Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00256
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 50 2e-06
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 49 3e-06
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 48 9e-06
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 42 5e-04
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 41 8e-04
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 40 0.001
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 40 0.002
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 39 0.004
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 38 0.006
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 37 0.017
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 36 0.039
03_04_0187 - 18236041-18236643 34 0.091
12_01_0454 + 3580332-3581714 33 0.21
03_06_0607 + 35037467-35038624 33 0.21
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 33 0.28
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 33 0.28
07_03_1165 - 24459156-24460139 32 0.37
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 32 0.48
02_04_0316 - 21978330-21979397 32 0.48
12_02_0916 - 24271151-24271894 31 0.84
08_02_1602 - 28148255-28149413,28151927-28152087 31 0.84
06_03_0743 + 24069752-24070483,24071890-24072345 31 0.84
05_05_0022 + 21592403-21593083,21593720-21594208 31 0.84
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 31 0.84
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 31 1.1
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 31 1.1
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 31 1.1
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 30 1.5
03_04_0188 - 18241815-18242477 30 1.5
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 30 1.5
01_06_1614 - 38648495-38649706 30 1.5
01_06_1412 - 37140654-37141088,37141549-37142214 30 2.0
09_04_0564 + 18565583-18566449,18569662-18570123 29 2.6
09_02_0366 + 7941550-7942161,7942230-7942775 29 2.6
08_02_1172 + 24898290-24899141,24900864-24901328 29 2.6
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 29 2.6
05_05_0117 + 22503271-22503891 29 2.6
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 3.4
01_06_1495 + 37769982-37771496 29 3.4
09_02_0226 - 6007656-6008063,6012166-6012678 29 4.5
06_03_1478 - 30420097-30420651 29 4.5
06_01_0135 + 1039018-1041474 28 6.0
05_01_0382 + 2985526-2986659 28 6.0
04_01_0354 - 4646826-4647314 28 6.0
02_05_0201 + 26687369-26689228 28 6.0
11_04_0142 + 14027726-14029081 28 7.9
08_01_0400 - 3538570-3540363,3540895-3541639,3543688-3544007 28 7.9
07_03_1095 + 23926977-23927657 28 7.9
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 7.9
03_05_0291 - 22837412-22838128 28 7.9
02_05_0944 + 32980540-32980788,32980873-32981283,32981383-329814... 28 7.9
01_01_0990 + 7847066-7847478,7847713-7848679 28 7.9
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 228 REVFLHAAELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEK 401
R F + AEL+ H+K +VK CG + F + L H +H+ + PY C C
Sbjct: 548 RMTFKNRAELSVHKKNTCTVKS--CG---RHFRSHKYLRRHQSIHNDDMPYKCPWEGCSM 602
Query: 402 AFARRAEVRDHMRTHTGERPFSCDTCGAA 488
AF + +H + H G+RP+ C T G +
Sbjct: 603 AFKWSWDRGEHFQVHAGKRPYKCTTPGCS 631
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 249 AELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVC--GVCEKAFARRAE 422
AEL H++ + D CG K F + L+ H VH E+P+ C C F
