Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00259
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    26   1.3  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   9.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   9.1  

>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 543 ERDEFESFVKRAASLMTAALCSTARNMDLSTLGGR 647
           ERD   S+V  A  L+  +L S  R  + +  GG+
Sbjct: 2   ERDRSSSYVAAALLLVCISLASAPRGTEANIFGGK 36


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 99  RYTPTEPRFRIRFIFAVPVASCWPAP 22
           R TP+ PR        VP +S W  P
Sbjct: 48  RSTPSSPRLAQASTCPVPCSSIWSRP 73


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
 Frame = -1

Query: 259  PHSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSL---SSYPNRRYGSWDQVHP 89
            P ++R    S   L P P  + VH + +    T+    R L     YP+    S+  + P
Sbjct: 1364 PQAIRKAVSSLLALRPLPKPTQVHFKASLQGITLTDNTRQLFFRRHYPSNNV-SFCALDP 1422

Query: 88   D--RTSISDT 65
            D  R SI  T
Sbjct: 1423 DDRRWSIQST 1432


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,433
Number of Sequences: 2352
Number of extensions: 17457
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)