Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00257
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.9  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.6  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 353 GYGHFQSFQSQ*RTVVCYK 297
           G+G FQ  Q   +T +C+K
Sbjct: 288 GFGDFQPSQVHKQTAICFK 306


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +3

Query: 588 DLGDHYLDCGDLTSALKCYSRARDYCTSG--KHL 683
           D GD ++ CG     LK +   +   TSG  KH+
Sbjct: 394 DTGDKHIQCGRRADVLKFWFMWKAKGTSGLEKHV 427


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 152 FISNIIGGF*AFFNENTRNLLSTMKTNS 69
           F  NI+  F   FNE T+ L+  ++  S
Sbjct: 134 FHFNILQEFIQIFNEETKRLVEDLEAES 161


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 660 YCTSGKHLVMMCLNVVKVS 716
           +C   KHLV +  N+VKV+
Sbjct: 226 FCNKIKHLVNLHKNLVKVA 244


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 328 NRNDGQWSATNMSL*SFAKPVYDAAMFP 245
           N  D   SAT++ L +F  P Y     P
Sbjct: 19  NSGDSTSSATSIDLSTFRVPTYGTTSHP 46


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 328 NRNDGQWSATNMSL*SFAKPVYDAAMFP 245
           N  D   SAT++ L +F  P Y     P
Sbjct: 19  NSGDSTSSATSIDLSTFRVPTYGTTSHP 46


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 67  DELVFIVDSKFRVFSLKKA*NPPIMFEMNTAEPMQV 174
           D+L+ I +    ++ LKK   P +  E  T EP+ +
Sbjct: 255 DKLLQISEKVANIWGLKKVYAPVVDGEFLTDEPIAI 290


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 67  DELVFIVDSKFRVFSLKKA*NPPIMFEMNTAEPMQV 174
           D+L+ I +    ++ LKK   P +  E  T EP+ +
Sbjct: 255 DKLLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAI 290


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 67  DELVFIVDSKFRVFSLKKA*NPPIMFEMNTAEPMQV 174
           DE + I +    ++ LKK   P +  E  T EP+ +
Sbjct: 257 DEFLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAI 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,517
Number of Sequences: 336
Number of extensions: 3985
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)