Sbjct: 809 AELRAHQRNICT--DESCG---KRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWA 863
Query: 423 VRDHMRTHTGERPFSCDT--CGAAF 491
+H+R HTGERP+ C CG +F
Sbjct: 864 QTEHIRVHTGERPYKCSAPDCGQSF 888
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/51 (45%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +2
Query: 530 HLNERRHHCAQ--CPKRFKRRRLLEYHIKASHTGERPLKCDT--CGASFVY 670
H +ER C CP FK HI+ HTGERP KC CG SF Y
Sbjct: 841 HRDERPFKCPWDGCPMTFKWLWAQTEHIRV-HTGERPYKCSAPDCGQSFRY 890
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +3
Query: 231 EVFLHAAELNQHEKTHSSVKDFVCGV*N--KSFGTQHNLEVHGIVHSREKPYVCGV--CE 398
+ F+ A L +H H+ + ++C K F L+ H ++H+ +K ++C C
Sbjct: 96 KTFVDVAALRKHAHVHNE-RQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCG 154
Query: 399 KAFARRAEVRDHMRTHTGERPFSC--DTCGAAFSQRSNL 509
KAF+ +R H++TH E C CG F+ S L
Sbjct: 155 KAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKL 193
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 294 FVCGV*N--KSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRTHTGERP 461
F+C N K+F L H VH+ E+ Y+C C K F ++++ H HTG++
Sbjct: 87 FLCSYENCGKTFVDVAALRKHAHVHN-ERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKD 145
Query: 462 FSC--DTCGAAFSQRSNL 509
F C CG AFS NL
Sbjct: 146 FICPHPGCGKAFSLDFNL 163
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 315 KSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEVRDHMRTHTGERPFSCDT--CG 482
K F L H VH E+P C C+KAF +HMR HTG RP+ C CG
Sbjct: 1262 KKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCG 1321
Query: 483 AAF 491
F
Sbjct: 1322 QTF 1324
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 279 SSVKDFVCGV*--NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTG 452
+ V F C + + SF TQ +L ++H R+ V G C+K F + H + H
Sbjct: 1225 NKVAKFPCDIEGCDMSFSTQQDL----LLHKRDICPVKG-CKKKFFCHKYLLQHRKVHID 1279
Query: 453 ERPFSC 470
ERP C
Sbjct: 1280 ERPLKC 1285
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 142 RKTFASKYTLQEHLKIHSDRPRPXSCS--QCEKSF 240
+K F KY LQ H K+H D RP C+ C+K+F
Sbjct: 1262 KKFFCHKYLLQ-HRKVHIDE-RPLKCTWKGCKKAF 1294
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 563 CPKRFKRRRLLEYHIKASHTGERPLKC--DTCGASFVYP 673
C K+F + L H K H ERPLKC C +F +P
Sbjct: 1260 CKKKFFCHKYLLQHRKV-HIDERPLKCTWKGCKKAFKWP 1297
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 41.1 bits (92), Expect = 8e-04
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 252 ELNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARRAEV 425
+L+ H+ VK CG K F + L H VH+ ++P C C AF
Sbjct: 1102 DLSLHKSDICPVKG--CG---KKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWAR 1156
Query: 426 RDHMRTHTGERPFSCDTCGAA 488
+H+R HTG+RP+ C G A
Sbjct: 1157 TEHLRVHTGDRPYVCHEPGCA 1177
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +1
Query: 52 QRTDYTTHFAEHSLKPRTRAAGGSHRCARC------RKTFASKYTLQEHLKIHSDRPRPX 213
Q +Y+ S+ RT+ H+ C +K F+ KY LQ H K+H+D RP
Sbjct: 1082 QAVEYSCDIEGCSMSFRTKRDLSLHKSDICPVKGCGKKFFSHKYLLQ-HRKVHTD-DRPL 1139
Query: 214 SC 219
+C
Sbjct: 1140 TC 1141
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 563 CPKRFKRRRLLEYHIKASHTGERPLKC--DTCGASFVYP 673
C K+F + L H K HT +RPL C C +F +P
Sbjct: 1116 CGKKFFSHKYLLQHRKV-HTDDRPLTCPWKGCNMAFKWP 1153
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = +3
Query: 249 AELNQHEKTHSSVKDFVCGV*N--KSFGTQHNLEVHGIVHSREKPYVCGV--CEKAFARR 416
AEL + E T + F+C K+F L H VH E+ YVC C+K F
