Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00257
(798 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p pro... 190 1e-48
AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA... 190 1e-48
AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9 signalo... 188 6e-48
BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p pro... 106 4e-23
AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA... 106 4e-23
AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA... 31 2.4
>AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p
protein.
Length = 525
Score = 190 bits (464), Expect = 1e-48
Identities = 106/210 (50%), Positives = 130/210 (61%), Gaps = 39/210 (18%)
Frame = +3
Query: 255 AASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSE------- 413
A Y G +L+RL++VAD CP L +EALKMAI+YV TTYNVNLY LHK+LS+
Sbjct: 49 ANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAP 108
Query: 414 -----------------AVASAGLPDIAG--------------SQDIPVLDTIWVESKQK 500
+A+A LPDIA +D D WV++K K
Sbjct: 109 APPANAGGDQAGAAAPGPLAAAPLPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMK 168
Query: 501 KLP-KTGKARY*FEKL*NKFNQESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGK 677
K K K + + +ESIRRGHDDL DHYL CGDLT+ALKCYSRARDYCTSGK
Sbjct: 169 KAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGK 228
Query: 678 HLVMMCLNVVKVSVYLQNWAHVLNYVSKVK 767
H+V MCLNV+KVS+YLQNWAHV++Y+SK +
Sbjct: 229 HVVNMCLNVIKVSIYLQNWAHVMSYISKAE 258
Score = 53.6 bits (123), Expect = 3e-07
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Frame = +1
Query: 130 PPIMFEMNTAEPMQVDIPP--EDNENNETECYVVENPTLDLE 249
PP+M N EPMQVDI P EDNENNE + VVENP++DLE
Sbjct: 7 PPLM--QNAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLE 46
>AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA
protein.
Length = 525
Score = 190 bits (464), Expect = 1e-48
Identities = 106/210 (50%), Positives = 130/210 (61%), Gaps = 39/210 (18%)
Frame = +3
Query: 255 AASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSE------- 413
A Y G +L+RL++VAD CP L +EALKMAI+YV TTYNVNLY LHK+LS+
Sbjct: 49 ANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAP 108
Query: 414 -----------------AVASAGLPDIAG--------------SQDIPVLDTIWVESKQK 500
+A+A LPDIA +D D WV++K K
Sbjct: 109 APPANAGGDQAGAAAPGPLAAAPLPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMK 168
Query: 501 KLP-KTGKARY*FEKL*NKFNQESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGK 677
K K K + + +ESIRRGHDDL DHYL CGDLT+ALKCYSRARDYCTSGK
Sbjct: 169 KAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGK 228
Query: 678 HLVMMCLNVVKVSVYLQNWAHVLNYVSKVK 767
H+V MCLNV+KVS+YLQNWAHV++Y+SK +
Sbjct: 229 HVVNMCLNVIKVSIYLQNWAHVMSYISKAE 258
Score = 53.6 bits (123), Expect = 3e-07
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Frame = +1
Query: 130 PPIMFEMNTAEPMQVDIPP--EDNENNETECYVVENPTLDLE 249
PP+M N EPMQVDI P EDNENNE + VVENP++DLE
Sbjct: 7 PPLM--QNAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLE 46
>AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9
signalosome subunit 1 CSN1 protein.
Length = 525
Score = 188 bits (459), Expect = 6e-48
Identities = 105/210 (50%), Positives = 130/210 (61%), Gaps = 39/210 (18%)
Frame = +3
Query: 255 AASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSE------- 413
A Y G +L+RL++VAD CP L +EALKMAI+YV TTYNVNLY LHK+LS+
Sbjct: 49 ANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAP 108
Query: 414 -----------------AVASAGLPDIAG--------------SQDIPVLDTIWVESKQK 500
+A+A LPDIA +D D WV++K K
Sbjct: 109 APPANAGGDQAGAAAPGPLAAAPLPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMK 168
Query: 501 KLP-KTGKARY*FEKL*NKFNQESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGK 677
K K K + + +ESIRRGHDDL DHYL CGDLT+ALKCYSRAR+YCTSGK
Sbjct: 169 KAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARNYCTSGK 228
Query: 678 HLVMMCLNVVKVSVYLQNWAHVLNYVSKVK 767
H+V MCLNV+KVS+YLQNWAHV++Y+SK +
Sbjct: 229 HVVNMCLNVIKVSIYLQNWAHVMSYISKAE 258
Score = 53.6 bits (123), Expect = 3e-07
Identities = 27/42 (64%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Frame = +1
Query: 130 PPIMFEMNTAEPMQVDIPP--EDNENNETECYVVENPTLDLE 249
PP+M N EPMQVDI P EDNENNE + VVENP++DLE
Sbjct: 7 PPLM--QNAVEPMQVDIAPPNEDNENNEEQQIVVENPSIDLE 46
>BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p
protein.
Length = 364
Score = 106 bits (254), Expect = 4e-23
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 21/193 (10%)
Frame = +3
Query: 255 AASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKL--------- 407
A YT +L RL F+A CP L + AL++A+++V TTYNV LY L+K L
Sbjct: 15 ADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDELYKTLCVEVDRKYP 74
Query: 408 SEAVASAGLPDIAGSQD---------IPVLDTIWVESKQKK---LPKTGKARY*FEKL*N 551
+++ + L GS+ + D+ WVE + + + A F+K +
Sbjct: 75 NQSKGNEELHTTGGSEPSTSSGRGRVVVPYDSYWVEDNIMEATLMLQELDAELNFKK--S 132
Query: 552 KFNQESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQN 731
+RR +++GDH+ G+L A+K Y+RAR YCTS ++++ M N+++VS+Y++N
Sbjct: 133 NSGSSYVRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMEN 192
Query: 732 WAHVLNYVSKVKR 770
W HVL Y+ + K+
Sbjct: 193 WWHVLTYIDEAKQ 205
>AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA
protein.
Length = 364
Score = 106 bits (254), Expect = 4e-23
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 21/193 (10%)
Frame = +3
Query: 255 AASYTGFAKLYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKL--------- 407
A YT +L RL F+A CP L + AL++A+++V TTYNV LY L+K L
Sbjct: 15 ADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDELYKTLCVEVDRKYP 74
Query: 408 SEAVASAGLPDIAGSQD---------IPVLDTIWVESKQKK---LPKTGKARY*FEKL*N 551
+++ + L GS+ + D+ WVE + + + A F+K +
Sbjct: 75 NQSKGNEELHTTGGSEPSTSSGRGRVVVPYDSYWVEDNIMEATLMLQELDAELNFKK--S 132
Query: 552 KFNQESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQN 731
+RR +++GDH+ G+L A+K Y+RAR YCTS ++++ M N+++VS+Y++N
Sbjct: 133 NSGSSYVRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMEN 192
Query: 732 WAHVLNYVSKVKR 770
W HVL Y+ + K+
Sbjct: 193 WWHVLTYIDEAKQ 205
>AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA
protein.
Length = 2444
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 576 RGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLNYV 755
R +LG + G ALKCY R + T M CL + +V L+ ++Y+
Sbjct: 966 RALSNLGSVHESLGQQAEALKCYERQLELSTDRLAKAMACLALGRVHHQLEQHNQAVDYL 1025
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,562,831
Number of Sequences: 53049
Number of extensions: 705816
Number of successful extensions: 1816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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