Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00261
         (723 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041829-1|AAH41829.1|  300|Homo sapiens chromosome 17 open read...   111   3e-24
BC000636-1|AAH00636.2|  243|Homo sapiens C17orf39 protein protein.    111   3e-24
AK074284-1|BAB85036.1|  300|Homo sapiens protein ( Homo sapiens ...   109   1e-23
AJ293866-1|CAC10659.1|  646|Homo sapiens FNK serine/threonine pr...    30   7.3  
AK128575-1|BAC87507.1|  308|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>BC041829-1|AAH41829.1|  300|Homo sapiens chromosome 17 open reading
           frame 39 protein.
          Length = 300

 Score =  111 bits (266), Expect = 3e-24
 Identities = 50/75 (66%), Positives = 57/75 (76%)
 Frame = +3

Query: 270 ITPPPPANSKQPGVTKSLLYNGSKFQGHQKSKGNSYEVEVVLQHVDEENSYLCGYLKIKG 449
           + PPPP N++QPGV  SLLY+GSKF+GHQKSKGNSY+VEVVLQHVD  NSYLCGYLKIKG
Sbjct: 104 LIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKG 163

Query: 450 XXXXXXXXXXXXDGE 494
                       +GE
Sbjct: 164 LTEEYPTLTTFFEGE 178



 Score = 77.8 bits (183), Expect = 4e-14
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +1

Query: 505 QNPFLTRKWDADEDVDRKHWSKFDLFVPYLKTFNSDSFDYESL 633
           ++PFLTRKWDADEDVDRKHW KF  F  Y K+FNSD FDYE L
Sbjct: 183 KHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEEL 225



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 662 EEHFLVPDHTIKDINGASFA 721
           +E FLVPDHTIKDI+GASFA
Sbjct: 236 KEQFLVPDHTIKDISGASFA 255


>BC000636-1|AAH00636.2|  243|Homo sapiens C17orf39 protein protein.
          Length = 243

 Score =  111 bits (266), Expect = 3e-24
 Identities = 50/75 (66%), Positives = 57/75 (76%)
 Frame = +3

Query: 270 ITPPPPANSKQPGVTKSLLYNGSKFQGHQKSKGNSYEVEVVLQHVDEENSYLCGYLKIKG 449
           + PPPP N++QPGV  SLLY+GSKF+GHQKSKGNSY+VEVVLQHVD  NSYLCGYLKIKG
Sbjct: 47  LIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKG 106

Query: 450 XXXXXXXXXXXXDGE 494
                       +GE
Sbjct: 107 LTEEYPTLTTFFEGE 121



 Score = 77.8 bits (183), Expect = 4e-14
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +1

Query: 505 QNPFLTRKWDADEDVDRKHWSKFDLFVPYLKTFNSDSFDYESL 633
           ++PFLTRKWDADEDVDRKHW KF  F  Y K+FNSD FDYE L
Sbjct: 126 KHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEEL 168



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 662 EEHFLVPDHTIKDINGASFA 721
           +E FLVPDHTIKDI+GASFA
Sbjct: 179 KEQFLVPDHTIKDISGASFA 198


>AK074284-1|BAB85036.1|  300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23704 fis, clone HEP10851. ).
          Length = 300

 Score =  109 bits (262), Expect = 1e-23
 Identities = 49/75 (65%), Positives = 57/75 (76%)
 Frame = +3

Query: 270 ITPPPPANSKQPGVTKSLLYNGSKFQGHQKSKGNSYEVEVVLQHVDEENSYLCGYLKIKG 449
           + PPPP N++QPGV  SLLY+GSKF+GHQKSKGNSY+VEVVL+HVD  NSYLCGYLKIKG
Sbjct: 104 LIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLRHVDTGNSYLCGYLKIKG 163

Query: 450 XXXXXXXXXXXXDGE 494
                       +GE
Sbjct: 164 LTEEYPTLTTFFEGE 178



 Score = 77.8 bits (183), Expect = 4e-14
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +1

Query: 505 QNPFLTRKWDADEDVDRKHWSKFDLFVPYLKTFNSDSFDYESL 633
           ++PFLTRKWDADEDVDRKHW KF  F  Y K+FNSD FDYE L
Sbjct: 183 KHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEEL 225



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +2

Query: 662 EEHFLVPDHTIKDINGASFA 721
           +E FLVPDHTIKDI+GASFA
Sbjct: 236 KEQFLVPDHTIKDISGASFA 255


>AJ293866-1|CAC10659.1|  646|Homo sapiens FNK serine/threonine
           protein kinase protein.
          Length = 646

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 267 DITPPPPANSKQPGVTKSLLYNGSKFQGHQKSK 365
           D+TPP PA S    VTKSL     K + H + +
Sbjct: 333 DLTPPNPARSLFAKVTKSLFVRKKKSKNHAQER 365


>AK128575-1|BAC87507.1|  308|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46734 fis, clone TRACH3020563. ).
          Length = 308

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 279 PPPANSKQPGVTKSLLYNGSK-FQGHQKSKGNSY 377
           PPPA S+ PG   SL  +GSK + G  +S G ++
Sbjct: 117 PPPAASRPPGPGLSLYTDGSKAWGGRHRSTGGAH 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,132,927
Number of Sequences: 237096
Number of extensions: 1773262
Number of successful extensions: 4043
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4030
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)