Sbjct: 30 AELAKPEPTTEVL--FLCSYEGCGKTFVDAGALRKHAHVHG-ERQYVCHYAGCDKKFLDS 86
Query: 417 AEVRDHMRTHTGERPFSC--DTCG--AAFSQRSNL 509
++++ H HTGE+ F C + CG AFS NL
Sbjct: 87 SKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNL 121
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVC---GV*NK-SFGTQHNLEVHGIVHSREKPYVCGV--CE 398
FL +++L +H H+ K+FVC G +F NL+ H HS + +VC C
Sbjct: 83 FLDSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECA 142
Query: 399 KAFARRAEVRDHMR 440
+ F + +++R H++
Sbjct: 143 RRFTQESKLRAHIK 156
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 139 CRKTFASKYTLQEHLKIHSDRPRPXSCSQCEKSF 240
C KTF L++H +H +R + C+K F
Sbjct: 50 CGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKF 83
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 360 HSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
HS + + C C KA+A ++ + H++T G R SCD CG FS+
Sbjct: 138 HSGHRQWACARCSKAYAVHSDYKAHLKT-CGTRGHSCD-CGRVFSR 181
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 360 HSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQR 500
H + +VC C K +A +++ + H++T G R SCD CG FS++
Sbjct: 125 HGGRRQWVCARCAKGYAVQSDYKAHLKT-CGTRGHSCD-CGRVFSRK 169
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 360 HSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQ 497
HS + + C C KA+A ++ + H++T G R +CD CG FS+
Sbjct: 137 HSGHRQWACSRCSKAYAVHSDYKAHLKT-CGTRGHTCD-CGRVFSR 180
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKC--DTCGASFVY 670
H + R H C F ++ L+ H+KA H +RP C CG SF Y
Sbjct: 434 HEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSY 487
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 318 SFGTQHNLEVH-GIVHSREKPYVCGV--CEKAFARRAEVRDH 434
SF + NL+ H VH +++P+VCG C K+F+ + VRD+
Sbjct: 453 SFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSYK-HVRDN 493
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 354 IVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSC--DTCGAAFSQRSNL 509
+VH E + C C +F + A ++ HM++H+ ER F C + C ++ ++ +L
Sbjct: 54 VVH--EGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHL 105
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 237 FLHAAELNQHEKTHSSVKDFVCGV*NKSFG--TQHNLEVHGIVHSREKPYVCGV--CEKA 404
F A L QH ++HS + F+C + + F + +L H + H + K + C + C +
Sbjct: 69 FQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH-QGKLFTCSMDGCGRK 127
Query: 405 FARRAEVRDHMR 440
F+ +A ++ H++
Sbjct: 128 FSIKANMQRHVK 139
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +2
Query: 470 RHVRRGVLAALQPDSHRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDT 649
+H+++ + L+ +H + C F + L HIKASH +P C
Sbjct: 222 KHLKKNIKRHLR--AHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKPFACRF 279
Query: 650 CGASFVYP 673
G V+P
Sbjct: 280 TGCEKVFP 287
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 118 GSHRCARCRKTFASKYTLQEHLKIHSD 198
G H C C +F L++H++ HSD
Sbjct: 58 GDHTCQECGASFQKPAHLKQHMQSHSD 84
>03_04_0187 - 18236041-18236643
Length = 200
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 103 TRAAGGSHRCARCRKTFASKYTLQEHLKIH 192
T + GG HRC+ C +TFA+ L H + H
Sbjct: 102 TTSGGGRHRCSVCHRTFATGQALGGHKRCH 131
>12_01_0454 + 3580332-3581714
Length = 460
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ CG+C K F R A +R HMR H E
Sbjct: 224 HFCGICGKGFKRDANLRMHMRGHGDE 249
>03_06_0607 + 35037467-35038624
Length = 385
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ CGVC K F R A +R HMR H E
