Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00263
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 425 TLHVLFFI*IYHTSSLHSVFPHTFSLRTQLQLTLYSFIYIIIA 553
           T+H+L  + IY+   +H +F   F + T   L L    Y   A
Sbjct: 249 TVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCA 291



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 425 TLHVLFFI*IYH 460
           T+H+LF + IYH
Sbjct: 157 TVHLLFLLCIYH 168


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -1

Query: 278 RALTWKVSEKGREAAPEQLGVCSVEQELGVLGMTWEELEQTAQDRCK 138
           R +   V  K R+    +L +CS   E   + ++W+E+++ A +  K
Sbjct: 428 RGVIHLVPSKIRDVYFLRLAICSRFTEKADIDISWKEVKEAADEVLK 474


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 176  TSYPRPLAPAPP 211
            T  P P+ PAPP
Sbjct: 1004 TKPPEPVTPAPP 1015


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,092
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)