Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00258
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.2  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 169 ENHRLCHLVNAFRCLF 122
           E  +L HL+  +RC+F
Sbjct: 269 EKRKLIHLLQEYRCIF 284


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 40  YYVLKFVAYLIYVRYHVHTILYRQISRK 123
           Y +L F   ++Y+   ++ ILY  +S K
Sbjct: 330 YNILYFCRIMVYLNSAINPILYNLMSSK 357


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 563 SFAFALNSFSHTTSHVDYYQFDY 631
           SF +  N   H TS  +YY  +Y
Sbjct: 283 SFNWTANGHGHNTSSHNYYAQNY 305


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 429 STN*CM*KRNCIHNKNYF 376
           STN C  +  C+ NKN +
Sbjct: 104 STNPCENQATCVQNKNQY 121


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 28  ICLIYYVLKFVAYLIYVRYHVHTILYRQIS 117
           IC +   +    ++IYVR +   I + +IS
Sbjct: 47  ICFLLSTILGTCWIIYVRIYCKEIRFFEIS 76


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 37  IYYVLKFVAYLIYVRYHVHTILY 105
           +YY+L FV  ++YV    + + Y
Sbjct: 99  LYYLLLFVINVLYVLTLCYAVYY 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,158
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)