Sbjct: 164 HFCGVCGKGFKRDANLRMHMRGHGEE 189
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 49 PQRTDYTTHFAEHSLKPRTRAAGGSHRCARCRKTFASKYTLQEHLK 186
P + T + S + ++ GGS C C KTF S+ LQ H K
Sbjct: 145 PAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSK 190
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGE-----RPLKCDTCGASFV 667
H+ R + CA C F RR+LE H++ H + L+C +C ++F+
Sbjct: 486 HKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQYLQYSTLLRCISCNSNFL 541
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Frame = +3
Query: 261 QHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGI-VHSRE-----KPYVCGVCEKAFARRAE 422
+ + TH S C + ++ F L +H VH +E + Y C VC +F R
Sbjct: 453 REDGTHPS-PGLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRV 511
Query: 423 VRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+ H++ G + T S SN
Sbjct: 512 LERHVQEKHGAQYLQYSTLLRCISCNSN 539
>07_03_1165 - 24459156-24460139
Length = 327
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 366 REKPYVCGVCEKAFARRAEVRDHMRTHTGE 455
RE + C +C K F R V HMR H E
Sbjct: 109 REASFPCHLCNKEFGSRKAVHGHMRVHHAE 138
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVC--GVC--- 395
KT + FVC + NK F NL++H H+ R++ YVC C
Sbjct: 40 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHH 99
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 100 DPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 138
>02_04_0316 - 21978330-21979397
Length = 355
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 369 EKPYVCGVCEKAFARRAEVRDHMRTHTGER 458
E + C +C K F R A +R HMR H G+R
Sbjct: 141 EHVHFCDICGKGFRRDANLRMHMRAH-GDR 169
>12_02_0916 - 24271151-24271894
Length = 247
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 109 AAGGSHRCARCRKTFASKYTLQEHLKIHSDRPRP 210
AA HRC+ C K FAS L H H P P
Sbjct: 86 AAAVEHRCSVCGKAFASYQALGGHKASHRKPPPP 119
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ C VC K F R A +R HMR H E
Sbjct: 258 HYCQVCGKGFKRDANLRMHMRAHGDE 283
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 333 HNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
H HGI KP++C C KAFA R + R H + + G + + C CG+ F + +L
Sbjct: 302 HYKRKHGI-----KPFMCRKCGKAFAVRGDWRTHEK-NCG-KLWYC-ACGSDFKHKRSL 352
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 255 LNQHEKTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDH 434
L H K +K F+C K+F + + H + K + C C F + ++DH
Sbjct: 299 LQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH--EKNCGKLWYC-ACGSDFKHKRSLKDH 355
Query: 435 MR 440
+R
Sbjct: 356 IR 357
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
KP+ C C K FA + + R H + + G+R F C CG+ F + +L
Sbjct: 296 KPFACRRCAKPFAVKGDWRTHEK-NCGKRWF-C-ACGSDFKHKRSL 338
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 294 FVCGV*NKSFGTQHNLEVHGIVHSRE 371
FVC V NK+F +N+++H H RE
Sbjct: 211 FVCHVCNKAFNRYNNMQMHMWGHGRE 236
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ C VC K F R A +R HMR H E
Sbjct: 322 HYCQVCGKGFKRDANLRMHMRAHGDE 347
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 55 RTDYTTHFAEHSLKPRTRAAGGSHRCARCRKTFASKYTLQEHLKIH 192
RTD + + P SHRC C K+F S L H++ H
Sbjct: 360 RTDNSDEEMKFGDLPAAAMKDNSHRCNTCGKSFGSGQALGGHMRRH 405
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 384 CGVCEKAFARRAEVRDHMRTHTGER 458
C +C K F+ +R+HM H GE+
Sbjct: 180 CQMCSKVFSTSGSLREHMMMHGGEK 204
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 515 HRSATHLNERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
