Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00256
(680 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 62 7e-11
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 56 6e-09
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 51 2e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 50 4e-07
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 50 4e-07
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 48 1e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 46 7e-06
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 45 9e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 40 3e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 39 8e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.022
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 33 0.029
SPAC3A11.11c |||pyridoxal reductase |Schizosaccharomyces pombe|c... 27 2.5
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 4.4
SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces... 25 7.7
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 62.1 bits (144), Expect = 7e-11
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 312 NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAF 491
NK F +NL+ H H+ +P+ C +C+K+FAR+ + R H + HTG + F+C TC F
Sbjct: 578 NKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRF 637
Query: 492 SQRSNL 509
++ L
Sbjct: 638 ARMDAL 643
Score = 54.4 bits (125), Expect = 1e-08
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARR 416
F A L H TH++ + F C + KSF QH+ H +H+ K + C C + FAR
Sbjct: 581 FTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARM 640
Query: 417 AEVRDHMRTHTGE 455
+ H ++ G+
Sbjct: 641 DALNRHYKSEVGQ 653
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 378 YVCGV--CEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQR 500
YVC C K F R ++ HM THT RPF C C +F+++
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQ 612
Score = 39.5 bits (88), Expect = 4e-04
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 118 GSHRC--ARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFTQQN 255
G++ C A C K F Y L+ H+ H++ RP CS C+KSF Q +
Sbjct: 568 GNYVCTFAGCNKRFTRAYNLKSHMNTHTNY-RPFQCSICKKSFARQHD 614
Score = 34.7 bits (76), Expect = 0.013
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 512 SHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
SH + TH N R C+ C K F R+ H + HTG + C TC F
Sbjct: 589 SHMN-THTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRF 637
Score = 33.5 bits (73), Expect = 0.029
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 557 AQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
A C KRF R L+ H+ +HT RP +C C SF
Sbjct: 575 AGCNKRFTRAYNLKSHMN-THTNYRPFQCSICKKSF 609
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +3
Query: 228 REVFLHAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVH 350
++ F + +HE+ H+ +K F C N+ F L H
Sbjct: 606 KKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 55.6 bits (128), Expect = 6e-09
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 315 KSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRTHTGERPFSC--DTCG 482
K + LE H HS E+P+VC C KAF R++ ++ H R HT +PFSC D C
Sbjct: 32 KKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCD 91
Query: 483 AAFSQRSNL 509
A F + +L
Sbjct: 92 AQFYTQQHL 100
Score = 52.8 bits (121), Expect = 4e-08
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV--*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAE 422
L QH +THS+ + FVC +K+F + +L++H H+ KP+ C C+ F +
Sbjct: 40 LEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQH 99
Query: 423 VRDHMRTHTGERPFSC--DTCGAAFSQRSNL 509
+ H+ H +P++C + C FS+ L
Sbjct: 100 LERHIEVHRKPKPYACTWEGCDECFSKHQQL 130
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Frame = +3
Query: 300 CGV*NKSFGTQHNLEVHGIVHS----REKPYVCGV--CEKAFARRAEVRDHMRT-HTGER 458
C + + F T +L H ++H K Y C + C+K+F R + ++ H+ H G
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 459 PFSCDTCGAAFSQRSNL 509
F CD+CG F + L
Sbjct: 266 AFHCDSCGTKFGYKHML 282
Score = 42.7 bits (96), Expect = 5e-05
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +2
Query: 527 THLNERR-HHCAQ--CPKRFKRRRLLEYHIKASHTGERPLKCDTCGASFVY 670
T L ER+ +HC C K F R L+ HI H G CD+CG F Y
Sbjct: 228 TTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGY 278
Score = 42.3 bits (95), Expect = 6e-05
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +3
Query: 393 CEKAFARRAEVRDHMRTHTGERPFSCD--TCGAAFSQRSNL 509
C K ++R + + H+RTH+ ERPF CD C AF ++S+L
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHL 70
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 551 HCA--QCPKRFKRRRLLEYHIKASHTGERPLKCDTCGAS 661
