Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00260
         (758 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041829-1|AAH41829.1|  300|Homo sapiens chromosome 17 open read...   156   7e-38
BC000636-1|AAH00636.2|  243|Homo sapiens C17orf39 protein protein.    156   7e-38
AK074284-1|BAB85036.1|  300|Homo sapiens protein ( Homo sapiens ...   156   7e-38
AJ293866-1|CAC10659.1|  646|Homo sapiens FNK serine/threonine pr...    30   7.9  

>BC041829-1|AAH41829.1|  300|Homo sapiens chromosome 17 open reading
           frame 39 protein.
          Length = 300

 Score =  156 bits (379), Expect = 7e-38
 Identities = 67/84 (79%), Positives = 71/84 (84%)
 Frame = +2

Query: 506 QYPFLTRKWDADEDVDRKHWSKFDLFVPYLKTFNSDSFDYESLAKADYVFMRWKEHFLVP 685
           ++PFLTRKWDADEDVDRKHW KF  F  Y K+FNSD FDYE L   DYVFMRWKE FLVP
Sbjct: 183 KHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVP 242

Query: 686 DHTIKDINGASFAGFYYICFHKSA 757
           DHTIKDI+GASFAGFYYICF KSA
Sbjct: 243 DHTIKDISGASFAGFYYICFQKSA 266



 Score =  120 bits (288), Expect = 8e-27
 Identities = 55/83 (66%), Positives = 62/83 (74%)
 Frame = +3

Query: 270 ITPPPPANSKQPGVTKSLLYNGSKFQGHQKSKGNSYEVEVVLQHVDEENSYLCGYLKIKG 449
           + PPPP N++QPGV  SLLY+GSKF+GHQKSKGNSY+VEVVLQHVD  NSYLCGYLKIKG
Sbjct: 104 LIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKG 163

Query: 450 XXXXXXXXXXXXDGEIISSNIPF 518
                       +GEIIS   PF
Sbjct: 164 LTEEYPTLTTFFEGEIISKKHPF 186


>BC000636-1|AAH00636.2|  243|Homo sapiens C17orf39 protein protein.
          Length = 243

 Score =  156 bits (379), Expect = 7e-38
 Identities = 67/84 (79%), Positives = 71/84 (84%)
 Frame = +2

Query: 506 QYPFLTRKWDADEDVDRKHWSKFDLFVPYLKTFNSDSFDYESLAKADYVFMRWKEHFLVP 685
           ++PFLTRKWDADEDVDRKHW KF  F  Y K+FNSD FDYE L   DYVFMRWKE FLVP
Sbjct: 126 KHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVP 185

Query: 686 DHTIKDINGASFAGFYYICFHKSA 757
           DHTIKDI+GASFAGFYYICF KSA
Sbjct: 186 DHTIKDISGASFAGFYYICFQKSA 209



 Score =  120 bits (288), Expect = 8e-27
 Identities = 55/83 (66%), Positives = 62/83 (74%)
 Frame = +3

Query: 270 ITPPPPANSKQPGVTKSLLYNGSKFQGHQKSKGNSYEVEVVLQHVDEENSYLCGYLKIKG 449
           + PPPP N++QPGV  SLLY+GSKF+GHQKSKGNSY+VEVVLQHVD  NSYLCGYLKIKG
Sbjct: 47  LIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLQHVDTGNSYLCGYLKIKG 106

Query: 450 XXXXXXXXXXXXDGEIISSNIPF 518
                       +GEIIS   PF
Sbjct: 107 LTEEYPTLTTFFEGEIISKKHPF 129


>AK074284-1|BAB85036.1|  300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23704 fis, clone HEP10851. ).
          Length = 300

 Score =  156 bits (379), Expect = 7e-38
 Identities = 67/84 (79%), Positives = 71/84 (84%)
 Frame = +2

Query: 506 QYPFLTRKWDADEDVDRKHWSKFDLFVPYLKTFNSDSFDYESLAKADYVFMRWKEHFLVP 685
           ++PFLTRKWDADEDVDRKHW KF  F  Y K+FNSD FDYE L   DYVFMRWKE FLVP
Sbjct: 183 KHPFLTRKWDADEDVDRKHWGKFLAFYQYAKSFNSDDFDYEELKNGDYVFMRWKEQFLVP 242

Query: 686 DHTIKDINGASFAGFYYICFHKSA 757
           DHTIKDI+GASFAGFYYICF KSA
Sbjct: 243 DHTIKDISGASFAGFYYICFQKSA 266



 Score =  118 bits (284), Expect = 2e-26
 Identities = 54/83 (65%), Positives = 62/83 (74%)
 Frame = +3

Query: 270 ITPPPPANSKQPGVTKSLLYNGSKFQGHQKSKGNSYEVEVVLQHVDEENSYLCGYLKIKG 449
           + PPPP N++QPGV  SLLY+GSKF+GHQKSKGNSY+VEVVL+HVD  NSYLCGYLKIKG
Sbjct: 104 LIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYDVEVVLRHVDTGNSYLCGYLKIKG 163

Query: 450 XXXXXXXXXXXXDGEIISSNIPF 518
                       +GEIIS   PF
Sbjct: 164 LTEEYPTLTTFFEGEIISKKHPF 186


>AJ293866-1|CAC10659.1|  646|Homo sapiens FNK serine/threonine
           protein kinase protein.
          Length = 646

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 267 DITPPPPANSKQPGVTKSLLYNGSKFQGHQKSK 365
           D+TPP PA S    VTKSL     K + H + +
Sbjct: 333 DLTPPNPARSLFAKVTKSLFVRKKKSKNHAQER 365


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,648,363
Number of Sequences: 237096
Number of extensions: 1881043
Number of successful extensions: 4315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4302
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)