H S H E+R C +C KR+ + H+K + G R +CD CG F
Sbjct: 114 HFSRKH-GEKRWRCERCGKRYAVHSDWKAHVK--NCGTREYRCD-CGILF 159
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS--------------REKPYVC--GVC-- 395
KT + FVC V NK F + NL++H H+ R + Y+C C
Sbjct: 87 KTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQAQRRRVYLCPEPTCVH 146
Query: 396 ---EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 147 HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSD 186
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS--------------REKPYVC--GVC-- 395
KT + FVC V NK F + NL++H H+ R + Y+C C
Sbjct: 35 KTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPAQAQRRRVYLCPEPTCVH 94
Query: 396 ---EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 95 HDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSD 134
>03_04_0188 - 18241815-18242477
Length = 220
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 109 AAG--GSHRCARCRKTFASKYTLQEHLKIH 192
AAG G HRC CR++FA+ L H + H
Sbjct: 128 AAGSTGPHRCTICRRSFATGQALGGHKRCH 157
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVH-------------SREKPYVCG--VCEKA 404
KT + ++C V +K F NL++H H +++K YVC C
Sbjct: 58 KTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVYVCPEITCPHH 117
Query: 405 FARRA-----EVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
A RA ++ H GE+ + CD C ++ +S+
Sbjct: 118 DATRALGDLTGIKKHYSRKHGEKKWKCDRCSKKYAVQSD 156
>01_06_1614 - 38648495-38649706
Length = 403
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGER 458
+ C VC K F R V HMR H ++
Sbjct: 105 FPCHVCSKEFGSRKAVHGHMRVHQADK 131
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
KP+ C C K FA + + R H + + G+R F C CG+ F + +L
Sbjct: 288 KPFRCRRCAKPFAVKGDWRTHEK-NCGKRWF-C-ACGSDFKHKRSL 330
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 294 FVCGV*NKSFGTQHNLEVHGIVHSRE 371
F+C V NK+F +N+++H H RE
Sbjct: 206 FICHVCNKTFNRYNNMQMHMWGHGRE 231
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
KP++C C KAFA + + R H + + G + + C CG+ F + +L
Sbjct: 355 KPFLCRKCGKAFAVKGDWRTHEK-NCG-KLWYC-LCGSEFKHKRSL 397
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
+PY C C K FA R + R H + + G+ F C CG+ F + +L
Sbjct: 277 RPYACRRCGKRFAVRGDWRTHEK-NCGKLWF-C-VCGSDFKHKRSL 319
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 423 VRDHMRTHTGERPFSCDTCGAAFSQRSN 506
++ H R G RP++C CG F+ R +
Sbjct: 266 LQTHYRRKHGARPYACRRCGKRFAVRGD 293
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
KP++C C KAFA + + R H + + G + + C CG+ F + +L
Sbjct: 350 KPFLCRKCGKAFAVKGDWRTHEK-NCG-KLWYC-LCGSEFKHKRSL 392
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 539 ERRHHCAQCPKRFKRRRLLEYHIKASHTGERPLKCDTCGASF 664
E+R C +C KR+ + L+ H K G R +CD CG F
Sbjct: 134 EKRWTCQRCGKRYAVQADLKAHTKT--CGTREYRCD-CGTLF 172
>05_05_0117 + 22503271-22503891
Length = 206
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 100 RTRAAGGSHRCARCRKTFASKYTLQEHLKIH 192
RTR AG +H C C FA L H++ H
Sbjct: 112 RTRGAGAAHGCPVCGLEFAVGQALGGHMRRH 142
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVCGV--C--- 395
+T + FVC V NK F + NL++H H+ R + Y+C C
Sbjct: 40 RTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPSCVHH 99
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 100 DPSRALGDLTGIKKHYCRKHGEKKWRCDKCSKRYAVQSD 138
>01_06_1495 + 37769982-37771496
Length = 504
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTGE 455
+ C +C K F R A +R HMR H E