HC +C K++ R LLE H++ +H+ ERP CD G S
Sbjct: 24 HCPYEECGKKYSRPSLLEQHLR-THSNERPFVCDYTGCS 61
Score = 29.9 bits (64), Expect = 0.36
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +1
Query: 73 HFAEHSLKPRT---RAAGGSHRCA--RCRKTFASKYTLQEHLKIHS-DRPRPXSCSQCEK 234
HF E S++ + R+A C C K ++ L++HL+ HS +RP + C K
Sbjct: 3 HFNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSK 62
Query: 235 SFFTQQN 255
+F+ + +
Sbjct: 63 AFYRKSH 69
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 50.8 bits (116), Expect = 2e-07
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 312 NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCD 473
NK ++N+E H H ++PY C +C+ F R +++ H+R H RP+ C+
Sbjct: 451 NKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE 504
Score = 45.2 bits (102), Expect = 9e-06
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 378 YVC--GVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
YVC C K AR+ V H++TH +RP+ CD C A F + +L
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDL 488
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDH 434
+ H +TH S + + C + F H+L+ H +H +PYVC C K F R + H
Sbjct: 460 VESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRH 518
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 563 CPKRFKRRRLLEYHIKASHTGERPLKCDTCGASFV 667
C KR R+ +E HI+ +H +RP +CD C A FV
Sbjct: 450 CNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFV 483
Score = 33.1 bits (72), Expect = 0.038
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 100 RTRAAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSF 240
+T + +RC C+ F + L+ HL+IH + RP C +C K F
Sbjct: 465 QTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH-ENGRPYVC-ECLKRF 509
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 112 AGGSHRCAR--CRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSF 240
A G + C C K A KY ++ H++ H RP C C+ F
Sbjct: 439 ADGKYVCLYNGCNKRIARKYNVESHIQTHLS-DRPYRCDLCKAGF 482
Score = 31.5 bits (68), Expect = 0.12
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 527 THLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCD 646
THL++R + C C F R L+ H++ H RP C+
Sbjct: 466 THLSDRPYRCDLCKAGFVRHHDLKRHLRI-HENGRPYVCE 504
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 49.6 bits (113), Expect = 4e-07
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDT-------CGAAFSQRSNL 509
K YVC C +AFAR ++ H+R+HT E+PF+C CG FS+R L
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLL 120
Score = 32.3 bits (70), Expect = 0.067
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Frame = +3
Query: 285 VKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV-------CEKAFARR-AEVRDHMR 440
VK +VC ++F +L+ H H+ EKP+ C C + F+RR +R +
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 441 THTGERP 461
H +P
Sbjct: 127 IHRNPQP 133
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 49.6 bits (113), Expect = 4e-07
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGERPFSCD--TCGAAFSQRSNL 509
Y C C + F+R + ++ H +HTGERPF CD CG AF+ RSN+
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNM 513
Score = 45.2 bits (102), Expect = 9e-06
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 434 HEDAHRRASVLVRHVRRGVLAALQPDSHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKA 613
H + +RA V RH +A S +++ N R + C +C + F R L+ H
Sbjct: 431 HHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVR-YRCTECLQGFSRPSSLKIHTY- 488
Query: 614 SHTGERPLKCD--TCGASF 664
SHTGERP CD CG +F
Sbjct: 489 SHTGERPFVCDYAGCGKAF 507
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 315 KSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRTH 446
+ F +L++H H+ E+P+VC C KAF R+ +R H R H
Sbjct: 475 QGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 48.0 bits (109), Expect = 1e-06
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 288 KDFVCGV*NKSFGTQHNLEVH-GIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERP 461
K FVC +K F +L H +H+ EKP+VC +C K F+RR +R H R H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 554 CAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
C +C K+FKR L HI++ HT E+P C CG F
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRF 460
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 106 RAAGG-SHRCARCRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSFFTQQN 255
R+ GG S C C K F L+ H++ +P C C K F + N
Sbjct: 416 RSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDN 465
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 45.6 bits (103), Expect = 7e-06
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSC--DTCGAAFSQRSNL 509
+PY C +C KAF R H+RTHTGE+P C C FS+ L
