRQVVLGRPLFLFQTLSRSVLSLIYRFGENLTVE 316
+ +G LT+P+SY +A + +VL R L + L + + +I FGE +T E
Sbjct: 32 FFNVGDDYLTIPSSYEENIADLKQALNIIVLCRNLTNYSILIKGI-DIIENFGELITFE 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,146,102
Number of Sequences: 1657284
Number of extensions: 13700323
Number of successful extensions: 38691
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 36447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38634
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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