Sbjct: 264 HFCLICGKGFKRDANLRMHMRGHGDE 289
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 372 KPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSNL 509
KP+ C C K A R + R H + + G R + C CG+ F + +L
Sbjct: 237 KPFACRKCGKPLAVRGDWRTHEK-NCGRR-WHC-ACGSDFKHKRSL 279
>06_03_1478 - 30420097-30420651
Length = 184
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTHTG 452
Y C +C++ F V HMR+H G
Sbjct: 56 YPCPLCDRHFPTEKAVHGHMRSHPG 80
>06_01_0135 + 1039018-1041474
Length = 818
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 461 VLVRHVRRGVLAALQP--DSHRSATHLNERRHHCAQCPKRFKR 583
+L+ H+ G+L L P D T + +R C CP + K+
Sbjct: 580 ILICHIATGLLERLNPPPDPEVMITESDSKRMSCCGCPNKKKK 622
>05_01_0382 + 2985526-2986659
Length = 377
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 45 CSAEDRLHHALRRALPEAADACGGRVAPLRALQEDLRLQVHA 170
C A +RL A+R A P AA CG A AL R HA
Sbjct: 175 CHALERLVDAIRVACPHAAHGCGATPA-YHALDAHRRACPHA 215
>04_01_0354 - 4646826-4647314
Length = 162
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 363 SREKPYVCGVCEKAFARRAEVRDHMRTHTGER 458
S Y CG C + F + HM H ER
Sbjct: 41 SSSSSYTCGYCRREFRSAQALGGHMNVHRRER 72
>02_05_0201 + 26687369-26689228
Length = 619
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 545 RHHCAQCPKRFKRRRLLEYHIKASHTGE 628
RHHC C K F R L H++A G+
Sbjct: 36 RHHCKVCKKGFMCGRALGGHMRAHGIGD 63
>11_04_0142 + 14027726-14029081
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 378 YVCGVCEKAFARRAEVRDHMRTH 446
+ C +C K F R V HMR H
Sbjct: 117 FACRICRKEFDTRKAVDGHMRVH 139
>08_01_0400 - 3538570-3540363,3540895-3541639,3543688-3544007
Length = 952
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 466 ENGRSPVCVLMW-SLTSALLANAFSHTPHTYGFSR 365
++G++PV VL+W + T + A + + PH +G R
Sbjct: 892 KHGKTPVVVLVWWAFTFVITAVLYINIPHIHGPGR 926
>07_03_1095 + 23926977-23927657
Length = 226
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 100 RTRAAGGSHRCARCRKTFASKYTLQEHLKIH 192
RT G H+C+ CR F S L H+++H
Sbjct: 136 RTMVVKG-HKCSICRLEFPSGQALGGHMRVH 165
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 279 SSVKDFVCGV*NKSFGTQHNLEVHGIVHSREKPYVCGVCEKAFARRAEVRDH 434
+S + + C +K+F T L H H R+K ++A A A+V H
Sbjct: 458 ASKRKYECSECHKTFSTHQALGGHVAAHKRQKKSCAEQQQEAVAAAAQVARH 509
>03_05_0291 - 22837412-22838128
Length = 238
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 124 HRCARCRKTFASKYTLQEHLKIHSDRP 204
H C+ C+KTF + L H + H + P
Sbjct: 155 HECSVCKKTFPTGQALGGHKRCHYEGP 181
>02_05_0944 +
32980540-32980788,32980873-32981283,32981383-32981460,
32981551-32982318
Length = 501
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 354 IVHSREKPYVCGVCEKAFARRAEVRDHMRTHTGERPFSCDTCG 482
+V ++KPY + KA + H T+ GE PF C G
Sbjct: 202 MVFRKDKPYSRRLLNKAKLLFQFAKTHQGTYDGECPFYCSYSG 244
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 20/99 (20%)
Frame = +3
Query: 270 KTHSSVKDFVCGV*NKSFGTQHNLEVHGIVHS-------------REKPYVC--GVC--- 395
+T + FVC + K F NL++H H+ R++ YVC C
Sbjct: 17 RTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHH 76
Query: 396 --EKAFARRAEVRDHMRTHTGERPFSCDTCGAAFSQRSN 506
+A ++ H GE+ + CD C ++ +S+
Sbjct: 77 NPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSD 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,805
Number of Sequences: 37544
Number of extensions: 248421
Number of successful extensions: 1191
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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