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDEL 71
Score = 36.7 bits (81), Expect = 0.003
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRT 443
K + + + C + K+F + H H+ EKP+VC C K F+R E+ H R
Sbjct: 18 KNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI 77
Query: 444 HT 449
HT
Sbjct: 78 HT 79
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 45.2 bits (102), Expect = 9e-06
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCD--TCGAAFSQRSNL 509
K Y C C++ F R+ H+R+HTGE+PF C +C F++R L
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDEL 49
Score = 38.7 bits (86), Expect = 8e-04
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 285 VKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRTH 446
+K + C + F Q + H H+ EKP+ C C+K F RR E+ H+RTH
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.1 bits (67), Expect = 0.15
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 542 RRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKC 643
+ + C C + F R+ HI+ SHTGE+P +C
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIR-SHTGEKPFEC 34
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 39.9 bits (89), Expect = 3e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 393 CEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
C K+F R+ +R H RTH + FSC C AF++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Score = 32.7 bits (71), Expect = 0.050
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 315 KSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMR 440
KSF + +L H H K + C C +AFAR + H++
Sbjct: 35 KSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 32.7 bits (71), Expect = 0.050
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVH 350
F L +HE+TH +VK F C N++F L H
Sbjct: 37 FTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 527 THLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPL 637
TH N + C+ C + F R +L H++ H ++ L
Sbjct: 49 THENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNL 85
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 38.7 bits (86), Expect = 8e-04
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 393 CEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
C K+F R+ R H R+HT + F C C ++F++
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTR 58
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +3
Query: 315 KSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHM 437
KSF + + H H+ K ++C C +F R + H+
Sbjct: 26 KSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 33.9 bits (74), Expect = 0.022
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 339 LEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRT 443
L H H+ EKP++C V C+++F R + HMRT
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 432 HMRTHTGERPFSCDT--CGAAFSQRSNL 509
H+R+HTGE+PF C C +F++ L
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDAL 123
Score = 29.5 bits (63), Expect = 0.47
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Frame = +2
Query: 464 LVRHVRRGVLAALQPDSHRSAT--HLNERR--HHCA--QCPKRFK---RRRLLEYHIKAS 616
LV H+ G + L+ S+ ++ H+ RR + C CP++ R L H++ S
Sbjct: 41 LVHHIHNGTTSNLRLISNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLR-S 99
Query: 617 HTGERPLKCDT--CGASF 664
HTGE+P C C SF
Sbjct: 100 HTGEKPFICSVPECDRSF 117
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 33.5 bits (73), Expect = 0.029
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 536 NERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTC 652
++R C QC KRF R L H KA H+ P+ C C
Sbjct: 27 SKRVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYC 64
Score = 30.7 bits (66), Expect = 0.20
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 282 SVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMR 440
S + F C K F NL H HS+ +P C CE R+ ++ H++
Sbjct: 27 SKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
>SPAC3A11.11c |||pyridoxal reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 152 KVFLQRAQRCDPPAARVRGFRECSAKCV 69
KVFL DP RV G REC K +
Sbjct: 77 KVFLSVKGAFDPETHRVHGTRECITKSI 104
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 533 LNERRHHCAQCPKRFKRRRLLEYHIKASH 619
+ + + C C KR+K L+YH SH
Sbjct: 394 VENKPYRCEVCSKRYKNLNGLKYHRTHSH 422
>SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 563 CPKRFKRRRLLEYHIKASHTGERPLKCDTCGA 658
C FK RL+ + + +P CD+CG+
Sbjct: 263 CQVSFKVERLVHKELNEYLSWMQPFTCDSCGS 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,766,722
Number of Sequences: 5004
Number of extensions: 30616
Number of successful extensions: 170
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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